RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 ATAD2Q6PL18 1390 aa24.48■■□□□ 1.51
CACNA2D4-211ENST00000540728 UNC5CLQ8IV45 518 aa24.48■■□□□ 1.51
CACNA2D4-211ENST00000540728 GLI3P10071 1580 aa24.46■■□□□ 1.51
CACNA2D4-211ENST00000540728 RALGAPBQ86X10 1494 aa24.46■■□□□ 1.51
CACNA2D4-211ENST00000540728 CRYBG1Q9Y4K1 1723 aa24.45■■□□□ 1.5
CACNA2D4-211ENST00000540728 NBPF8Q3BBV2 869 aa24.45■■□□□ 1.5
CACNA2D4-211ENST00000540728 GJD4Q96KN9 370 aaPredicted RBP24.45■■□□□ 1.5
CACNA2D4-211ENST00000540728 PLEKHG3A1L390 1219 aa24.43■■□□□ 1.5
CACNA2D4-211ENST00000540728 CABP2Q9NPB3 220 aa24.43■■□□□ 1.5
CACNA2D4-211ENST00000540728 ACEP12821 1306 aa24.42■■□□□ 1.5
CACNA2D4-211ENST00000540728 EVC2Q86UK5 1308 aa24.42■■□□□ 1.5
CACNA2D4-211ENST00000540728 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
CACNA2D4-211ENST00000540728 COL14A1Q05707 1796 aaKnown RBP24.42■■□□□ 1.5
CACNA2D4-211ENST00000540728 NRAPQ86VF7 1730 aa24.41■■□□□ 1.5
CACNA2D4-211ENST00000540728 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
CACNA2D4-211ENST00000540728 PHRF1Q9P1Y6 1649 aaKnown RBP24.4■■□□□ 1.5
CACNA2D4-211ENST00000540728 CARD11Q9BXL7 1154 aa24.4■■□□□ 1.5
CACNA2D4-211ENST00000540728 PPIP5K1Q6PFW1 1433 aa24.39■■□□□ 1.5
CACNA2D4-211ENST00000540728 FAM83GA6ND36 823 aa24.36■■□□□ 1.49
CACNA2D4-211ENST00000540728 VPS72Q15906 364 aa24.36■■□□□ 1.49
CACNA2D4-211ENST00000540728 NUTM2GQ5VZR2 741 aa24.35■■□□□ 1.49
CACNA2D4-211ENST00000540728 PRDM11Q9NQV5 511 aa24.34■■□□□ 1.49
CACNA2D4-211ENST00000540728 BTG4Q9NY30 223 aa24.34■■□□□ 1.49
CACNA2D4-211ENST00000540728 CABP1Q9NZU7 370 aa24.34■■□□□ 1.49
CACNA2D4-211ENST00000540728 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.49
CACNA2D4-211ENST00000540728 EP400Q96L91 3159 aa24.33■■□□□ 1.49
CACNA2D4-211ENST00000540728 A0A0G2JS52 829 aa24.33■■□□□ 1.49
CACNA2D4-211ENST00000540728 MYT1Q01538 1121 aa24.33■■□□□ 1.49
CACNA2D4-211ENST00000540728 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
CACNA2D4-211ENST00000540728 NRKQ7Z2Y5 1582 aa24.32■■□□□ 1.48
CACNA2D4-211ENST00000540728 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
CACNA2D4-211ENST00000540728 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
CACNA2D4-211ENST00000540728 KIAA0232Q92628 1395 aa24.3■■□□□ 1.48
CACNA2D4-211ENST00000540728 SEPT12Q8IYM1 358 aa24.29■■□□□ 1.48
CACNA2D4-211ENST00000540728 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
CACNA2D4-211ENST00000540728 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
CACNA2D4-211ENST00000540728 CHRNA2Q15822 529 aa24.26■■□□□ 1.47
CACNA2D4-211ENST00000540728 ZC3H6P61129 1189 aaKnown RBP24.25■■□□□ 1.47
CACNA2D4-211ENST00000540728 ZNF692Q9BU19 519 aaPredicted RBP24.25■■□□□ 1.47
CACNA2D4-211ENST00000540728 CLSPNQ9HAW4 1339 aa24.25■■□□□ 1.47
CACNA2D4-211ENST00000540728 USP6P35125 1406 aa24.25■■□□□ 1.47
CACNA2D4-211ENST00000540728 FAM98CQ17RN3 349 aaKnown RBP24.24■■□□□ 1.47
CACNA2D4-211ENST00000540728 STRN4Q9NRL3 753 aa24.22■■□□□ 1.47
CACNA2D4-211ENST00000540728 USP19O94966 1318 aa24.21■■□□□ 1.47
CACNA2D4-211ENST00000540728 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
CACNA2D4-211ENST00000540728 BLMP54132 1417 aaPredicted RBP24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 SPATA31A5Q5VU36 1347 aa24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 SPATA31A7Q8IWB4 1347 aa24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 NLRP6P59044 892 aa24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 KRT27Q7Z3Y8 459 aa24.2■■□□□ 1.46
CACNA2D4-211ENST00000540728 PIK3C2AO00443 1686 aa24.19■■□□□ 1.46
CACNA2D4-211ENST00000540728 THSD7AQ9UPZ6 1657 aa24.19■■□□□ 1.46
CACNA2D4-211ENST00000540728 CCDC125Q86Z20 511 aa24.19■■□□□ 1.46
CACNA2D4-211ENST00000540728 AKAP12Q02952 1782 aa24.19■■□□□ 1.46
CACNA2D4-211ENST00000540728 ONECUT3O60422 494 aaPredicted RBP24.18■■□□□ 1.46
CACNA2D4-211ENST00000540728 GCP02774 474 aa24.17■■□□□ 1.46
CACNA2D4-211ENST00000540728 LMO7Q8WWI1 1683 aa24.17■■□□□ 1.46
CACNA2D4-211ENST00000540728 CPDO75976 1380 aa24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 ZBTB7CA1YPR0 619 aa24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 SF3B2Q13435 895 aaKnown RBP24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
CACNA2D4-211ENST00000540728 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
CACNA2D4-211ENST00000540728 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
CACNA2D4-211ENST00000540728 SLIT3O75094 1523 aa24.15■■□□□ 1.46
CACNA2D4-211ENST00000540728 TTC21AQ8NDW8 1320 aa24.14■■□□□ 1.46
CACNA2D4-211ENST00000540728 EVA1CP58658 441 aa24.14■■□□□ 1.45
CACNA2D4-211ENST00000540728 CPSF1Q10570 1443 aaKnown RBP24.14■■□□□ 1.45
CACNA2D4-211ENST00000540728 CAMTA1Q9Y6Y1 1673 aa24.14■■□□□ 1.45
CACNA2D4-211ENST00000540728 SPATA31A1Q5TZJ5 1347 aa24.13■■□□□ 1.45
CACNA2D4-211ENST00000540728 HDGFL2Q7Z4V5 671 aaPredicted RBP24.13■■□□□ 1.45
CACNA2D4-211ENST00000540728 USP35Q9P2H5 1018 aa24.13■■□□□ 1.45
CACNA2D4-211ENST00000540728 MON2Q7Z3U7 1717 aa24.11■■□□□ 1.45
CACNA2D4-211ENST00000540728 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
CACNA2D4-211ENST00000540728 TESK2Q96S53 571 aa24.1■■□□□ 1.45
CACNA2D4-211ENST00000540728 TERF2IPQ9NYB0 399 aa24.1■■□□□ 1.45
CACNA2D4-211ENST00000540728 COL5A2P05997 1499 aaPredicted RBP24.09■■□□□ 1.45
CACNA2D4-211ENST00000540728 USP47Q96K76 1375 aa24.09■■□□□ 1.45
CACNA2D4-211ENST00000540728 SLC12A5Q9H2X9 1139 aa24.09■■□□□ 1.45
CACNA2D4-211ENST00000540728 RGPD1P0DJD0 1748 aa24.08■■□□□ 1.45
CACNA2D4-211ENST00000540728 LARP1Q6PKG0 1096 aaKnown RBP24.08■■□□□ 1.45
CACNA2D4-211ENST00000540728 DEFB132Q7Z7B7 95 aa24.08■■□□□ 1.45
CACNA2D4-211ENST00000540728 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.45
CACNA2D4-211ENST00000540728 ZRANB1Q9UGI0 708 aa24.08■■□□□ 1.45
CACNA2D4-211ENST00000540728 FAM182BQ5T319 152 aa24.07■■□□□ 1.44
CACNA2D4-211ENST00000540728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
CACNA2D4-211ENST00000540728 SOX12O15370 315 aa24.06■■□□□ 1.44
CACNA2D4-211ENST00000540728 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
CACNA2D4-211ENST00000540728 TMF1P82094 1093 aa24.05■■□□□ 1.44
CACNA2D4-211ENST00000540728 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
CACNA2D4-211ENST00000540728 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
CACNA2D4-211ENST00000540728 TCP11L2Q8N4U5 519 aa24.03■■□□□ 1.44
CACNA2D4-211ENST00000540728 TNS1Q9HBL0 1735 aaKnown RBP24.02■■□□□ 1.44
CACNA2D4-211ENST00000540728 BAG6P46379 1132 aa24.02■■□□□ 1.44
CACNA2D4-211ENST00000540728 CRB1P82279 1406 aa24.01■■□□□ 1.43
CACNA2D4-211ENST00000540728 EDC4Q6P2E9 1401 aaKnown RBP24.01■■□□□ 1.43
CACNA2D4-211ENST00000540728 CDCA8Q53HL2 280 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms