RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 USP6P35125 1406 aa9.28□□□□□ -0.92
CDH19-203ENST00000540086 TTC21BQ7Z4L5 1316 aa9.27□□□□□ -0.92
CDH19-203ENST00000540086 POLR3AO14802 1390 aaPredicted RBP9.27□□□□□ -0.93
CDH19-203ENST00000540086 ESCO1Q5FWF5 840 aa9.27□□□□□ -0.93
CDH19-203ENST00000540086 PHF8Q9UPP1 1060 aa9.27□□□□□ -0.93
CDH19-203ENST00000540086 DMRT2Q9Y5R5 561 aa9.27□□□□□ -0.93
CDH19-203ENST00000540086 FMN2Q9NZ56 1722 aa9.27□□□□□ -0.93
CDH19-203ENST00000540086 SENP3-EIF4A1A0A087X0R7 540 aa9.26□□□□□ -0.93
CDH19-203ENST00000540086 MTHFSP49914 203 aa9.26□□□□□ -0.93
CDH19-203ENST00000540086 ORAI2Q96SN7 254 aa9.26□□□□□ -0.93
CDH19-203ENST00000540086 STRCP1A6NGW2 1772 aa9.26□□□□□ -0.93
CDH19-203ENST00000540086 ATF3P18847 181 aa9.25□□□□□ -0.93
CDH19-203ENST00000540086 FBLN1P23142 703 aa9.25□□□□□ -0.93
CDH19-203ENST00000540086 WDR43Q15061 677 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH19-203ENST00000540086 COG3Q96JB2 828 aa9.25□□□□□ -0.93
CDH19-203ENST00000540086 SSH2Q76I76 1423 aa9.25□□□□□ -0.93
CDH19-203ENST00000540086 NCOA3Q9Y6Q9 1424 aa9.24□□□□□ -0.93
CDH19-203ENST00000540086 C1orf167Q5SNV9 1468 aa9.24□□□□□ -0.93
CDH19-203ENST00000540086 LRRC7Q96NW7 1537 aa9.24□□□□□ -0.93
CDH19-203ENST00000540086 ADAMTS8Q9UP79 889 aa9.24□□□□□ -0.93
CDH19-203ENST00000540086 MSH6P52701 1360 aa9.24□□□□□ -0.93
CDH19-203ENST00000540086 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 PAK3O75914 559 aaPredicted RBP9.23□□□□□ -0.93
CDH19-203ENST00000540086 CFAP53Q96M91 514 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 ITSN1Q15811 1721 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 XPCQ01831 940 aaPredicted RBP9.23□□□□□ -0.93
CDH19-203ENST00000540086 PSME1Q06323 249 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 CADPS2Q86UW7 1296 aa9.23□□□□□ -0.93
CDH19-203ENST00000540086 DCCP43146 1447 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 MST1RQ04912 1400 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 NRKQ7Z2Y5 1582 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 OVOS2A0A0J9YW53 1432 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
CDH19-203ENST00000540086 SOX12O15370 315 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 FOXO3O43524 673 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 OVOS2Q6IE36 1432 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 SCAF1Q9H7N4 1312 aaKnown RBP9.22□□□□□ -0.93
CDH19-203ENST00000540086 POLKQ9UBT6 870 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 EMILIN1Q9Y6C2 1016 aa9.22□□□□□ -0.93
CDH19-203ENST00000540086 RRS1Q15050 365 aaKnown RBP9.21□□□□□ -0.93
CDH19-203ENST00000540086 RGPD8O14715 1765 aaPredicted RBP9.21□□□□□ -0.94
CDH19-203ENST00000540086 ZBED9Q6R2W3 1325 aa9.21□□□□□ -0.94
CDH19-203ENST00000540086 NLRP6P59044 892 aa9.21□□□□□ -0.94
CDH19-203ENST00000540086 KIF20BQ96Q89 1820 aa9.21□□□□□ -0.94
CDH19-203ENST00000540086 BLMP54132 1417 aaPredicted RBP9.2□□□□□ -0.94
CDH19-203ENST00000540086 AATKQ6ZMQ8 1374 aa9.2□□□□□ -0.94
CDH19-203ENST00000540086 CCDC146Q8IYE0 955 aa9.2□□□□□ -0.94
CDH19-203ENST00000540086 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
CDH19-203ENST00000540086 SALL2Q9Y467 1007 aaPredicted RBP9.2□□□□□ -0.94
CDH19-203ENST00000540086 USP31Q70CQ4 1352 aa9.19□□□□□ -0.94
CDH19-203ENST00000540086 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
CDH19-203ENST00000540086 ANKRD26Q9UPS8 1709 aa9.19□□□□□ -0.94
CDH19-203ENST00000540086 INSRP06213 1382 aa9.19□□□□□ -0.94
CDH19-203ENST00000540086 KRT28Q7Z3Y7 464 aa9.19□□□□□ -0.94
CDH19-203ENST00000540086 COL3A1P02461 1466 aaPredicted RBP9.19□□□□□ -0.94
CDH19-203ENST00000540086 PNPLA6Q8IY17 1366 aa9.18□□□□□ -0.94
CDH19-203ENST00000540086 U2SURPO15042 1029 aaKnown RBP9.18□□□□□ -0.94
CDH19-203ENST00000540086 SMG6Q86US8 1419 aaKnown RBP9.18□□□□□ -0.94
CDH19-203ENST00000540086 DIAPH1O60610 1272 aaKnown RBP9.17□□□□□ -0.94
CDH19-203ENST00000540086 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 U2AF1L5P0DN76 240 aaPredicted RBP9.17□□□□□ -0.94
CDH19-203ENST00000540086 U2AF1Q01081 240 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDH19-203ENST00000540086 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 PIK3C2AO00443 1686 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 BRINP3Q76B58 766 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 NUDCQ9Y266 331 aa9.17□□□□□ -0.94
CDH19-203ENST00000540086 MAP3K19Q56UN5 1328 aa9.16□□□□□ -0.94
CDH19-203ENST00000540086 CDK12Q9NYV4 1490 aaPredicted RBP9.16□□□□□ -0.94
CDH19-203ENST00000540086 APAF1O14727 1248 aa9.15□□□□□ -0.94
CDH19-203ENST00000540086 XIRP1Q702N8 1843 aaKnown RBP9.15□□□□□ -0.94
CDH19-203ENST00000540086 NPHP3Q7Z494 1330 aa9.15□□□□□ -0.94
CDH19-203ENST00000540086 SHPRHQ149N8 1683 aa9.15□□□□□ -0.94
CDH19-203ENST00000540086 IL13P35225 146 aa9.15□□□□□ -0.95
CDH19-203ENST00000540086 KIF1AQ12756 1690 aa9.15□□□□□ -0.95
CDH19-203ENST00000540086 AMPHP49418 695 aa9.14□□□□□ -0.95
CDH19-203ENST00000540086 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
CDH19-203ENST00000540086 RUNDC1Q96C34 613 aa9.14□□□□□ -0.95
CDH19-203ENST00000540086 EIF4A2Q14240 407 aaKnown RBP9.13□□□□□ -0.95
CDH19-203ENST00000540086 SBNO1A3KN83 1393 aa9.13□□□□□ -0.95
CDH19-203ENST00000540086 ZBTB7CA1YPR0 619 aa9.13□□□□□ -0.95
CDH19-203ENST00000540086 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
CDH19-203ENST00000540086 LTBP4Q8N2S1 1624 aa9.13□□□□□ -0.95
CDH19-203ENST00000540086 PXDNQ92626 1479 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 FLT4P35916 1363 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 GCP02774 474 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 HMOX1P09601 288 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 TCP11L2Q8N4U5 519 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 USP19O94966 1318 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 NEUROD2Q15784 382 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 KCNH5Q8NCM2 988 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 CDCA7LQ96GN5 454 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 PLEKHF1Q96S99 279 aa9.12□□□□□ -0.95
CDH19-203ENST00000540086 HOXC9P31274 260 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 PRKAR2BP31323 418 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 TNS3Q68CZ2 1445 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms