RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 PRAM1Q96QH2 718 aa21.52■■□□□ 1.04
CACNB3-203ENST00000540990 RWDD1Q9H446 243 aaPredicted RBP21.52■■□□□ 1.04
CACNB3-203ENST00000540990 TNNQ9UQP3 1299 aa21.52■■□□□ 1.04
CACNB3-203ENST00000540990 GGNBP2Q9H3C7 697 aa21.5■■□□□ 1.03
CACNB3-203ENST00000540990 KIF20BQ96Q89 1820 aa21.5■■□□□ 1.03
CACNB3-203ENST00000540990 SLC4A3P48751 1232 aa21.5■■□□□ 1.03
CACNB3-203ENST00000540990 PNNQ9H307 717 aaKnown RBP21.5■■□□□ 1.03
CACNB3-203ENST00000540990 STK26Q9P289 416 aa21.5■■□□□ 1.03
CACNB3-203ENST00000540990 ATP7BP35670 1465 aa21.49■■□□□ 1.03
CACNB3-203ENST00000540990 SAFB2Q14151 953 aaKnown RBP eCLIP21.48■■□□□ 1.03
CACNB3-203ENST00000540990 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
CACNB3-203ENST00000540990 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
CACNB3-203ENST00000540990 PDZRN3Q9UPQ7 1066 aa21.48■■□□□ 1.03
CACNB3-203ENST00000540990 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
CACNB3-203ENST00000540990 MINK1Q8N4C8 1332 aaPredicted RBP21.47■■□□□ 1.03
CACNB3-203ENST00000540990 SETD1AO15047 1707 aaKnown RBP21.47■■□□□ 1.03
CACNB3-203ENST00000540990 BCL2L13Q9BXK5 485 aa21.47■■□□□ 1.03
CACNB3-203ENST00000540990 POGKQ9P215 609 aa21.47■■□□□ 1.03
CACNB3-203ENST00000540990 SPATA31D1Q6ZQQ2 1576 aa21.47■■□□□ 1.03
CACNB3-203ENST00000540990 EXOSC9Q06265 439 aaKnown RBP21.45■■□□□ 1.03
CACNB3-203ENST00000540990 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
CACNB3-203ENST00000540990 SEC24BO95487 1268 aa21.45■■□□□ 1.02
CACNB3-203ENST00000540990 HDAC1Q13547 482 aaPredicted RBP21.45■■□□□ 1.02
CACNB3-203ENST00000540990 CDK19Q9BWU1 502 aa21.45■■□□□ 1.02
CACNB3-203ENST00000540990 A2ML1A8K2U0 1454 aa21.44■■□□□ 1.02
CACNB3-203ENST00000540990 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
CACNB3-203ENST00000540990 PPIP5K1Q6PFW1 1433 aa21.44■■□□□ 1.02
CACNB3-203ENST00000540990 TSR2Q969E8 191 aaKnown RBP21.43■■□□□ 1.02
CACNB3-203ENST00000540990 FCHSD2O94868 740 aa21.43■■□□□ 1.02
CACNB3-203ENST00000540990 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
CACNB3-203ENST00000540990 FAM135BQ49AJ0 1406 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 TRIM27P14373 513 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 SSH1Q8WYL5 1049 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 SMC4Q9NTJ3 1288 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 DDX19BQ9UMR2 479 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
CACNB3-203ENST00000540990 BRPF1P55201 1214 aaPredicted RBP21.41■■□□□ 1.02
CACNB3-203ENST00000540990 ATF7IPQ6VMQ6 1270 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
CACNB3-203ENST00000540990 LRRC7Q96NW7 1537 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 GSE1Q14687 1217 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 ALDH1L2Q3SY69 923 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 TBC1D32Q96NH3 1257 aa21.41■■□□□ 1.02
CACNB3-203ENST00000540990 DIP2BQ9P265 1576 aa21.4■■□□□ 1.02
CACNB3-203ENST00000540990 BECN1Q14457 450 aa21.4■■□□□ 1.02
CACNB3-203ENST00000540990 RIPK4P57078 832 aa21.39■■□□□ 1.02
CACNB3-203ENST00000540990 CABP1Q9NZU7 370 aa21.39■■□□□ 1.02
CACNB3-203ENST00000540990 KIF16BQ96L93 1317 aa21.39■■□□□ 1.01
CACNB3-203ENST00000540990 CPSF1Q10570 1443 aaKnown RBP21.38■■□□□ 1.01
CACNB3-203ENST00000540990 SMC5Q8IY18 1101 aa21.38■■□□□ 1.01
CACNB3-203ENST00000540990 RSPH6AQ9H0K4 717 aa21.38■■□□□ 1.01
CACNB3-203ENST00000540990 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
CACNB3-203ENST00000540990 UPF2Q9HAU5 1272 aaKnown RBP21.36■■□□□ 1.01
CACNB3-203ENST00000540990 IPO8O15397 1037 aaKnown RBP21.36■■□□□ 1.01
CACNB3-203ENST00000540990 POLKQ9UBT6 870 aa21.36■■□□□ 1.01
CACNB3-203ENST00000540990 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
CACNB3-203ENST00000540990 ZBTB40Q9NUA8 1239 aa21.35■■□□□ 1.01
CACNB3-203ENST00000540990 AATKQ6ZMQ8 1374 aa21.35■■□□□ 1.01
CACNB3-203ENST00000540990 NRXN3Q9Y4C0 1643 aa21.35■■□□□ 1.01
CACNB3-203ENST00000540990 NOB1Q9ULX3 412 aaKnown RBP21.34■■□□□ 1.01
CACNB3-203ENST00000540990 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
CACNB3-203ENST00000540990 SIRT1Q96EB6 747 aa21.33■■□□□ 1.01
CACNB3-203ENST00000540990 KNDC1Q76NI1 1749 aa21.32■■□□□ 1
CACNB3-203ENST00000540990 PIK3R4Q99570 1358 aa21.32■■□□□ 1
CACNB3-203ENST00000540990 TECPR2O15040 1411 aa21.32■■□□□ 1
CACNB3-203ENST00000540990 FRAT2O75474 233 aaPredicted RBP21.32■■□□□ 1
CACNB3-203ENST00000540990 ANTXR1Q9H6X2 564 aa21.32■■□□□ 1
CACNB3-203ENST00000540990 STAG3Q9UJ98 1225 aa21.32■■□□□ 1
CACNB3-203ENST00000540990 TMEM57Q8N5G2 664 aa21.31■■□□□ 1
CACNB3-203ENST00000540990 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
CACNB3-203ENST00000540990 NFE2L2Q16236 605 aa21.3■■□□□ 1
CACNB3-203ENST00000540990 ITPRIPQ8IWB1 547 aa21.3■■□□□ 1
CACNB3-203ENST00000540990 PRKAR2BP31323 418 aa21.29■■□□□ 1
CACNB3-203ENST00000540990 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
CACNB3-203ENST00000540990 PTCH1Q13635 1447 aa21.28■■□□□ 1
CACNB3-203ENST00000540990 MON2Q7Z3U7 1717 aa21.28■■□□□ 1
CACNB3-203ENST00000540990 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
CACNB3-203ENST00000540990 IL13P35225 146 aa21.27■■□□□ 1
CACNB3-203ENST00000540990 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
CACNB3-203ENST00000540990 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.27■■□□□ 1
CACNB3-203ENST00000540990 MAP2P11137 1827 aaKnown RBP21.27■■□□□ 1
CACNB3-203ENST00000540990 ZNF853P0CG23 659 aa21.27■□□□□ 0.99
CACNB3-203ENST00000540990 FAM69CQ0P6D2 419 aa21.27■□□□□ 0.99
CACNB3-203ENST00000540990 CPS1P31327 1500 aa21.26■□□□□ 0.99
CACNB3-203ENST00000540990 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
CACNB3-203ENST00000540990 CHMP4BQ9H444 224 aaKnown RBP21.25■□□□□ 0.99
CACNB3-203ENST00000540990 IFT57Q9NWB7 429 aa21.25■□□□□ 0.99
CACNB3-203ENST00000540990 NUCB1Q02818 461 aa21.25■□□□□ 0.99
CACNB3-203ENST00000540990 VAMP4O75379 141 aa21.24■□□□□ 0.99
CACNB3-203ENST00000540990 GNAI1P63096 354 aa21.23■□□□□ 0.99
CACNB3-203ENST00000540990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.23■□□□□ 0.99
CACNB3-203ENST00000540990 MRPL50Q8N5N7 158 aaKnown RBP21.23■□□□□ 0.99
CACNB3-203ENST00000540990 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
CACNB3-203ENST00000540990 AKAP12Q02952 1782 aa21.23■□□□□ 0.99
CACNB3-203ENST00000540990 PHACTR3Q96KR7 559 aa21.22■□□□□ 0.99
CACNB3-203ENST00000540990 C3P01024 1663 aa21.22■□□□□ 0.99
CACNB3-203ENST00000540990 METP08581 1390 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms