RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 QTRT2Q9H974 415 aaKnown RBP14.76□□□□□ -0.05
ATL3-204ENST00000540699 MYOM1P52179 1685 aa14.76□□□□□ -0.05
ATL3-204ENST00000540699 EP400Q96L91 3159 aa14.76□□□□□ -0.05
ATL3-204ENST00000540699 SBNO1A3KN83 1393 aa14.75□□□□□ -0.05
ATL3-204ENST00000540699 ADAMTS2O95450 1211 aa14.75□□□□□ -0.05
ATL3-204ENST00000540699 NINLQ9Y2I6 1382 aa14.74□□□□□ -0.05
ATL3-204ENST00000540699 ACEP12821 1306 aa14.74□□□□□ -0.05
ATL3-204ENST00000540699 NRKQ7Z2Y5 1582 aa14.74□□□□□ -0.05
ATL3-204ENST00000540699 RBM6P78332 1123 aaKnown RBP14.74□□□□□ -0.05
ATL3-204ENST00000540699 KRT28Q7Z3Y7 464 aa14.74□□□□□ -0.05
ATL3-204ENST00000540699 CD163L1Q9NR16 1453 aa14.74□□□□□ -0.05
ATL3-204ENST00000540699 CPSF1Q10570 1443 aaKnown RBP14.74□□□□□ -0.05
ATL3-204ENST00000540699 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
ATL3-204ENST00000540699 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
ATL3-204ENST00000540699 NGDNQ8NEJ9 315 aaKnown RBP14.73□□□□□ -0.05
ATL3-204ENST00000540699 NGLY1Q96IV0 654 aa14.73□□□□□ -0.05
ATL3-204ENST00000540699 CABP1Q9NZU7 370 aa14.73□□□□□ -0.05
ATL3-204ENST00000540699 TNS3Q68CZ2 1445 aa14.73□□□□□ -0.05
ATL3-204ENST00000540699 CRYBG1Q9Y4K1 1723 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 SPATA31A3Q5VYP0 1347 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 C11orf95C9JLR9 678 aaPredicted RBP14.72□□□□□ -0.05
ATL3-204ENST00000540699 PSME1Q06323 249 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 CDCA8Q53HL2 280 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 SSH2Q76I76 1423 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 ABCA3Q99758 1704 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 CCDC7Q96M83 1385 aa14.72□□□□□ -0.05
ATL3-204ENST00000540699 XPCQ01831 940 aaPredicted RBP14.71□□□□□ -0.05
ATL3-204ENST00000540699 USP6P35125 1406 aa14.71□□□□□ -0.05
ATL3-204ENST00000540699 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.7□□□□□ -0.06
ATL3-204ENST00000540699 ATRNO75882 1429 aa14.7□□□□□ -0.06
ATL3-204ENST00000540699 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
ATL3-204ENST00000540699 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
ATL3-204ENST00000540699 USP21Q9UK80 565 aa14.69□□□□□ -0.06
ATL3-204ENST00000540699 ARHGEF10O15013 1369 aa14.69□□□□□ -0.06
ATL3-204ENST00000540699 KIF7Q2M1P5 1343 aa14.68□□□□□ -0.06
ATL3-204ENST00000540699 PIK3C2AO00443 1686 aa14.68□□□□□ -0.06
ATL3-204ENST00000540699 USP54Q70EL1 1684 aa14.68□□□□□ -0.06
ATL3-204ENST00000540699 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
ATL3-204ENST00000540699 SRCAPQ6ZRS2 3230 aa14.68□□□□□ -0.06
ATL3-204ENST00000540699 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
ATL3-204ENST00000540699 BCL9LQ86UU0 1499 aa14.66□□□□□ -0.06
ATL3-204ENST00000540699 A0A1W2PP64 1363 aa14.66□□□□□ -0.06
ATL3-204ENST00000540699 KTN1Q86UP2 1357 aaKnown RBP14.66□□□□□ -0.06
ATL3-204ENST00000540699 ANKRD36BQ8N2N9 1353 aa14.66□□□□□ -0.06
ATL3-204ENST00000540699 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
ATL3-204ENST00000540699 PHRF1Q9P1Y6 1649 aaKnown RBP14.66□□□□□ -0.06
ATL3-204ENST00000540699 TMC1Q8TDI8 760 aa14.65□□□□□ -0.06
ATL3-204ENST00000540699 TERF2IPQ9NYB0 399 aa14.65□□□□□ -0.06
ATL3-204ENST00000540699 EDC4Q6P2E9 1401 aaKnown RBP14.65□□□□□ -0.06
ATL3-204ENST00000540699 TTC21AQ8NDW8 1320 aa14.64□□□□□ -0.07
ATL3-204ENST00000540699 PLCH1Q4KWH8 1693 aa14.63□□□□□ -0.07
ATL3-204ENST00000540699 HDGFL2Q7Z4V5 671 aaPredicted RBP14.63□□□□□ -0.07
ATL3-204ENST00000540699 TTC21BQ7Z4L5 1316 aa14.63□□□□□ -0.07
ATL3-204ENST00000540699 GLI3P10071 1580 aa14.62□□□□□ -0.07
ATL3-204ENST00000540699 ZRANB1Q9UGI0 708 aa14.62□□□□□ -0.07
ATL3-204ENST00000540699 KIF20BQ96Q89 1820 aa14.62□□□□□ -0.07
ATL3-204ENST00000540699 SLIT3O75094 1523 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 SLIT2O94813 1529 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
ATL3-204ENST00000540699 CCDC125Q86Z20 511 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 BRWD3Q6RI45 1802 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 USP19O94966 1318 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 NWD2Q9ULI1 1742 aa14.61□□□□□ -0.07
ATL3-204ENST00000540699 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
ATL3-204ENST00000540699 MIER1Q8N108 512 aa14.6□□□□□ -0.07
ATL3-204ENST00000540699 ABTB2Q8N961 1025 aa14.59□□□□□ -0.07
ATL3-204ENST00000540699 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
ATL3-204ENST00000540699 GJD4Q96KN9 370 aaPredicted RBP14.58□□□□□ -0.08
ATL3-204ENST00000540699 CARD14Q9BXL6 1004 aa14.58□□□□□ -0.08
ATL3-204ENST00000540699 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.08
ATL3-204ENST00000540699 NLRP13Q86W25 1043 aa14.57□□□□□ -0.08
ATL3-204ENST00000540699 UNC5CLQ8IV45 518 aa14.57□□□□□ -0.08
ATL3-204ENST00000540699 CABLES1Q8TDN4 633 aa14.57□□□□□ -0.08
ATL3-204ENST00000540699 OVOS2A0A0J9YW53 1432 aa14.57□□□□□ -0.08
ATL3-204ENST00000540699 OVOS2Q6IE36 1432 aa14.57□□□□□ -0.08
ATL3-204ENST00000540699 COL14A1Q05707 1796 aaKnown RBP14.56□□□□□ -0.08
ATL3-204ENST00000540699 NSD3Q9BZ95 1437 aa14.56□□□□□ -0.08
ATL3-204ENST00000540699 NFAT5O94916 1531 aa14.56□□□□□ -0.08
ATL3-204ENST00000540699 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
ATL3-204ENST00000540699 NLRP6P59044 892 aa14.55□□□□□ -0.08
ATL3-204ENST00000540699 NME9Q86XW9 330 aa14.55□□□□□ -0.08
ATL3-204ENST00000540699 NUTM2GQ5VZR2 741 aa14.54□□□□□ -0.08
ATL3-204ENST00000540699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.54□□□□□ -0.08
ATL3-204ENST00000540699 POLR3GLQ9BT43 218 aa14.54□□□□□ -0.08
ATL3-204ENST00000540699 CPDO75976 1380 aa14.54□□□□□ -0.08
ATL3-204ENST00000540699 LMO7Q8WWI1 1683 aa14.54□□□□□ -0.08
ATL3-204ENST00000540699 COL18A1P39060 1754 aa14.54□□□□□ -0.08
ATL3-204ENST00000540699 PANK3Q9H999 370 aa14.53□□□□□ -0.08
ATL3-204ENST00000540699 LTN1O94822 1766 aa14.52□□□□□ -0.08
ATL3-204ENST00000540699 FYB1O15117 783 aa14.52□□□□□ -0.09
ATL3-204ENST00000540699 GCP02774 474 aa14.52□□□□□ -0.09
ATL3-204ENST00000540699 HAP1P54257 671 aaPredicted RBP14.52□□□□□ -0.09
ATL3-204ENST00000540699 ABCC6O95255 1503 aa14.51□□□□□ -0.09
ATL3-204ENST00000540699 KIAA0232Q92628 1395 aa14.5□□□□□ -0.09
ATL3-204ENST00000540699 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
ATL3-204ENST00000540699 VPS72Q15906 364 aa14.5□□□□□ -0.09
ATL3-204ENST00000540699 KCNH5Q8NCM2 988 aa14.5□□□□□ -0.09
ATL3-204ENST00000540699 NSD2O96028 1365 aa14.49□□□□□ -0.09
ATL3-204ENST00000540699 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
ATL3-204ENST00000540699 FAM83GA6ND36 823 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms