RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
TRIM65-203ENST00000540812 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
TRIM65-203ENST00000540812 KRT27Q7Z3Y8 459 aa23.66■■□□□ 1.38
TRIM65-203ENST00000540812 DEFB132Q7Z7B7 95 aa23.66■■□□□ 1.38
TRIM65-203ENST00000540812 CDK19Q9BWU1 502 aa23.65■■□□□ 1.38
TRIM65-203ENST00000540812 COL14A1Q05707 1796 aaKnown RBP23.65■■□□□ 1.38
TRIM65-203ENST00000540812 CRYBG1Q9Y4K1 1723 aa23.64■■□□□ 1.38
TRIM65-203ENST00000540812 FAM98CQ17RN3 349 aaKnown RBP23.64■■□□□ 1.37
TRIM65-203ENST00000540812 A0A0G2JS52 829 aa23.63■■□□□ 1.37
TRIM65-203ENST00000540812 MYT1Q01538 1121 aa23.63■■□□□ 1.37
TRIM65-203ENST00000540812 NBPF1Q3BBV0 1214 aa23.63■■□□□ 1.37
TRIM65-203ENST00000540812 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
TRIM65-203ENST00000540812 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
TRIM65-203ENST00000540812 SF3B2Q13435 895 aaKnown RBP23.6■■□□□ 1.37
TRIM65-203ENST00000540812 PRDM11Q9NQV5 511 aa23.6■■□□□ 1.37
TRIM65-203ENST00000540812 SPATA31A5Q5VU36 1347 aa23.59■■□□□ 1.37
TRIM65-203ENST00000540812 SPATA31A7Q8IWB4 1347 aa23.59■■□□□ 1.37
TRIM65-203ENST00000540812 NUTM2GQ5VZR2 741 aa23.59■■□□□ 1.37
TRIM65-203ENST00000540812 ACEP12821 1306 aa23.59■■□□□ 1.37
TRIM65-203ENST00000540812 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
TRIM65-203ENST00000540812 KIAA0232Q92628 1395 aa23.58■■□□□ 1.37
TRIM65-203ENST00000540812 TOPAZ1Q8N9V7 1692 aa23.57■■□□□ 1.36
TRIM65-203ENST00000540812 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
TRIM65-203ENST00000540812 NBPF8Q3BBV2 869 aa23.57■■□□□ 1.36
TRIM65-203ENST00000540812 CCDC61Q9Y6R9 512 aa23.57■■□□□ 1.36
TRIM65-203ENST00000540812 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
TRIM65-203ENST00000540812 PHRF1Q9P1Y6 1649 aaKnown RBP23.55■■□□□ 1.36
TRIM65-203ENST00000540812 ZC3H6P61129 1189 aaKnown RBP23.54■■□□□ 1.36
TRIM65-203ENST00000540812 FAM182BQ5T319 152 aa23.54■■□□□ 1.36
TRIM65-203ENST00000540812 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.36
TRIM65-203ENST00000540812 SPATA31A1Q5TZJ5 1347 aa23.51■■□□□ 1.35
TRIM65-203ENST00000540812 CENPJQ9HC77 1338 aaPredicted RBP23.51■■□□□ 1.35
TRIM65-203ENST00000540812 STRN4Q9NRL3 753 aa23.5■■□□□ 1.35
TRIM65-203ENST00000540812 BAG6P46379 1132 aa23.49■■□□□ 1.35
TRIM65-203ENST00000540812 SRPK2P78362 688 aaKnown RBP23.49■■□□□ 1.35
TRIM65-203ENST00000540812 ABTB2Q8N961 1025 aa23.49■■□□□ 1.35
TRIM65-203ENST00000540812 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
TRIM65-203ENST00000540812 PPIP5K1Q6PFW1 1433 aa23.48■■□□□ 1.35
TRIM65-203ENST00000540812 L3MBTL2Q969R5 705 aa23.47■■□□□ 1.35
TRIM65-203ENST00000540812 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
TRIM65-203ENST00000540812 USP19O94966 1318 aa23.46■■□□□ 1.35
TRIM65-203ENST00000540812 EN1Q05925 392 aaPredicted RBP23.45■■□□□ 1.34
TRIM65-203ENST00000540812 SSH2Q76I76 1423 aa23.44■■□□□ 1.34
TRIM65-203ENST00000540812 USP35Q9P2H5 1018 aa23.44■■□□□ 1.34
TRIM65-203ENST00000540812 PSDA5PKW4 1024 aaPredicted RBP23.43■■□□□ 1.34
TRIM65-203ENST00000540812 EVA1CP58658 441 aa23.43■■□□□ 1.34
TRIM65-203ENST00000540812 LARP1Q6PKG0 1096 aaKnown RBP23.43■■□□□ 1.34
TRIM65-203ENST00000540812 SIN3AQ96ST3 1273 aa23.43■■□□□ 1.34
TRIM65-203ENST00000540812 QRICH2Q9H0J4 1663 aa23.43■■□□□ 1.34
TRIM65-203ENST00000540812 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
TRIM65-203ENST00000540812 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
TRIM65-203ENST00000540812 CPDO75976 1380 aa23.42■■□□□ 1.34
TRIM65-203ENST00000540812 CABP1Q9NZU7 370 aa23.41■■□□□ 1.34
TRIM65-203ENST00000540812 GCP02774 474 aa23.4■■□□□ 1.34
TRIM65-203ENST00000540812 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
TRIM65-203ENST00000540812 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
TRIM65-203ENST00000540812 DISP2A7MBM2 1401 aa23.39■■□□□ 1.33
TRIM65-203ENST00000540812 TNS1Q9HBL0 1735 aaKnown RBP23.39■■□□□ 1.33
TRIM65-203ENST00000540812 BARGINQ6ZT62 677 aa23.38■■□□□ 1.33
TRIM65-203ENST00000540812 USP6P35125 1406 aa23.37■■□□□ 1.33
TRIM65-203ENST00000540812 TRIM37O94972 964 aa23.37■■□□□ 1.33
TRIM65-203ENST00000540812 FAM196AQ6ZSG2 479 aa23.37■■□□□ 1.33
TRIM65-203ENST00000540812 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
TRIM65-203ENST00000540812 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
TRIM65-203ENST00000540812 TCP11L2Q8N4U5 519 aa23.36■■□□□ 1.33
TRIM65-203ENST00000540812 BRD4O60885 1362 aaPredicted RBP23.36■■□□□ 1.33
TRIM65-203ENST00000540812 TRPM1Q7Z4N2 1603 aa23.36■■□□□ 1.33
TRIM65-203ENST00000540812 LRP5O75197 1615 aa23.34■■□□□ 1.33
TRIM65-203ENST00000540812 ZBTB7CA1YPR0 619 aa23.34■■□□□ 1.33
TRIM65-203ENST00000540812 NLRP6P59044 892 aa23.34■■□□□ 1.33
TRIM65-203ENST00000540812 COL5A2P05997 1499 aaPredicted RBP23.34■■□□□ 1.33
TRIM65-203ENST00000540812 EVC2Q86UK5 1308 aa23.33■■□□□ 1.33
TRIM65-203ENST00000540812 PDE3BQ13370 1112 aa23.33■■□□□ 1.33
TRIM65-203ENST00000540812 CAMKK2Q96RR4 588 aa23.33■■□□□ 1.33
TRIM65-203ENST00000540812 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
TRIM65-203ENST00000540812 R3HDM1Q15032 1099 aaKnown RBP23.32■■□□□ 1.32
TRIM65-203ENST00000540812 SLIT3O75094 1523 aa23.32■■□□□ 1.32
TRIM65-203ENST00000540812 APBA3O96018 575 aa23.3■■□□□ 1.32
TRIM65-203ENST00000540812 THRAP3Q9Y2W1 955 aaKnown RBP23.3■■□□□ 1.32
TRIM65-203ENST00000540812 PIK3C2AO00443 1686 aa23.29■■□□□ 1.32
TRIM65-203ENST00000540812 AATKQ6ZMQ8 1374 aa23.28■■□□□ 1.32
TRIM65-203ENST00000540812 CRB1P82279 1406 aa23.27■■□□□ 1.32
TRIM65-203ENST00000540812 TTC21BQ7Z4L5 1316 aa23.27■■□□□ 1.32
TRIM65-203ENST00000540812 AXIN2Q9Y2T1 843 aa23.24■■□□□ 1.31
TRIM65-203ENST00000540812 PARP4Q9UKK3 1724 aaKnown RBP23.24■■□□□ 1.31
TRIM65-203ENST00000540812 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
TRIM65-203ENST00000540812 COL18A1P39060 1754 aa23.24■■□□□ 1.31
TRIM65-203ENST00000540812 ZNF692Q9BU19 519 aaPredicted RBP23.23■■□□□ 1.31
TRIM65-203ENST00000540812 SOX12O15370 315 aa23.22■■□□□ 1.31
TRIM65-203ENST00000540812 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
TRIM65-203ENST00000540812 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
TRIM65-203ENST00000540812 ARHGEF25Q86VW2 580 aa23.21■■□□□ 1.31
TRIM65-203ENST00000540812 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
TRIM65-203ENST00000540812 RREB1Q92766 1687 aa23.2■■□□□ 1.3
TRIM65-203ENST00000540812 WDR17Q8IZU2 1322 aa23.19■■□□□ 1.3
TRIM65-203ENST00000540812 TTC21AQ8NDW8 1320 aa23.19■■□□□ 1.3
TRIM65-203ENST00000540812 NUP188Q5SRE5 1749 aa23.18■■□□□ 1.3
TRIM65-203ENST00000540812 LRRC37A3O60309 1634 aa23.18■■□□□ 1.3
TRIM65-203ENST00000540812 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
TRIM65-203ENST00000540812 OVOS2A0A0J9YW53 1432 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms