RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 APAF1O14727 1248 aa22.59■■□□□ 1.21
LTBR-207ENST00000539925 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
LTBR-207ENST00000539925 RCAN3Q9UKA8 241 aa22.58■■□□□ 1.21
LTBR-207ENST00000539925 COL3A1P02461 1466 aaPredicted RBP22.58■■□□□ 1.2
LTBR-207ENST00000539925 ACEP12821 1306 aa22.57■■□□□ 1.2
LTBR-207ENST00000539925 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
LTBR-207ENST00000539925 USP6P35125 1406 aa22.57■■□□□ 1.2
LTBR-207ENST00000539925 CCDC146Q8IYE0 955 aa22.57■■□□□ 1.2
LTBR-207ENST00000539925 DIAPH1O60610 1272 aaKnown RBP22.56■■□□□ 1.2
LTBR-207ENST00000539925 U2AF1L5P0DN76 240 aaPredicted RBP22.55■■□□□ 1.2
LTBR-207ENST00000539925 U2AF1Q01081 240 aaKnown RBP eCLIP22.55■■□□□ 1.2
LTBR-207ENST00000539925 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
LTBR-207ENST00000539925 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
LTBR-207ENST00000539925 E9PSI1 815 aa22.55■■□□□ 1.2
LTBR-207ENST00000539925 PPP4R2Q9NY27 417 aa22.55■■□□□ 1.2
LTBR-207ENST00000539925 NME9Q86XW9 330 aa22.53■■□□□ 1.2
LTBR-207ENST00000539925 CDCA7LQ96GN5 454 aa22.53■■□□□ 1.2
LTBR-207ENST00000539925 POLKQ9UBT6 870 aa22.53■■□□□ 1.2
LTBR-207ENST00000539925 IQSEC2Q5JU85 1478 aa22.53■■□□□ 1.2
LTBR-207ENST00000539925 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
LTBR-207ENST00000539925 NRKQ7Z2Y5 1582 aa22.53■■□□□ 1.2
LTBR-207ENST00000539925 SENP3-EIF4A1A0A087X0R7 540 aa22.52■■□□□ 1.2
LTBR-207ENST00000539925 SLFN5Q08AF3 891 aa22.52■■□□□ 1.2
LTBR-207ENST00000539925 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
LTBR-207ENST00000539925 SSH2Q76I76 1423 aa22.52■■□□□ 1.2
LTBR-207ENST00000539925 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
LTBR-207ENST00000539925 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
LTBR-207ENST00000539925 DUSP27Q5VZP5 1158 aa22.5■■□□□ 1.19
LTBR-207ENST00000539925 WDR63Q8IWG1 891 aa22.5■■□□□ 1.19
LTBR-207ENST00000539925 TCP11L2Q8N4U5 519 aa22.5■■□□□ 1.19
LTBR-207ENST00000539925 NGDNQ8NEJ9 315 aaKnown RBP22.5■■□□□ 1.19
LTBR-207ENST00000539925 FMN2Q9NZ56 1722 aa22.5■■□□□ 1.19
LTBR-207ENST00000539925 ADGRL3Q9HAR2 1447 aa22.5■■□□□ 1.19
LTBR-207ENST00000539925 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
LTBR-207ENST00000539925 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
LTBR-207ENST00000539925 FCHSD2O94868 740 aa22.49■■□□□ 1.19
LTBR-207ENST00000539925 RRP1P56182 461 aaKnown RBP22.49■■□□□ 1.19
LTBR-207ENST00000539925 OVOS2A0A0J9YW53 1432 aa22.48■■□□□ 1.19
LTBR-207ENST00000539925 OVOS2Q6IE36 1432 aa22.48■■□□□ 1.19
LTBR-207ENST00000539925 U2SURPO15042 1029 aaKnown RBP22.48■■□□□ 1.19
LTBR-207ENST00000539925 NEFMP07197 916 aa22.48■■□□□ 1.19
LTBR-207ENST00000539925 WWC1Q8IX03 1113 aa22.48■■□□□ 1.19
LTBR-207ENST00000539925 MAPK8IP3Q9UPT6 1336 aa22.47■■□□□ 1.19
LTBR-207ENST00000539925 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
LTBR-207ENST00000539925 NUTM2FA1L443 756 aa22.45■■□□□ 1.18
LTBR-207ENST00000539925 IRX6P78412 446 aaPredicted RBP22.45■■□□□ 1.18
LTBR-207ENST00000539925 PLEKHF1Q96S99 279 aa22.44■■□□□ 1.18
LTBR-207ENST00000539925 MAP2P11137 1827 aaKnown RBP22.44■■□□□ 1.18
LTBR-207ENST00000539925 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.43■■□□□ 1.18
LTBR-207ENST00000539925 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
LTBR-207ENST00000539925 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
LTBR-207ENST00000539925 PPM1GO15355 546 aaPredicted RBP22.41■■□□□ 1.18
LTBR-207ENST00000539925 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
LTBR-207ENST00000539925 NCOA3Q9Y6Q9 1424 aa22.4■■□□□ 1.18
LTBR-207ENST00000539925 IL13P35225 146 aa22.39■■□□□ 1.18
LTBR-207ENST00000539925 MYH16Q9H6N6 1097 aa22.39■■□□□ 1.18
LTBR-207ENST00000539925 PHF8Q9UPP1 1060 aa22.39■■□□□ 1.18
LTBR-207ENST00000539925 EMILIN1Q9Y6C2 1016 aa22.39■■□□□ 1.18
LTBR-207ENST00000539925 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
LTBR-207ENST00000539925 IL16Q14005 1332 aa22.38■■□□□ 1.17
LTBR-207ENST00000539925 KIF24Q5T7B8 1368 aa22.38■■□□□ 1.17
LTBR-207ENST00000539925 TMPOP42166 694 aaKnown RBP22.38■■□□□ 1.17
LTBR-207ENST00000539925 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
LTBR-207ENST00000539925 RSPH6AQ9H0K4 717 aa22.36■■□□□ 1.17
LTBR-207ENST00000539925 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
LTBR-207ENST00000539925 CT47B1P0C2W7 299 aaPredicted RBP22.35■■□□□ 1.17
LTBR-207ENST00000539925 NEUROD2Q15784 382 aa22.35■■□□□ 1.17
LTBR-207ENST00000539925 PROSER2Q86WR7 435 aaPredicted RBP22.35■■□□□ 1.17
LTBR-207ENST00000539925 USP54Q70EL1 1684 aa22.35■■□□□ 1.17
LTBR-207ENST00000539925 CALD1Q05682 793 aaKnown RBP22.33■■□□□ 1.17
LTBR-207ENST00000539925 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
LTBR-207ENST00000539925 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
LTBR-207ENST00000539925 C19orf44Q9H6X5 657 aa22.33■■□□□ 1.16
LTBR-207ENST00000539925 SBNO1A3KN83 1393 aa22.32■■□□□ 1.16
LTBR-207ENST00000539925 DCCP43146 1447 aa22.31■■□□□ 1.16
LTBR-207ENST00000539925 FLT4P35916 1363 aa22.31■■□□□ 1.16
LTBR-207ENST00000539925 PRKAR2BP31323 418 aa22.31■■□□□ 1.16
LTBR-207ENST00000539925 LMOD3Q0VAK6 560 aa22.31■■□□□ 1.16
LTBR-207ENST00000539925 SPINK5Q9NQ38 1064 aaPredicted RBP22.31■■□□□ 1.16
LTBR-207ENST00000539925 FBLN1P23142 703 aa22.3■■□□□ 1.16
LTBR-207ENST00000539925 NLRP6P59044 892 aa22.3■■□□□ 1.16
LTBR-207ENST00000539925 RIPK4P57078 832 aa22.3■■□□□ 1.16
LTBR-207ENST00000539925 PIK3C2AO00443 1686 aa22.29■■□□□ 1.16
LTBR-207ENST00000539925 NFE2L2Q16236 605 aa22.29■■□□□ 1.16
LTBR-207ENST00000539925 ESCO1Q5FWF5 840 aa22.28■■□□□ 1.16
LTBR-207ENST00000539925 PSME1Q06323 249 aa22.27■■□□□ 1.16
LTBR-207ENST00000539925 ABTB2Q8N961 1025 aa22.27■■□□□ 1.16
LTBR-207ENST00000539925 CCDC136Q96JN2 1154 aa22.27■■□□□ 1.16
LTBR-207ENST00000539925 TRIM35Q9UPQ4 493 aa22.27■■□□□ 1.16
LTBR-207ENST00000539925 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
LTBR-207ENST00000539925 EIF4A2Q14240 407 aaKnown RBP22.26■■□□□ 1.15
LTBR-207ENST00000539925 MAP3K19Q56UN5 1328 aa22.26■■□□□ 1.15
LTBR-207ENST00000539925 ARHGEF10O15013 1369 aa22.26■■□□□ 1.15
LTBR-207ENST00000539925 KIF1AQ12756 1690 aa22.25■■□□□ 1.15
LTBR-207ENST00000539925 RTL1A6NKG5 1358 aa22.25■■□□□ 1.15
LTBR-207ENST00000539925 AMPHP49418 695 aa22.24■■□□□ 1.15
LTBR-207ENST00000539925 PAK3O75914 559 aaPredicted RBP22.23■■□□□ 1.15
LTBR-207ENST00000539925 KCNH5Q8NCM2 988 aa22.23■■□□□ 1.15
LTBR-207ENST00000539925 HMOX1P09601 288 aa22.23■■□□□ 1.15
LTBR-207ENST00000539925 ATF3P18847 181 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms