RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 NAIPQ13075 1403 aa13.42□□□□□ -0.26
TRAPPC1-202ENST00000540486 ARHGEF10O15013 1369 aa13.42□□□□□ -0.26
TRAPPC1-202ENST00000540486 UTRNP46939 3433 aa13.41□□□□□ -0.26
TRAPPC1-202ENST00000540486 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
TRAPPC1-202ENST00000540486 FAM50AQ14320 339 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-202ENST00000540486 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
TRAPPC1-202ENST00000540486 TNS1Q9HBL0 1735 aaKnown RBP13.41□□□□□ -0.26
TRAPPC1-202ENST00000540486 LMOD2Q6P5Q4 547 aa13.4□□□□□ -0.26
TRAPPC1-202ENST00000540486 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
TRAPPC1-202ENST00000540486 PLEKHG5O94827 1062 aa13.38□□□□□ -0.27
TRAPPC1-202ENST00000540486 PHF8Q9UPP1 1060 aa13.38□□□□□ -0.27
TRAPPC1-202ENST00000540486 ROCK1Q13464 1354 aa13.36□□□□□ -0.27
TRAPPC1-202ENST00000540486 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
TRAPPC1-202ENST00000540486 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC1-202ENST00000540486 WAPLQ7Z5K2 1190 aa13.36□□□□□ -0.27
TRAPPC1-202ENST00000540486 KIF1AQ12756 1690 aa13.36□□□□□ -0.27
TRAPPC1-202ENST00000540486 CAMTA1Q9Y6Y1 1673 aa13.35□□□□□ -0.27
TRAPPC1-202ENST00000540486 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
TRAPPC1-202ENST00000540486 RRBP1Q9P2E9 1410 aaKnown RBP13.35□□□□□ -0.27
TRAPPC1-202ENST00000540486 RREB1Q92766 1687 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 NRAPQ86VF7 1730 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 SYT17Q9BSW7 474 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 SPATA31A1Q5TZJ5 1347 aa13.34□□□□□ -0.27
TRAPPC1-202ENST00000540486 TECPR2O15040 1411 aa13.33□□□□□ -0.28
TRAPPC1-202ENST00000540486 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
TRAPPC1-202ENST00000540486 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC1-202ENST00000540486 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
TRAPPC1-202ENST00000540486 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
TRAPPC1-202ENST00000540486 STK26Q9P289 416 aa13.32□□□□□ -0.28
TRAPPC1-202ENST00000540486 NUP188Q5SRE5 1749 aa13.32□□□□□ -0.28
TRAPPC1-202ENST00000540486 ABCC11Q96J66 1382 aa13.32□□□□□ -0.28
TRAPPC1-202ENST00000540486 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
TRAPPC1-202ENST00000540486 ITGAEP38570 1179 aa13.31□□□□□ -0.28
TRAPPC1-202ENST00000540486 PTGER2P43116 358 aa13.31□□□□□ -0.28
TRAPPC1-202ENST00000540486 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 PLSCR1O15162 318 aa13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 SIRT1Q96EB6 747 aa13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 FHDC1Q9C0D6 1143 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 CLTCL1P53675 1640 aa13.3□□□□□ -0.28
TRAPPC1-202ENST00000540486 PRDM11Q9NQV5 511 aa13.29□□□□□ -0.28
TRAPPC1-202ENST00000540486 CHD4Q14839 1912 aa13.29□□□□□ -0.28
TRAPPC1-202ENST00000540486 ABCA3Q99758 1704 aa13.28□□□□□ -0.28
TRAPPC1-202ENST00000540486 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
TRAPPC1-202ENST00000540486 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
TRAPPC1-202ENST00000540486 KIF1BO60333 1816 aa13.27□□□□□ -0.28
TRAPPC1-202ENST00000540486 ZBTB7AO95365 584 aa13.27□□□□□ -0.29
TRAPPC1-202ENST00000540486 NRKQ7Z2Y5 1582 aa13.27□□□□□ -0.29
TRAPPC1-202ENST00000540486 SPDYE4A6NLX3 237 aa13.25□□□□□ -0.29
TRAPPC1-202ENST00000540486 PMFBP1Q8TBY8 1022 aa13.25□□□□□ -0.29
TRAPPC1-202ENST00000540486 ANO8Q9HCE9 1232 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC1-202ENST00000540486 STRN4Q9NRL3 753 aa13.25□□□□□ -0.29
TRAPPC1-202ENST00000540486 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
TRAPPC1-202ENST00000540486 PDGFDQ9GZP0 370 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-202ENST00000540486 USP35Q9P2H5 1018 aa13.24□□□□□ -0.29
TRAPPC1-202ENST00000540486 EVA1CP58658 441 aa13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 GPR162Q16538 588 aa13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 TMEM132EQ6IEE7 984 aa13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 BCL11BQ9C0K0 894 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
TRAPPC1-202ENST00000540486 ADGRF5Q8IZF2 1346 aa13.22□□□□□ -0.29
TRAPPC1-202ENST00000540486 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
TRAPPC1-202ENST00000540486 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC1-202ENST00000540486 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
TRAPPC1-202ENST00000540486 CASZ1Q86V15 1759 aa13.22□□□□□ -0.29
TRAPPC1-202ENST00000540486 MAP3K5Q99683 1374 aa13.21□□□□□ -0.29
TRAPPC1-202ENST00000540486 SGIP1Q9BQI5 828 aa13.21□□□□□ -0.29
TRAPPC1-202ENST00000540486 MYOM1P52179 1685 aa13.21□□□□□ -0.3
TRAPPC1-202ENST00000540486 ANKARQ7Z5J8 1434 aa13.21□□□□□ -0.3
TRAPPC1-202ENST00000540486 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 DLC1Q96QB1 1528 aa13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 FKBP8Q14318 412 aa13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 ARXQ96QS3 562 aa13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 STK32BQ9NY57 414 aa13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 YTHDC2Q9H6S0 1430 aaKnown RBP13.2□□□□□ -0.3
TRAPPC1-202ENST00000540486 ACIN1Q9UKV3 1341 aaKnown RBP13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 HSPA6P17066 643 aa13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 CHRNA2Q15822 529 aa13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 PROM2Q8N271 834 aa13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
TRAPPC1-202ENST00000540486 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 PPLO60437 1756 aa13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 DHX57Q6P158 1386 aaKnown RBP13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 RGPD3A6NKT7 1758 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 RGPD4Q7Z3J3 1758 aa13.17□□□□□ -0.3
TRAPPC1-202ENST00000540486 OVOS2A0A0G2JMS6 1433 aa13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 OVOS2A0A0J9YW53 1432 aa13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 OVOS2Q6IE36 1432 aa13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC1-202ENST00000540486 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms