RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
TCF4-207ENST00000540999 TMF1P82094 1093 aa11.38□□□□□ -0.59
TCF4-207ENST00000540999 C1orf115Q9H7X2 142 aa11.38□□□□□ -0.59
TCF4-207ENST00000540999 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
TCF4-207ENST00000540999 KCTD17Q8N5Z5 321 aa11.37□□□□□ -0.59
TCF4-207ENST00000540999 TMTC2Q8N394 836 aa11.37□□□□□ -0.59
TCF4-207ENST00000540999 A2ML1A8K2U0 1454 aa11.37□□□□□ -0.59
TCF4-207ENST00000540999 STK26Q9P289 416 aa11.36□□□□□ -0.59
TCF4-207ENST00000540999 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
TCF4-207ENST00000540999 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
TCF4-207ENST00000540999 SH3BP1Q9Y3L3 701 aa11.36□□□□□ -0.59
TCF4-207ENST00000540999 SAFB2Q14151 953 aaKnown RBP eCLIP11.35□□□□□ -0.59
TCF4-207ENST00000540999 PANK3Q9H999 370 aa11.35□□□□□ -0.59
TCF4-207ENST00000540999 TNRQ92752 1358 aa11.35□□□□□ -0.59
TCF4-207ENST00000540999 SETBP1Q9Y6X0 1596 aa11.34□□□□□ -0.59
TCF4-207ENST00000540999 EIF3AQ14152 1382 aaKnown RBP11.34□□□□□ -0.59
TCF4-207ENST00000540999 PDCL3Q9H2J4 239 aa11.34□□□□□ -0.59
TCF4-207ENST00000540999 ASXL1Q8IXJ9 1541 aa11.33□□□□□ -0.59
TCF4-207ENST00000540999 PER1O15534 1290 aaPredicted RBP11.33□□□□□ -0.6
TCF4-207ENST00000540999 ZFYVE9O95405 1425 aa11.33□□□□□ -0.6
TCF4-207ENST00000540999 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
TCF4-207ENST00000540999 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.6
TCF4-207ENST00000540999 C3P01024 1663 aa11.32□□□□□ -0.6
TCF4-207ENST00000540999 HSP90AB4PQ58FF6 505 aa11.32□□□□□ -0.6
TCF4-207ENST00000540999 CC2D1BQ5T0F9 858 aaKnown RBP11.32□□□□□ -0.6
TCF4-207ENST00000540999 EGFL6Q8IUX8 553 aa11.31□□□□□ -0.6
TCF4-207ENST00000540999 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
TCF4-207ENST00000540999 CARD10Q9BWT7 1032 aa11.31□□□□□ -0.6
TCF4-207ENST00000540999 QRICH2Q9H0J4 1663 aa11.31□□□□□ -0.6
TCF4-207ENST00000540999 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
TCF4-207ENST00000540999 SGSM3Q96HU1 749 aa11.3□□□□□ -0.6
TCF4-207ENST00000540999 ARHGEF28Q8N1W1 1705 aaKnown RBP11.3□□□□□ -0.6
TCF4-207ENST00000540999 MYO3AQ8NEV4 1616 aa11.3□□□□□ -0.6
TCF4-207ENST00000540999 MYOM1P52179 1685 aa11.3□□□□□ -0.6
TCF4-207ENST00000540999 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
TCF4-207ENST00000540999 UBR1Q8IWV7 1749 aa11.29□□□□□ -0.6
TCF4-207ENST00000540999 PTPRMP28827 1452 aa11.29□□□□□ -0.6
TCF4-207ENST00000540999 SENP3-EIF4A1A0A087X0R7 540 aa11.28□□□□□ -0.6
TCF4-207ENST00000540999 KDM5AP29375 1690 aaKnown RBP11.28□□□□□ -0.6
TCF4-207ENST00000540999 LTKP29376 864 aa11.28□□□□□ -0.6
TCF4-207ENST00000540999 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
TCF4-207ENST00000540999 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.6
TCF4-207ENST00000540999 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.6
TCF4-207ENST00000540999 NBPF11Q86T75 865 aa11.27□□□□□ -0.6
TCF4-207ENST00000540999 PRAM1Q96QH2 718 aa11.27□□□□□ -0.6
TCF4-207ENST00000540999 SEMA3FQ13275 785 aa11.27□□□□□ -0.61
TCF4-207ENST00000540999 MPNDQ8N594 471 aa11.27□□□□□ -0.61
TCF4-207ENST00000540999 NRXN3Q9Y4C0 1643 aa11.27□□□□□ -0.61
TCF4-207ENST00000540999 WAPLQ7Z5K2 1190 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
TCF4-207ENST00000540999 METP08581 1390 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 TMEM2Q9UHN6 1383 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 TTC36A6NLP5 189 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 SMAP1Q8IYB5 467 aaPredicted RBP11.26□□□□□ -0.61
TCF4-207ENST00000540999 EXOC8Q8IYI6 725 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 CEP120Q8N960 986 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 SLC12A5Q9H2X9 1139 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
TCF4-207ENST00000540999 RIMS1Q86UR5 1692 aaKnown RBP11.26□□□□□ -0.61
TCF4-207ENST00000540999 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
TCF4-207ENST00000540999 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 ZHX1Q9UKY1 873 aaPredicted RBP11.25□□□□□ -0.61
TCF4-207ENST00000540999 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 IRF6O14896 467 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
TCF4-207ENST00000540999 NGEFQ8N5V2 710 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
TCF4-207ENST00000540999 TULP4Q9NRJ4 1543 aa11.25□□□□□ -0.61
TCF4-207ENST00000540999 PPP4R3BQ5MIZ7 849 aa11.24□□□□□ -0.61
TCF4-207ENST00000540999 POGKQ9P215 609 aa11.24□□□□□ -0.61
TCF4-207ENST00000540999 KTN1Q86UP2 1357 aaKnown RBP11.24□□□□□ -0.61
TCF4-207ENST00000540999 PLEKHH1Q9ULM0 1364 aa11.24□□□□□ -0.61
TCF4-207ENST00000540999 KNSTRNQ9Y448 316 aa11.24□□□□□ -0.61
TCF4-207ENST00000540999 PARD3Q8TEW0 1356 aa11.24□□□□□ -0.61
TCF4-207ENST00000540999 E9PSI1 815 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
TCF4-207ENST00000540999 NLRP1Q9C000 1473 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 MYBBP1AQ9BQG0 1328 aaKnown RBP11.23□□□□□ -0.61
TCF4-207ENST00000540999 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
TCF4-207ENST00000540999 DDRGK1Q96HY6 314 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 SLC26A8Q96RN1 970 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 RALBP1Q15311 655 aa11.23□□□□□ -0.61
TCF4-207ENST00000540999 EVC2Q86UK5 1308 aa11.22□□□□□ -0.61
TCF4-207ENST00000540999 PIAS4Q8N2W9 510 aaPredicted RBP11.22□□□□□ -0.61
TCF4-207ENST00000540999 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
TCF4-207ENST00000540999 DNTTIP2Q5QJE6 756 aaKnown RBP11.21□□□□□ -0.61
TCF4-207ENST00000540999 UTP14CQ5TAP6 766 aaKnown RBP11.21□□□□□ -0.61
TCF4-207ENST00000540999 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.62
TCF4-207ENST00000540999 ADAMTS13Q76LX8 1427 aa11.2□□□□□ -0.62
TCF4-207ENST00000540999 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
TCF4-207ENST00000540999 LRPPRCP42704 1394 aaKnown RBP11.2□□□□□ -0.62
TCF4-207ENST00000540999 ADAMTSL3P82987 1691 aa11.2□□□□□ -0.62
TCF4-207ENST00000540999 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
TCF4-207ENST00000540999 CDK19Q9BWU1 502 aa11.19□□□□□ -0.62
TCF4-207ENST00000540999 RINLQ6ZS11 566 aa11.18□□□□□ -0.62
TCF4-207ENST00000540999 NLRP13Q86W25 1043 aa11.18□□□□□ -0.62
TCF4-207ENST00000540999 EID1Q9Y6B2 187 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms