RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 TTC21BQ7Z4L5 1316 aa29.26■■■□□ 2.27
C12orf43-208ENST00000539736 AMER1Q5JTC6 1135 aaPredicted RBP29.26■■■□□ 2.27
C12orf43-208ENST00000539736 KRT28Q7Z3Y7 464 aa29.26■■■□□ 2.27
C12orf43-208ENST00000539736 NHSL1Q5SYE7 1610 aa29.26■■■□□ 2.27
C12orf43-208ENST00000539736 TTC21AQ8NDW8 1320 aa29.25■■■□□ 2.27
C12orf43-208ENST00000539736 PXDNQ92626 1479 aa29.23■■■□□ 2.27
C12orf43-208ENST00000539736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.22■■■□□ 2.27
C12orf43-208ENST00000539736 DDX17Q92841 729 aaKnown RBP29.22■■■□□ 2.27
C12orf43-208ENST00000539736 NSD2O96028 1365 aa29.22■■■□□ 2.27
C12orf43-208ENST00000539736 TRPM3Q9HCF6 1732 aaPredicted RBP29.22■■■□□ 2.27
C12orf43-208ENST00000539736 SOS2Q07890 1332 aaPredicted RBP29.21■■■□□ 2.27
C12orf43-208ENST00000539736 AHDC1Q5TGY3 1603 aaPredicted RBP29.21■■■□□ 2.27
C12orf43-208ENST00000539736 PIP4K2BP78356 416 aa29.21■■■□□ 2.27
C12orf43-208ENST00000539736 SBNO1A3KN83 1393 aa29.21■■■□□ 2.27
C12orf43-208ENST00000539736 FYB1O15117 783 aa29.2■■■□□ 2.26
C12orf43-208ENST00000539736 XPCQ01831 940 aaPredicted RBP29.19■■■□□ 2.26
C12orf43-208ENST00000539736 KIF20BQ96Q89 1820 aa29.19■■■□□ 2.26
C12orf43-208ENST00000539736 PAK3O75914 559 aaPredicted RBP29.17■■■□□ 2.26
C12orf43-208ENST00000539736 NME9Q86XW9 330 aa29.16■■■□□ 2.26
C12orf43-208ENST00000539736 SCAF1Q9H7N4 1312 aaKnown RBP29.15■■■□□ 2.26
C12orf43-208ENST00000539736 USP31Q70CQ4 1352 aa29.14■■■□□ 2.26
C12orf43-208ENST00000539736 CC2D1BQ5T0F9 858 aaKnown RBP29.14■■■□□ 2.26
C12orf43-208ENST00000539736 PIK3C2AO00443 1686 aa29.14■■■□□ 2.26
C12orf43-208ENST00000539736 ANKRD26Q9UPS8 1709 aa29.14■■■□□ 2.25
C12orf43-208ENST00000539736 ALS2Q96Q42 1657 aa29.13■■■□□ 2.25
C12orf43-208ENST00000539736 ABTB2Q8N961 1025 aa29.13■■■□□ 2.25
C12orf43-208ENST00000539736 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
C12orf43-208ENST00000539736 TNS3Q68CZ2 1445 aa29.12■■■□□ 2.25
C12orf43-208ENST00000539736 ANP32CO43423 234 aa29.12■■■□□ 2.25
C12orf43-208ENST00000539736 GGNBP2Q9H3C7 697 aa29.12■■■□□ 2.25
C12orf43-208ENST00000539736 USP54Q70EL1 1684 aa29.11■■■□□ 2.25
C12orf43-208ENST00000539736 PARD3Q8TEW0 1356 aa29.1■■■□□ 2.25
C12orf43-208ENST00000539736 OVOS2A0A0J9YW53 1432 aa29.1■■■□□ 2.25
C12orf43-208ENST00000539736 OVOS2Q6IE36 1432 aa29.1■■■□□ 2.25
C12orf43-208ENST00000539736 PHLPP1O60346 1717 aa29.09■■■□□ 2.25
C12orf43-208ENST00000539736 RALBP1Q15311 655 aa29.09■■■□□ 2.25
C12orf43-208ENST00000539736 COG3Q96JB2 828 aa29.09■■■□□ 2.25
C12orf43-208ENST00000539736 PRKRIP1Q9H875 184 aaPredicted RBP29.09■■■□□ 2.25
C12orf43-208ENST00000539736 ZRANB1Q9UGI0 708 aa29.09■■■□□ 2.25
C12orf43-208ENST00000539736 ARHGEF10O15013 1369 aa29.09■■■□□ 2.25
C12orf43-208ENST00000539736 MORC1Q86VD1 984 aa29.08■■■□□ 2.25
C12orf43-208ENST00000539736 NLRP6P59044 892 aa29.07■■■□□ 2.24
C12orf43-208ENST00000539736 NLRP13Q86W25 1043 aa29.07■■■□□ 2.24
C12orf43-208ENST00000539736 LRRC59Q96AG4 307 aaKnown RBP29.07■■■□□ 2.24
C12orf43-208ENST00000539736 COL16A1Q07092 1604 aaPredicted RBP29.06■■■□□ 2.24
C12orf43-208ENST00000539736 CNGB1Q14028 1251 aaPredicted RBP29.06■■■□□ 2.24
C12orf43-208ENST00000539736 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
C12orf43-208ENST00000539736 LMOD2Q6P5Q4 547 aa29.04■■■□□ 2.24
C12orf43-208ENST00000539736 NUTM2GQ5VZR2 741 aa29.02■■■□□ 2.24
C12orf43-208ENST00000539736 USP19O94966 1318 aa29.01■■■□□ 2.23
C12orf43-208ENST00000539736 MED1Q15648 1581 aaPredicted RBP29■■■□□ 2.23
C12orf43-208ENST00000539736 SLIT3O75094 1523 aa28.99■■■□□ 2.23
C12orf43-208ENST00000539736 AATKQ6ZMQ8 1374 aa28.98■■■□□ 2.23
C12orf43-208ENST00000539736 MYBBP1AQ9BQG0 1328 aaKnown RBP28.96■■■□□ 2.23
C12orf43-208ENST00000539736 KCNH5Q8NCM2 988 aa28.96■■■□□ 2.23
C12orf43-208ENST00000539736 PNPLA6Q8IY17 1366 aa28.95■■■□□ 2.22
C12orf43-208ENST00000539736 COL22A1Q8NFW1 1626 aaPredicted RBP28.94■■■□□ 2.22
C12orf43-208ENST00000539736 PPP2R1AP30153 589 aa28.94■■■□□ 2.22
C12orf43-208ENST00000539736 TNNT2P45379 298 aaPredicted RBP28.94■■■□□ 2.22
C12orf43-208ENST00000539736 MIER1Q8N108 512 aa28.94■■■□□ 2.22
C12orf43-208ENST00000539736 CRYBG1Q9Y4K1 1723 aa28.94■■■□□ 2.22
C12orf43-208ENST00000539736 GCP02774 474 aa28.93■■■□□ 2.22
C12orf43-208ENST00000539736 PHRF1Q9P1Y6 1649 aaKnown RBP28.92■■■□□ 2.22
C12orf43-208ENST00000539736 NFAT5O94916 1531 aa28.91■■■□□ 2.22
C12orf43-208ENST00000539736 HSPA1LP34931 641 aa28.91■■■□□ 2.22
C12orf43-208ENST00000539736 MAP2P11137 1827 aaKnown RBP28.89■■■□□ 2.22
C12orf43-208ENST00000539736 SHPRHQ149N8 1683 aa28.89■■■□□ 2.21
C12orf43-208ENST00000539736 JCADQ9P266 1359 aa28.88■■■□□ 2.21
C12orf43-208ENST00000539736 FBLN1P23142 703 aa28.88■■■□□ 2.21
C12orf43-208ENST00000539736 CABLES1Q8TDN4 633 aa28.88■■■□□ 2.21
C12orf43-208ENST00000539736 POLKQ9UBT6 870 aa28.88■■■□□ 2.21
C12orf43-208ENST00000539736 ABCA3Q99758 1704 aa28.87■■■□□ 2.21
C12orf43-208ENST00000539736 SOX12O15370 315 aa28.87■■■□□ 2.21
C12orf43-208ENST00000539736 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
C12orf43-208ENST00000539736 CCER2I3L3R5 266 aa28.85■■■□□ 2.21
C12orf43-208ENST00000539736 MTHFSP49914 203 aa28.85■■■□□ 2.21
C12orf43-208ENST00000539736 PLEKHG5O94827 1062 aa28.84■■■□□ 2.21
C12orf43-208ENST00000539736 RRS1Q15050 365 aaKnown RBP28.84■■■□□ 2.21
C12orf43-208ENST00000539736 MAP3K19Q56UN5 1328 aa28.83■■■□□ 2.21
C12orf43-208ENST00000539736 KIF24Q5T7B8 1368 aa28.83■■■□□ 2.21
C12orf43-208ENST00000539736 ARHGEF25Q86VW2 580 aa28.82■■■□□ 2.2
C12orf43-208ENST00000539736 CPDO75976 1380 aa28.82■■■□□ 2.2
C12orf43-208ENST00000539736 HAP1P54257 671 aaPredicted RBP28.81■■■□□ 2.2
C12orf43-208ENST00000539736 EMILIN1Q9Y6C2 1016 aa28.81■■■□□ 2.2
C12orf43-208ENST00000539736 LTN1O94822 1766 aa28.8■■■□□ 2.2
C12orf43-208ENST00000539736 INSRP06213 1382 aa28.79■■■□□ 2.2
C12orf43-208ENST00000539736 CDK12Q9NYV4 1490 aaPredicted RBP28.78■■■□□ 2.2
C12orf43-208ENST00000539736 RTL1A6NKG5 1358 aa28.78■■■□□ 2.2
C12orf43-208ENST00000539736 ZC3H6P61129 1189 aaKnown RBP28.78■■■□□ 2.2
C12orf43-208ENST00000539736 SPATA31A6Q5VVP1 1343 aa28.77■■■□□ 2.2
C12orf43-208ENST00000539736 AMPHP49418 695 aa28.77■■■□□ 2.2
C12orf43-208ENST00000539736 PEAK1Q9H792 1746 aa28.77■■■□□ 2.2
C12orf43-208ENST00000539736 PPM1GO15355 546 aaPredicted RBP28.76■■■□□ 2.19
C12orf43-208ENST00000539736 CFAP53Q96M91 514 aa28.76■■■□□ 2.19
C12orf43-208ENST00000539736 FLT4P35916 1363 aa28.75■■■□□ 2.19
C12orf43-208ENST00000539736 KIAA0232Q92628 1395 aa28.75■■■□□ 2.19
C12orf43-208ENST00000539736 IP6K1Q92551 441 aa28.75■■■□□ 2.19
C12orf43-208ENST00000539736 ABCC6O95255 1503 aa28.74■■■□□ 2.19
C12orf43-208ENST00000539736 CCDC184Q52MB2 194 aa28.74■■■□□ 2.19
C12orf43-208ENST00000539736 HOXC9P31274 260 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms