RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 RETREG3Q86VR2 466 aa10.28□□□□□ -0.76
RAP1B-224ENST00000541216 FOXK2Q01167 660 aa10.27□□□□□ -0.77
RAP1B-224ENST00000541216 CCNYL3P0C7X3 344 aa10.26□□□□□ -0.77
RAP1B-224ENST00000541216 XP32Q5T750 250 aa10.24□□□□□ -0.77
RAP1B-224ENST00000541216 BARGINQ6ZT62 677 aa10.24□□□□□ -0.77
RAP1B-224ENST00000541216 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
RAP1B-224ENST00000541216 CNTNAP3BQ96NU0 1288 aa10.24□□□□□ -0.77
RAP1B-224ENST00000541216 CNTNAP3Q9BZ76 1288 aa10.24□□□□□ -0.77
RAP1B-224ENST00000541216 MS4A1P11836 297 aa10.23□□□□□ -0.77
RAP1B-224ENST00000541216 KLF16Q9BXK1 252 aaPredicted RBP10.23□□□□□ -0.77
RAP1B-224ENST00000541216 UNC93B1Q9H1C4 597 aa10.23□□□□□ -0.77
RAP1B-224ENST00000541216 UPP2O95045 317 aa10.22□□□□□ -0.77
RAP1B-224ENST00000541216 LINC01559Q495D7 138 aa10.22□□□□□ -0.77
RAP1B-224ENST00000541216 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
RAP1B-224ENST00000541216 BAP1Q92560 729 aa10.22□□□□□ -0.77
RAP1B-224ENST00000541216 IRS1P35568 1242 aa10.21□□□□□ -0.77
RAP1B-224ENST00000541216 GUCA2AQ02747 115 aa10.21□□□□□ -0.77
RAP1B-224ENST00000541216 C6orf118Q5T5N4 469 aa10.21□□□□□ -0.77
RAP1B-224ENST00000541216 EVA1BQ9NVM1 165 aa10.21□□□□□ -0.77
RAP1B-224ENST00000541216 KRT76Q01546 638 aa10.2□□□□□ -0.78
RAP1B-224ENST00000541216 PTPRNQ16849 979 aa10.2□□□□□ -0.78
RAP1B-224ENST00000541216 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
RAP1B-224ENST00000541216 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
RAP1B-224ENST00000541216 ZIC2O95409 532 aaPredicted RBP10.19□□□□□ -0.78
RAP1B-224ENST00000541216 FAM174AQ8TBP5 190 aa10.19□□□□□ -0.78
RAP1B-224ENST00000541216 BMP2P12643 396 aa10.18□□□□□ -0.78
RAP1B-224ENST00000541216 MARSP56192 900 aaKnown RBP10.17□□□□□ -0.78
RAP1B-224ENST00000541216 KCNH2Q12809 1159 aa10.17□□□□□ -0.78
RAP1B-224ENST00000541216 ZNF385CQ66K41 422 aaPredicted RBP10.17□□□□□ -0.78
RAP1B-224ENST00000541216 GPR161Q8N6U8 529 aaKnown RBP10.17□□□□□ -0.78
RAP1B-224ENST00000541216 MAP2K5Q13163 448 aa10.16□□□□□ -0.78
RAP1B-224ENST00000541216 COL25A1Q9BXS0 654 aaPredicted RBP10.16□□□□□ -0.78
RAP1B-224ENST00000541216 C6orf229H3BNL8 230 aa10.15□□□□□ -0.78
RAP1B-224ENST00000541216 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
RAP1B-224ENST00000541216 SCARF2Q96GP6 870 aaPredicted RBP10.15□□□□□ -0.78
RAP1B-224ENST00000541216 CDK15Q96Q40 435 aa10.15□□□□□ -0.78
RAP1B-224ENST00000541216 ZFAND3Q9H8U3 227 aa10.15□□□□□ -0.78
RAP1B-224ENST00000541216 MINK1Q8N4C8 1332 aaPredicted RBP10.14□□□□□ -0.79
RAP1B-224ENST00000541216 ITPKCQ96DU7 683 aa10.14□□□□□ -0.79
RAP1B-224ENST00000541216 SOS2Q07890 1332 aaPredicted RBP10.13□□□□□ -0.79
RAP1B-224ENST00000541216 IRF6O14896 467 aa10.13□□□□□ -0.79
RAP1B-224ENST00000541216 MDM2Q00987 491 aaPredicted RBP10.13□□□□□ -0.79
RAP1B-224ENST00000541216 NR5A1Q13285 461 aa10.13□□□□□ -0.79
RAP1B-224ENST00000541216 LINC00528Q8N1L1 170 aa10.13□□□□□ -0.79
RAP1B-224ENST00000541216 SLC24A3Q9HC58 644 aa10.13□□□□□ -0.79
RAP1B-224ENST00000541216 FDX1P10109 184 aa10.12□□□□□ -0.79
RAP1B-224ENST00000541216 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.12□□□□□ -0.79
RAP1B-224ENST00000541216 NANOS1Q8WY41 292 aaKnown RBP10.12□□□□□ -0.79
RAP1B-224ENST00000541216 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
RAP1B-224ENST00000541216 SPTLC1O15269 473 aa10.11□□□□□ -0.79
RAP1B-224ENST00000541216 ARHGEF15O94989 841 aa10.11□□□□□ -0.79
RAP1B-224ENST00000541216 ARID5BQ14865 1188 aa10.11□□□□□ -0.79
RAP1B-224ENST00000541216 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
RAP1B-224ENST00000541216 SLURP2P0DP57 97 aa10.1□□□□□ -0.79
RAP1B-224ENST00000541216 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
RAP1B-224ENST00000541216 ADAM23O75077 832 aa10.09□□□□□ -0.79
RAP1B-224ENST00000541216 MEIOBQ8N635 442 aa10.09□□□□□ -0.79
RAP1B-224ENST00000541216 AK7Q96M32 723 aa10.09□□□□□ -0.79
RAP1B-224ENST00000541216 MSTNO14793 375 aa10.07□□□□□ -0.8
RAP1B-224ENST00000541216 PTSQ03393 145 aa10.07□□□□□ -0.8
RAP1B-224ENST00000541216 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
RAP1B-224ENST00000541216 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
RAP1B-224ENST00000541216 TRIM66O15016 1216 aa10.06□□□□□ -0.8
RAP1B-224ENST00000541216 WHAMMQ8TF30 809 aa10.06□□□□□ -0.8
RAP1B-224ENST00000541216 PCDHGC3Q9UN70 934 aa10.06□□□□□ -0.8
RAP1B-224ENST00000541216 NR3C2P08235 984 aa10.05□□□□□ -0.8
RAP1B-224ENST00000541216 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
RAP1B-224ENST00000541216 KRTAP4-8Q9BYQ9 185 aa10.05□□□□□ -0.8
RAP1B-224ENST00000541216 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
RAP1B-224ENST00000541216 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
RAP1B-224ENST00000541216 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
RAP1B-224ENST00000541216 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
RAP1B-224ENST00000541216 CLCN1P35523 988 aa10.03□□□□□ -0.8
RAP1B-224ENST00000541216 FAM217BQ9NTX9 383 aaPredicted RBP10.03□□□□□ -0.8
RAP1B-224ENST00000541216 CTHP32929 405 aa10.02□□□□□ -0.81
RAP1B-224ENST00000541216 GRM5P41594 1212 aa10.02□□□□□ -0.81
RAP1B-224ENST00000541216 AMHR2Q16671 573 aa10.02□□□□□ -0.81
RAP1B-224ENST00000541216 CCDC155Q8N6L0 562 aa10.02□□□□□ -0.81
RAP1B-224ENST00000541216 FOXJ1Q92949 421 aa10.02□□□□□ -0.81
RAP1B-224ENST00000541216 MAP3K10Q02779 954 aa10.01□□□□□ -0.81
RAP1B-224ENST00000541216 SV2AQ7L0J3 742 aa10.01□□□□□ -0.81
RAP1B-224ENST00000541216 AGERQ15109 404 aa9.99□□□□□ -0.81
RAP1B-224ENST00000541216 PDE4DQ08499 809 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 MTMR2Q13614 643 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 PLA2G4EQ3MJ16 856 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 VWA5B2Q8N398 1253 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 ENAMQ9NRM1 1142 aa9.98□□□□□ -0.81
RAP1B-224ENST00000541216 FIGNL2A6NMB9 653 aa9.97□□□□□ -0.81
RAP1B-224ENST00000541216 PHF20L1A8MW92 1017 aa9.97□□□□□ -0.81
RAP1B-224ENST00000541216 BRPF1P55201 1214 aaPredicted RBP9.97□□□□□ -0.81
RAP1B-224ENST00000541216 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
RAP1B-224ENST00000541216 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
RAP1B-224ENST00000541216 CDC14CA4D256 554 aa9.96□□□□□ -0.82
RAP1B-224ENST00000541216 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
RAP1B-224ENST00000541216 ITGA6P23229 1130 aa9.96□□□□□ -0.82
RAP1B-224ENST00000541216 ADAMTS2O95450 1211 aa9.95□□□□□ -0.82
RAP1B-224ENST00000541216 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
RAP1B-224ENST00000541216 PARP9Q8IXQ6 854 aa9.95□□□□□ -0.82
RAP1B-224ENST00000541216 GALNT6Q8NCL4 622 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms