RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 NNTQ13423 1086 aa13.3□□□□□ -0.28
SMCO2-205ENST00000541168 RSBN1LQ6PCB5 846 aaPredicted RBP13.3□□□□□ -0.28
SMCO2-205ENST00000541168 CTHP32929 405 aa13.29□□□□□ -0.28
SMCO2-205ENST00000541168 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
SMCO2-205ENST00000541168 MPNDQ8N594 471 aa13.29□□□□□ -0.28
SMCO2-205ENST00000541168 LYPD8Q6UX82 237 aa13.28□□□□□ -0.28
SMCO2-205ENST00000541168 PARP9Q8IXQ6 854 aa13.28□□□□□ -0.28
SMCO2-205ENST00000541168 NPAS3Q8IXF0 933 aa13.27□□□□□ -0.29
SMCO2-205ENST00000541168 ZFP42Q96MM3 310 aa13.27□□□□□ -0.29
SMCO2-205ENST00000541168 CFAP99D6REC4 459 aa13.26□□□□□ -0.29
SMCO2-205ENST00000541168 PCDHB15Q9Y5E8 787 aa13.26□□□□□ -0.29
SMCO2-205ENST00000541168 NISCHQ9Y2I1 1504 aa13.25□□□□□ -0.29
SMCO2-205ENST00000541168 SPTLC1O15269 473 aa13.24□□□□□ -0.29
SMCO2-205ENST00000541168 ADH1CP00326 375 aa13.24□□□□□ -0.29
SMCO2-205ENST00000541168 FAM174AQ8TBP5 190 aa13.24□□□□□ -0.29
SMCO2-205ENST00000541168 IRF7Q92985 503 aa13.24□□□□□ -0.29
SMCO2-205ENST00000541168 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
SMCO2-205ENST00000541168 TIMP2P16035 220 aa13.23□□□□□ -0.29
SMCO2-205ENST00000541168 HRCP23327 699 aa13.23□□□□□ -0.29
SMCO2-205ENST00000541168 GMPRP36959 345 aa13.23□□□□□ -0.29
SMCO2-205ENST00000541168 VEGFBP49765 207 aa13.23□□□□□ -0.29
SMCO2-205ENST00000541168 WDR4P57081 412 aaKnown RBP13.23□□□□□ -0.29
SMCO2-205ENST00000541168 MRPL14Q6P1L8 145 aaKnown RBP13.23□□□□□ -0.29
SMCO2-205ENST00000541168 MAP10Q9P2G4 905 aa13.23□□□□□ -0.29
SMCO2-205ENST00000541168 H3BM21 787 aa13.22□□□□□ -0.29
SMCO2-205ENST00000541168 TRIM66O15016 1216 aa13.21□□□□□ -0.29
SMCO2-205ENST00000541168 F12P00748 615 aaPredicted RBP13.21□□□□□ -0.29
SMCO2-205ENST00000541168 SCARF1Q14162 830 aa13.21□□□□□ -0.29
SMCO2-205ENST00000541168 FOXJ1Q92949 421 aa13.2□□□□□ -0.3
SMCO2-205ENST00000541168 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
SMCO2-205ENST00000541168 RIC3Q7Z5B4 369 aa13.19□□□□□ -0.3
SMCO2-205ENST00000541168 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
SMCO2-205ENST00000541168 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
SMCO2-205ENST00000541168 CDK15Q96Q40 435 aa13.18□□□□□ -0.3
SMCO2-205ENST00000541168 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
SMCO2-205ENST00000541168 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
SMCO2-205ENST00000541168 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
SMCO2-205ENST00000541168 ERBB4Q15303 1308 aa13.16□□□□□ -0.3
SMCO2-205ENST00000541168 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
SMCO2-205ENST00000541168 AK7Q96M32 723 aa13.15□□□□□ -0.3
SMCO2-205ENST00000541168 AGERQ15109 404 aa13.14□□□□□ -0.31
SMCO2-205ENST00000541168 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
SMCO2-205ENST00000541168 PER1O15534 1290 aaPredicted RBP13.13□□□□□ -0.31
SMCO2-205ENST00000541168 ZIC2O95409 532 aaPredicted RBP13.13□□□□□ -0.31
SMCO2-205ENST00000541168 SOBPA7XYQ1 873 aa13.12□□□□□ -0.31
SMCO2-205ENST00000541168 LORP23490 312 aaPredicted RBP13.12□□□□□ -0.31
SMCO2-205ENST00000541168 C4orf48Q5BLP8 95 aa13.12□□□□□ -0.31
SMCO2-205ENST00000541168 BPHLQ86WA6 291 aaPredicted RBP13.12□□□□□ -0.31
SMCO2-205ENST00000541168 TSC1Q92574 1164 aa13.12□□□□□ -0.31
SMCO2-205ENST00000541168 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
SMCO2-205ENST00000541168 NR3C2P08235 984 aa13.11□□□□□ -0.31
SMCO2-205ENST00000541168 NR5A1Q13285 461 aa13.11□□□□□ -0.31
SMCO2-205ENST00000541168 ITPKCQ96DU7 683 aa13.11□□□□□ -0.31
SMCO2-205ENST00000541168 LIMD1Q9UGP4 676 aa13.11□□□□□ -0.31
SMCO2-205ENST00000541168 MYSM1Q5VVJ2 828 aa13.1□□□□□ -0.31
SMCO2-205ENST00000541168 QPCTQ16769 361 aa13.09□□□□□ -0.31
SMCO2-205ENST00000541168 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
SMCO2-205ENST00000541168 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
SMCO2-205ENST00000541168 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
SMCO2-205ENST00000541168 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
SMCO2-205ENST00000541168 GRM5P41594 1212 aa13.07□□□□□ -0.32
SMCO2-205ENST00000541168 C6orf118Q5T5N4 469 aa13.07□□□□□ -0.32
SMCO2-205ENST00000541168 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
SMCO2-205ENST00000541168 TUSC1Q2TAM9 212 aa13.06□□□□□ -0.32
SMCO2-205ENST00000541168 MAN1A2O60476 641 aa13.05□□□□□ -0.32
SMCO2-205ENST00000541168 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
SMCO2-205ENST00000541168 PDE4DQ08499 809 aa13.05□□□□□ -0.32
SMCO2-205ENST00000541168 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
SMCO2-205ENST00000541168 LILRB3O75022 631 aa13.04□□□□□ -0.32
SMCO2-205ENST00000541168 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
SMCO2-205ENST00000541168 HELBQ8NG08 1087 aaPredicted RBP13.04□□□□□ -0.32
SMCO2-205ENST00000541168 FSHRP23945 695 aa13.03□□□□□ -0.32
SMCO2-205ENST00000541168 SH3RF1Q7Z6J0 888 aa13.03□□□□□ -0.32
SMCO2-205ENST00000541168 LINC00528Q8N1L1 170 aa13.03□□□□□ -0.32
SMCO2-205ENST00000541168 MEIOBQ8N635 442 aa13.03□□□□□ -0.32
SMCO2-205ENST00000541168 UPP2O95045 317 aa13.02□□□□□ -0.33
SMCO2-205ENST00000541168 BMP2P12643 396 aa13.02□□□□□ -0.33
SMCO2-205ENST00000541168 MAP4K5Q9Y4K4 846 aa13.01□□□□□ -0.33
SMCO2-205ENST00000541168 SH3BP5LQ7L8J4 393 aa13□□□□□ -0.33
SMCO2-205ENST00000541168 MAGEB6P1A0A0J9YX57 407 aa12.99□□□□□ -0.33
SMCO2-205ENST00000541168 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
SMCO2-205ENST00000541168 VASH1Q7L8A9 365 aaPredicted RBP12.99□□□□□ -0.33
SMCO2-205ENST00000541168 TRMT44Q8IYL2 757 aaKnown RBP12.99□□□□□ -0.33
SMCO2-205ENST00000541168 CLK2P49760 499 aaKnown RBP12.98□□□□□ -0.33
SMCO2-205ENST00000541168 CARD14Q9BXL6 1004 aa12.96□□□□□ -0.33
SMCO2-205ENST00000541168 SOS2Q07890 1332 aaPredicted RBP12.95□□□□□ -0.34
SMCO2-205ENST00000541168 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
SMCO2-205ENST00000541168 EMILIN1Q9Y6C2 1016 aa12.95□□□□□ -0.34
SMCO2-205ENST00000541168 CCDC116Q8IYX3 515 aa12.94□□□□□ -0.34
SMCO2-205ENST00000541168 GPKOWQ92917 476 aaPredicted RBP eCLIP12.94□□□□□ -0.34
SMCO2-205ENST00000541168 SLC24A3Q9HC58 644 aa12.94□□□□□ -0.34
SMCO2-205ENST00000541168 DNMT3LQ9UJW3 386 aa12.94□□□□□ -0.34
SMCO2-205ENST00000541168 TSEN34Q9BSV6 310 aaKnown RBP12.93□□□□□ -0.34
SMCO2-205ENST00000541168 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
SMCO2-205ENST00000541168 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
SMCO2-205ENST00000541168 POLR3EQ9NVU0 708 aa12.91□□□□□ -0.34
SMCO2-205ENST00000541168 TTLL8A6PVC2 850 aa12.87□□□□□ -0.35
SMCO2-205ENST00000541168 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
SMCO2-205ENST00000541168 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.86□□□□□ -0.35
SMCO2-205ENST00000541168 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms