RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 NAT10Q9H0A0 1025 aaKnown RBP14.43□□□□□ -0.1
EIF3A-203ENST00000541549 CCDC192P0DO97 292 aa14.43□□□□□ -0.1
EIF3A-203ENST00000541549 RARSP54136 660 aaKnown RBP14.43□□□□□ -0.1
EIF3A-203ENST00000541549 ERBINQ96RT1 1412 aa14.43□□□□□ -0.1
EIF3A-203ENST00000541549 ANKRD20A12PQ8NF67 263 aa14.43□□□□□ -0.1
EIF3A-203ENST00000541549 SMC2O95347 1197 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 PSMA5P28066 241 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 XPCQ01831 940 aaPredicted RBP14.42□□□□□ -0.1
EIF3A-203ENST00000541549 TTC5Q8N0Z6 440 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 GNAI2P04899 355 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 CT47B1P0C2W7 299 aaPredicted RBP14.42□□□□□ -0.1
EIF3A-203ENST00000541549 GTF2E1P29083 439 aaPredicted RBP14.42□□□□□ -0.1
EIF3A-203ENST00000541549 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 DUSP27Q5VZP5 1158 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 CCDC112Q8NEF3 446 aa14.42□□□□□ -0.1
EIF3A-203ENST00000541549 RALYLQ86SE5 291 aaKnown RBP14.41□□□□□ -0.1
EIF3A-203ENST00000541549 HOOK1Q9UJC3 728 aaKnown RBP14.41□□□□□ -0.1
EIF3A-203ENST00000541549 CCDC66A2RUB6 948 aa14.41□□□□□ -0.1
EIF3A-203ENST00000541549 KDM4AO75164 1064 aa14.41□□□□□ -0.1
EIF3A-203ENST00000541549 NUTM2GQ5VZR2 741 aa14.41□□□□□ -0.1
EIF3A-203ENST00000541549 TTLL5Q6EMB2 1281 aa14.41□□□□□ -0.1
EIF3A-203ENST00000541549 TNPO1Q92973 898 aaKnown RBP14.41□□□□□ -0.1
EIF3A-203ENST00000541549 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
EIF3A-203ENST00000541549 MAP4K4O95819 1239 aaPredicted RBP14.4□□□□□ -0.1
EIF3A-203ENST00000541549 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
EIF3A-203ENST00000541549 SSFA2P28290 1259 aa14.4□□□□□ -0.1
EIF3A-203ENST00000541549 SSH1Q8WYL5 1049 aa14.4□□□□□ -0.1
EIF3A-203ENST00000541549 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.14e-7■■■■□ 21.5
EIF3A-203ENST00000541549 STK3Q13188 491 aa14.4□□□□□ -0.1
EIF3A-203ENST00000541549 WASHC4Q2M389 1173 aa14.4□□□□□ -0.1
EIF3A-203ENST00000541549 ATP2B1P20020 1258 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 RIC3Q7Z5B4 369 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 CEP89Q96ST8 783 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 TNMDQ9H2S6 317 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 PATL2C9JE40 543 aaKnown RBP14.39□□□□□ -0.11
EIF3A-203ENST00000541549 IGHDP01880 384 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 SULT6B1Q6IMI4 303 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 ZNF428Q96B54 188 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 THUMPD2Q9BTF0 503 aaKnown RBP14.39□□□□□ -0.11
EIF3A-203ENST00000541549 PRDM10Q9NQV6 1147 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 LRRCC1Q9C099 1032 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 ANKRD30BQ9BXX2 1392 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 KRT85P78386 507 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 NCOA1Q15788 1441 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 CCDC30Q5VVM6 783 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 IL1RAPL2Q9NP60 686 aa14.39□□□□□ -0.11
EIF3A-203ENST00000541549 LARP1BQ659C4 914 aaKnown RBP14.38□□□□□ -0.11
EIF3A-203ENST00000541549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.38□□□□□ -0.11
EIF3A-203ENST00000541549 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
EIF3A-203ENST00000541549 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
EIF3A-203ENST00000541549 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
EIF3A-203ENST00000541549 SAFBQ15424 915 aaKnown RBP eCLIP14.38□□□□□ -0.11
EIF3A-203ENST00000541549 VPS53Q5VIR6 699 aa14.38□□□□□ -0.11
EIF3A-203ENST00000541549 C9orf84Q5VXU9 1444 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 OLFM4Q6UX06 510 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 PANK2Q9BZ23 570 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 CABP1Q9NZU7 370 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 EXOC6BQ9Y2D4 811 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 PRG4Q92954 1404 aaPredicted RBP14.37□□□□□ -0.11
EIF3A-203ENST00000541549 NLRP6P59044 892 aa14.37□□□□□ -0.11
EIF3A-203ENST00000541549 FERMT3Q86UX7 667 aa14.36□□□□□ -0.11
EIF3A-203ENST00000541549 DNAJC2Q99543 621 aaKnown RBP14.36□□□□□ -0.11
EIF3A-203ENST00000541549 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
EIF3A-203ENST00000541549 FAM177A1Q8N128 213 aaPredicted RBP14.35□□□□□ -0.11
EIF3A-203ENST00000541549 PDCL2Q8N4E4 241 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 LRPPRCP42704 1394 aaKnown RBP14.35□□□□□ -0.11
EIF3A-203ENST00000541549 XRCC6P12956 609 aaKnown RBP eCLIP14.35□□□□□ -0.11
EIF3A-203ENST00000541549 ME1P48163 572 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 STK38Q15208 465 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 CBX1P83916 185 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 TBC1D32Q96NH3 1257 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 RUFY1Q96T51 708 aa14.35□□□□□ -0.11
EIF3A-203ENST00000541549 DAPK1P53355 1430 aa14.34□□□□□ -0.11
EIF3A-203ENST00000541549 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
EIF3A-203ENST00000541549 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
EIF3A-203ENST00000541549 CWC27Q6UX04 472 aaKnown RBP14.34□□□□□ -0.11
EIF3A-203ENST00000541549 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
EIF3A-203ENST00000541549 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.11
EIF3A-203ENST00000541549 NOM1Q5C9Z4 860 aaKnown RBP14.33□□□□□ -0.11
EIF3A-203ENST00000541549 SMARCA5O60264 1052 aaPredicted RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 NAP1L1P55209 391 aaKnown RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 RPAP2Q8IXW5 612 aaPredicted RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 BRPF1P55201 1214 aaPredicted RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
EIF3A-203ENST00000541549 JAKMIP1Q96N16 626 aaKnown RBP14.33□□□□□ -0.12
EIF3A-203ENST00000541549 GDPD2Q9HCC8 539 aa14.33□□□□□ -0.12
EIF3A-203ENST00000541549 USP25Q9UHP3 1055 aa14.33□□□□□ -0.12
EIF3A-203ENST00000541549 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
EIF3A-203ENST00000541549 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 ZMYND15Q9H091 742 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 TRIM27P14373 513 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 PSME1Q06323 249 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 SPATA32Q96LK8 384 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 ERICH2A1L162 156 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 SERPINC1P01008 464 aa14.32□□□□□ -0.12
EIF3A-203ENST00000541549 GAS2L2Q8NHY3 880 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms