RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SLC12A5Q9H2X9 1139 aa22.05■■□□□ 1.12
RAB40C-205ENST00000539661 EFCAB6Q5THR3 1501 aa22.05■■□□□ 1.12
RAB40C-205ENST00000539661 MROH1Q8NDA8 1641 aa22.05■■□□□ 1.12
RAB40C-205ENST00000539661 IL16Q14005 1332 aa22.04■■□□□ 1.12
RAB40C-205ENST00000539661 ITPRIPQ8IWB1 547 aa22.04■■□□□ 1.12
RAB40C-205ENST00000539661 ABCC11Q96J66 1382 aa22.04■■□□□ 1.12
RAB40C-205ENST00000539661 TPM2P07951 284 aa22.04■■□□□ 1.12
RAB40C-205ENST00000539661 ERBB4Q15303 1308 aa22.03■■□□□ 1.12
RAB40C-205ENST00000539661 NUCB1Q02818 461 aa22.03■■□□□ 1.12
RAB40C-205ENST00000539661 ADGRB3O60242 1522 aa22.03■■□□□ 1.12
RAB40C-205ENST00000539661 ZBTB40Q9NUA8 1239 aa22.03■■□□□ 1.12
RAB40C-205ENST00000539661 HSP90AB1P08238 724 aaKnown RBP22.02■■□□□ 1.12
RAB40C-205ENST00000539661 U2AF1L5P0DN76 240 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-205ENST00000539661 U2AF1Q01081 240 aaKnown RBP eCLIP22.02■■□□□ 1.12
RAB40C-205ENST00000539661 NUTM2DQ5VT03 806 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-205ENST00000539661 CHGAP10645 457 aaKnown RBP22.02■■□□□ 1.12
RAB40C-205ENST00000539661 SSH1Q8WYL5 1049 aa22.02■■□□□ 1.12
RAB40C-205ENST00000539661 PKNOX2Q96KN3 472 aa22.02■■□□□ 1.12
RAB40C-205ENST00000539661 NOS1P29475 1434 aa22.02■■□□□ 1.11
RAB40C-205ENST00000539661 EXOSC9Q06265 439 aaKnown RBP22.01■■□□□ 1.11
RAB40C-205ENST00000539661 KIF16BQ96L93 1317 aa22.01■■□□□ 1.11
RAB40C-205ENST00000539661 ABCA9Q8IUA7 1624 aa22.01■■□□□ 1.11
RAB40C-205ENST00000539661 ADGRB1O14514 1584 aa22■■□□□ 1.11
RAB40C-205ENST00000539661 CFAP74Q9C0B2 1584 aa22■■□□□ 1.11
RAB40C-205ENST00000539661 IPO8O15397 1037 aaKnown RBP22■■□□□ 1.11
RAB40C-205ENST00000539661 BMP2KLQ5H9B9 411 aa22■■□□□ 1.11
RAB40C-205ENST00000539661 GAS2L3Q86XJ1 694 aa21.99■■□□□ 1.11
RAB40C-205ENST00000539661 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
RAB40C-205ENST00000539661 IBTKQ9P2D0 1353 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-205ENST00000539661 LMTK2Q8IWU2 1503 aa21.99■■□□□ 1.11
RAB40C-205ENST00000539661 CCDC173Q0VFZ6 552 aa21.99■■□□□ 1.11
RAB40C-205ENST00000539661 TSR2Q969E8 191 aaKnown RBP21.99■■□□□ 1.11
RAB40C-205ENST00000539661 CLEC17AQ6ZS10 378 aa21.98■■□□□ 1.11
RAB40C-205ENST00000539661 C14orf93Q9H972 538 aaKnown RBP21.98■■□□□ 1.11
RAB40C-205ENST00000539661 NOB1Q9ULX3 412 aaKnown RBP21.98■■□□□ 1.11
RAB40C-205ENST00000539661 PPP1R9BQ96SB3 815 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 PPLO60437 1756 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 CHD1LQ86WJ1 897 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 TMEM57Q8N5G2 664 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 PLEKHF1Q96S99 279 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 CD109Q6YHK3 1445 aa21.97■■□□□ 1.11
RAB40C-205ENST00000539661 TMPOP42166 694 aaKnown RBP21.96■■□□□ 1.11
RAB40C-205ENST00000539661 TRAK1Q9UPV9 953 aa21.96■■□□□ 1.11
RAB40C-205ENST00000539661 PPRC1Q5VV67 1664 aaKnown RBP21.96■■□□□ 1.11
RAB40C-205ENST00000539661 REREQ9P2R6 1566 aa21.96■■□□□ 1.11
RAB40C-205ENST00000539661 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.11
RAB40C-205ENST00000539661 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
RAB40C-205ENST00000539661 GOLGA6L22H0YM25 854 aa21.94■■□□□ 1.1
RAB40C-205ENST00000539661 ALDH1L2Q3SY69 923 aa21.94■■□□□ 1.1
RAB40C-205ENST00000539661 KIF2CQ99661 725 aa21.94■■□□□ 1.1
RAB40C-205ENST00000539661 ARHGAP31Q2M1Z3 1444 aa21.94■■□□□ 1.1
RAB40C-205ENST00000539661 K7ELQ4 463 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-205ENST00000539661 CHMP4BQ9H444 224 aaKnown RBP21.93■■□□□ 1.1
RAB40C-205ENST00000539661 MED14O60244 1454 aa21.92■■□□□ 1.1
RAB40C-205ENST00000539661 COL3A1P02461 1466 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-205ENST00000539661 EVC2Q86UK5 1308 aa21.92■■□□□ 1.1
RAB40C-205ENST00000539661 GCC1Q96CN9 775 aa21.92■■□□□ 1.1
RAB40C-205ENST00000539661 LNPKQ9C0E8 428 aa21.92■■□□□ 1.1
RAB40C-205ENST00000539661 ZMYND15Q9H091 742 aa21.92■■□□□ 1.1
RAB40C-205ENST00000539661 BRPF1P55201 1214 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-205ENST00000539661 ANP32BQ92688 251 aaKnown RBP21.91■■□□□ 1.1
RAB40C-205ENST00000539661 KLHL40Q2TBA0 621 aa21.91■■□□□ 1.1
RAB40C-205ENST00000539661 ZSCAN30Q86W11 494 aa21.91■■□□□ 1.1
RAB40C-205ENST00000539661 ZNF428Q96B54 188 aa21.91■■□□□ 1.1
RAB40C-205ENST00000539661 RPGRIP1LQ68CZ1 1315 aa21.9■■□□□ 1.1
RAB40C-205ENST00000539661 KIDINS220Q9ULH0 1771 aa21.9■■□□□ 1.1
RAB40C-205ENST00000539661 NASPP49321 788 aaPredicted RBP21.9■■□□□ 1.1
RAB40C-205ENST00000539661 TERF1P54274 439 aa21.9■■□□□ 1.1
RAB40C-205ENST00000539661 TULP4Q9NRJ4 1543 aa21.89■■□□□ 1.1
RAB40C-205ENST00000539661 PDCL3Q9H2J4 239 aa21.89■■□□□ 1.09
RAB40C-205ENST00000539661 ARHGEF28Q8N1W1 1705 aaKnown RBP21.87■■□□□ 1.09
RAB40C-205ENST00000539661 GLI2P10070 1586 aa21.87■■□□□ 1.09
RAB40C-205ENST00000539661 HS1BP3Q53T59 392 aa21.86■■□□□ 1.09
RAB40C-205ENST00000539661 OFD1O75665 1012 aa21.86■■□□□ 1.09
RAB40C-205ENST00000539661 CFAP44Q96MT7 982 aa21.86■■□□□ 1.09
RAB40C-205ENST00000539661 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
RAB40C-205ENST00000539661 U2SURPO15042 1029 aaKnown RBP21.85■■□□□ 1.09
RAB40C-205ENST00000539661 CD2BP2O95400 341 aaKnown RBP21.85■■□□□ 1.09
RAB40C-205ENST00000539661 TBC1D9Q6ZT07 1266 aa21.85■■□□□ 1.09
RAB40C-205ENST00000539661 PIK3R4Q99570 1358 aa21.84■■□□□ 1.09
RAB40C-205ENST00000539661 ZNF445P59923 1031 aa21.84■■□□□ 1.09
RAB40C-205ENST00000539661 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
RAB40C-205ENST00000539661 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.84■■□□□ 1.09
RAB40C-205ENST00000539661 KIAA1211Q6ZU35 1233 aa21.84■■□□□ 1.09
RAB40C-205ENST00000539661 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
RAB40C-205ENST00000539661 BAG4O95429 457 aaKnown RBP21.83■■□□□ 1.09
RAB40C-205ENST00000539661 SSFA2P28290 1259 aa21.83■■□□□ 1.09
RAB40C-205ENST00000539661 RIPK4P57078 832 aa21.83■■□□□ 1.09
RAB40C-205ENST00000539661 ANKRD45Q5TZF3 282 aa21.83■■□□□ 1.08
RAB40C-205ENST00000539661 ARHGAP45Q92619 1136 aa21.83■■□□□ 1.08
RAB40C-205ENST00000539661 DDX49Q9Y6V7 483 aaKnown RBP21.83■■□□□ 1.08
RAB40C-205ENST00000539661 MSNP26038 577 aaKnown RBP21.82■■□□□ 1.08
RAB40C-205ENST00000539661 GAS2L2Q8NHY3 880 aa21.82■■□□□ 1.08
RAB40C-205ENST00000539661 ZBTB7BO15156 539 aaPredicted RBP21.81■■□□□ 1.08
RAB40C-205ENST00000539661 CDC45O75419 566 aa21.8■■□□□ 1.08
RAB40C-205ENST00000539661 NUCB2P80303 420 aa21.8■■□□□ 1.08
RAB40C-205ENST00000539661 PTCH1Q13635 1447 aa21.8■■□□□ 1.08
RAB40C-205ENST00000539661 RABEP1Q15276 862 aa21.79■■□□□ 1.08
RAB40C-205ENST00000539661 CDC42BPGQ6DT37 1551 aa21.79■■□□□ 1.08
RAB40C-205ENST00000539661 FOXD4L1Q9NU39 408 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms