RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 DNAJC5Q9H3Z4 198 aa12.48□□□□□ -0.41
LCOR-209ENST00000540664 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
LCOR-209ENST00000540664 U2AF1L5P0DN76 240 aaPredicted RBP12.47□□□□□ -0.41
LCOR-209ENST00000540664 U2AF1Q01081 240 aaKnown RBP eCLIP12.47□□□□□ -0.41
LCOR-209ENST00000540664 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
LCOR-209ENST00000540664 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.47□□□□□ -0.41
LCOR-209ENST00000540664 LTKP29376 864 aa12.46□□□□□ -0.41
LCOR-209ENST00000540664 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
LCOR-209ENST00000540664 RIMS1Q86UR5 1692 aaKnown RBP12.46□□□□□ -0.41
LCOR-209ENST00000540664 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
LCOR-209ENST00000540664 RRP7AQ9Y3A4 280 aaKnown RBP12.46□□□□□ -0.42
LCOR-209ENST00000540664 ITSN1Q15811 1721 aa12.46□□□□□ -0.42
LCOR-209ENST00000540664 KDM2BQ8NHM5 1336 aa12.46□□□□□ -0.42
LCOR-209ENST00000540664 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
LCOR-209ENST00000540664 BCAR3O75815 825 aa12.45□□□□□ -0.42
LCOR-209ENST00000540664 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
LCOR-209ENST00000540664 CCDC61Q9Y6R9 512 aa12.44□□□□□ -0.42
LCOR-209ENST00000540664 AATKQ6ZMQ8 1374 aa12.44□□□□□ -0.42
LCOR-209ENST00000540664 MAP2P11137 1827 aaKnown RBP12.44□□□□□ -0.42
LCOR-209ENST00000540664 NRKQ7Z2Y5 1582 aa12.44□□□□□ -0.42
LCOR-209ENST00000540664 DIAPH1O60610 1272 aaKnown RBP12.43□□□□□ -0.42
LCOR-209ENST00000540664 NEUROD2Q15784 382 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 PTPRUQ92729 1446 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 PRR36Q9H6K5 1346 aa12.43□□□□□ -0.42
LCOR-209ENST00000540664 MS4A1P11836 297 aa12.42□□□□□ -0.42
LCOR-209ENST00000540664 EID1Q9Y6B2 187 aa12.42□□□□□ -0.42
LCOR-209ENST00000540664 CDK12Q9NYV4 1490 aaPredicted RBP12.42□□□□□ -0.42
LCOR-209ENST00000540664 ADAMTSL3P82987 1691 aa12.42□□□□□ -0.42
LCOR-209ENST00000540664 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
LCOR-209ENST00000540664 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
LCOR-209ENST00000540664 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.42□□□□□ -0.428e-7■■■□□ 17.7
LCOR-209ENST00000540664 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
LCOR-209ENST00000540664 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
LCOR-209ENST00000540664 RARSP54136 660 aaKnown RBP12.41□□□□□ -0.42
LCOR-209ENST00000540664 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
LCOR-209ENST00000540664 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
LCOR-209ENST00000540664 IL16Q14005 1332 aa12.41□□□□□ -0.42
LCOR-209ENST00000540664 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
LCOR-209ENST00000540664 PNNQ9H307 717 aaKnown RBP12.41□□□□□ -0.42
LCOR-209ENST00000540664 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
LCOR-209ENST00000540664 FCHSD2O94868 740 aa12.4□□□□□ -0.42
LCOR-209ENST00000540664 CENPQQ7L2Z9 268 aaPredicted RBP12.4□□□□□ -0.42
LCOR-209ENST00000540664 THEMISQ8N1K5 641 aaPredicted RBP12.4□□□□□ -0.42
LCOR-209ENST00000540664 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
LCOR-209ENST00000540664 NCKAP5LQ9HCH0 1330 aa12.4□□□□□ -0.43
LCOR-209ENST00000540664 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
LCOR-209ENST00000540664 NME9Q86XW9 330 aa12.39□□□□□ -0.43
LCOR-209ENST00000540664 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
LCOR-209ENST00000540664 XRN1Q8IZH2 1706 aaKnown RBP12.39□□□□□ -0.43
LCOR-209ENST00000540664 MAPK8IP3Q9UPT6 1336 aa12.38□□□□□ -0.43
LCOR-209ENST00000540664 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
LCOR-209ENST00000540664 RSPH6AQ9H0K4 717 aa12.38□□□□□ -0.43
LCOR-209ENST00000540664 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
LCOR-209ENST00000540664 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
LCOR-209ENST00000540664 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
LCOR-209ENST00000540664 FBLN1P23142 703 aa12.37□□□□□ -0.43
LCOR-209ENST00000540664 IL13P35225 146 aa12.37□□□□□ -0.43
LCOR-209ENST00000540664 ANP32EQ9BTT0 268 aa12.37□□□□□ -0.43
LCOR-209ENST00000540664 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
LCOR-209ENST00000540664 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
LCOR-209ENST00000540664 COG3Q96JB2 828 aa12.36□□□□□ -0.43
LCOR-209ENST00000540664 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
LCOR-209ENST00000540664 EMILIN1Q9Y6C2 1016 aa12.36□□□□□ -0.43
LCOR-209ENST00000540664 AAMPQ13685 434 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 USP6P35125 1406 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 PDE4AP27815 886 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 RIPK4P57078 832 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 AMOTL2Q9Y2J4 779 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 TTC21BQ7Z4L5 1316 aa12.35□□□□□ -0.43
LCOR-209ENST00000540664 ACEP12821 1306 aa12.34□□□□□ -0.43
LCOR-209ENST00000540664 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
LCOR-209ENST00000540664 PANK1Q8TE04 598 aa12.34□□□□□ -0.43
LCOR-209ENST00000540664 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
LCOR-209ENST00000540664 PRKAR2BP31323 418 aa12.33□□□□□ -0.44
LCOR-209ENST00000540664 CLUAP1Q96AJ1 413 aa12.33□□□□□ -0.44
LCOR-209ENST00000540664 TSR2Q969E8 191 aaKnown RBP12.33□□□□□ -0.44
LCOR-209ENST00000540664 PPM1GO15355 546 aaPredicted RBP12.32□□□□□ -0.44
LCOR-209ENST00000540664 CANXP27824 592 aaKnown RBP12.32□□□□□ -0.44
LCOR-209ENST00000540664 EXOSC9Q06265 439 aaKnown RBP12.32□□□□□ -0.44
LCOR-209ENST00000540664 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
LCOR-209ENST00000540664 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
LCOR-209ENST00000540664 RLBP1P12271 317 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 NFE2L2Q16236 605 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 FRAT1Q92837 279 aaPredicted RBP12.31□□□□□ -0.44
LCOR-209ENST00000540664 PHACTR3Q96KR7 559 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 PEAK1Q9H792 1746 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 ANKARQ7Z5J8 1434 aa12.31□□□□□ -0.44
LCOR-209ENST00000540664 MYT1Q01538 1121 aa12.3□□□□□ -0.44
LCOR-209ENST00000540664 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
LCOR-209ENST00000540664 RGPD8O14715 1765 aaPredicted RBP12.3□□□□□ -0.44
LCOR-209ENST00000540664 IGHDP01880 384 aa12.3□□□□□ -0.44
LCOR-209ENST00000540664 TNNQ9UQP3 1299 aa12.3□□□□□ -0.44
LCOR-209ENST00000540664 DLG5Q8TDM6 1919 aa12.3□□□□□ -0.44
LCOR-209ENST00000540664 TTC21AQ8NDW8 1320 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms