RNA–Protein interactions for RNA: ENST00000540490.5

LINC02411-201, Transcript of long intergenic non-protein coding RNA 2411, humanhuman

TSL 3

Gene LINC02411, Length 848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02411-201ENST00000540490 PIP4K2BP78356 416 aa13.14□□□□□ -0.31
LINC02411-201ENST00000540490 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
LINC02411-201ENST00000540490 ABCA3Q99758 1704 aa13.13□□□□□ -0.31
LINC02411-201ENST00000540490 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
LINC02411-201ENST00000540490 NGDNQ8NEJ9 315 aaKnown RBP13.13□□□□□ -0.31
LINC02411-201ENST00000540490 MED1Q15648 1581 aaPredicted RBP13.12□□□□□ -0.31
LINC02411-201ENST00000540490 NME9Q86XW9 330 aa13.12□□□□□ -0.31
LINC02411-201ENST00000540490 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
LINC02411-201ENST00000540490 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
LINC02411-201ENST00000540490 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
LINC02411-201ENST00000540490 PHRF1Q9P1Y6 1649 aaKnown RBP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 CNGB1Q14028 1251 aaPredicted RBP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 HDGFL2Q7Z4V5 671 aaPredicted RBP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 TNS3Q68CZ2 1445 aa13.11□□□□□ -0.31
LINC02411-201ENST00000540490 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
LINC02411-201ENST00000540490 TERF2IPQ9NYB0 399 aa13.1□□□□□ -0.31
LINC02411-201ENST00000540490 TOM1O60784 492 aa13.09□□□□□ -0.31
LINC02411-201ENST00000540490 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
LINC02411-201ENST00000540490 NUTM2GQ5VZR2 741 aa13.08□□□□□ -0.32
LINC02411-201ENST00000540490 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
LINC02411-201ENST00000540490 GGNBP2Q9H3C7 697 aa13.08□□□□□ -0.32
LINC02411-201ENST00000540490 SLIT3O75094 1523 aa13.08□□□□□ -0.32
LINC02411-201ENST00000540490 NFAT5O94916 1531 aa13.08□□□□□ -0.32
LINC02411-201ENST00000540490 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
LINC02411-201ENST00000540490 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
LINC02411-201ENST00000540490 FYB1O15117 783 aa13.07□□□□□ -0.32
LINC02411-201ENST00000540490 PSME1Q06323 249 aa13.07□□□□□ -0.32
LINC02411-201ENST00000540490 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
LINC02411-201ENST00000540490 PEAK1Q9H792 1746 aa13.06□□□□□ -0.32
LINC02411-201ENST00000540490 FBLN1P23142 703 aa13.06□□□□□ -0.32
LINC02411-201ENST00000540490 SPATA31A3Q5VYP0 1347 aa13.06□□□□□ -0.32
LINC02411-201ENST00000540490 PARD3Q8TEW0 1356 aa13.06□□□□□ -0.32
LINC02411-201ENST00000540490 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
LINC02411-201ENST00000540490 DIEXFQ68CQ4 756 aaKnown RBP13.05□□□□□ -0.32
LINC02411-201ENST00000540490 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 CGNL1Q0VF96 1302 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 TTC21AQ8NDW8 1320 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 SHPRHQ149N8 1683 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 USP31Q70CQ4 1352 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 PNPLA6Q8IY17 1366 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 NPC1L1Q9UHC9 1359 aa13.05□□□□□ -0.32
LINC02411-201ENST00000540490 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
LINC02411-201ENST00000540490 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
LINC02411-201ENST00000540490 USP19O94966 1318 aa13.04□□□□□ -0.32
LINC02411-201ENST00000540490 HSPA1LP34931 641 aa13.03□□□□□ -0.32
LINC02411-201ENST00000540490 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
LINC02411-201ENST00000540490 NSD2O96028 1365 aa13.03□□□□□ -0.32
LINC02411-201ENST00000540490 LTN1O94822 1766 aa13.02□□□□□ -0.32
LINC02411-201ENST00000540490 CABLES1Q8TDN4 633 aa13.02□□□□□ -0.33
LINC02411-201ENST00000540490 TNNT2P45379 298 aaPredicted RBP13.01□□□□□ -0.33
LINC02411-201ENST00000540490 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
LINC02411-201ENST00000540490 ABTB2Q8N961 1025 aa13.01□□□□□ -0.33
LINC02411-201ENST00000540490 PRKRIP1Q9H875 184 aaPredicted RBP13.01□□□□□ -0.33
LINC02411-201ENST00000540490 LRP6O75581 1613 aa13.01□□□□□ -0.33
LINC02411-201ENST00000540490 SMG6Q86US8 1419 aaKnown RBP13□□□□□ -0.33
LINC02411-201ENST00000540490 ARHGEF10O15013 1369 aa13□□□□□ -0.33
LINC02411-201ENST00000540490 SOX12O15370 315 aa13□□□□□ -0.33
LINC02411-201ENST00000540490 COL3A1P02461 1466 aaPredicted RBP12.99□□□□□ -0.33
LINC02411-201ENST00000540490 NLRP6P59044 892 aa12.99□□□□□ -0.33
LINC02411-201ENST00000540490 COL18A1P39060 1754 aa12.99□□□□□ -0.33
LINC02411-201ENST00000540490 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
LINC02411-201ENST00000540490 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
LINC02411-201ENST00000540490 MIER1Q8N108 512 aa12.98□□□□□ -0.33
LINC02411-201ENST00000540490 LMO7Q8WWI1 1683 aa12.98□□□□□ -0.33
LINC02411-201ENST00000540490 RRS1Q15050 365 aaKnown RBP12.97□□□□□ -0.33
LINC02411-201ENST00000540490 MORC1Q86VD1 984 aa12.97□□□□□ -0.33
LINC02411-201ENST00000540490 COG3Q96JB2 828 aa12.97□□□□□ -0.33
LINC02411-201ENST00000540490 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
LINC02411-201ENST00000540490 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
LINC02411-201ENST00000540490 RGPD5Q99666 1765 aa12.96□□□□□ -0.34
LINC02411-201ENST00000540490 MAP3K19Q56UN5 1328 aa12.95□□□□□ -0.34
LINC02411-201ENST00000540490 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
LINC02411-201ENST00000540490 PLCH1Q4KWH8 1693 aa12.95□□□□□ -0.34
LINC02411-201ENST00000540490 AATKQ6ZMQ8 1374 aa12.94□□□□□ -0.34
LINC02411-201ENST00000540490 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
LINC02411-201ENST00000540490 JCADQ9P266 1359 aa12.94□□□□□ -0.34
LINC02411-201ENST00000540490 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
LINC02411-201ENST00000540490 ADRA2BP18089 450 aa12.94□□□□□ -0.34
LINC02411-201ENST00000540490 MYBBP1AQ9BQG0 1328 aaKnown RBP12.93□□□□□ -0.34
LINC02411-201ENST00000540490 ANP32CO43423 234 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 GCP02774 474 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 NLRP13Q86W25 1043 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 POLKQ9UBT6 870 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 NRAPQ86VF7 1730 aa12.93□□□□□ -0.34
LINC02411-201ENST00000540490 ZC3H6P61129 1189 aaKnown RBP12.92□□□□□ -0.34
LINC02411-201ENST00000540490 RALBP1Q15311 655 aa12.92□□□□□ -0.34
LINC02411-201ENST00000540490 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
LINC02411-201ENST00000540490 RGPD1P0DJD0 1748 aa12.91□□□□□ -0.34
LINC02411-201ENST00000540490 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
LINC02411-201ENST00000540490 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
LINC02411-201ENST00000540490 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
LINC02411-201ENST00000540490 CPDO75976 1380 aa12.91□□□□□ -0.34
LINC02411-201ENST00000540490 COL14A1Q05707 1796 aaKnown RBP12.9□□□□□ -0.34
LINC02411-201ENST00000540490 MTHFSP49914 203 aa12.9□□□□□ -0.34
LINC02411-201ENST00000540490 ABCC6O95255 1503 aa12.89□□□□□ -0.35
LINC02411-201ENST00000540490 ZBTB7CA1YPR0 619 aa12.89□□□□□ -0.35
LINC02411-201ENST00000540490 AXIN2Q9Y2T1 843 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms