RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
RTN4IP1-204ENST00000539449 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
RTN4IP1-204ENST00000539449 PANK3Q9H999 370 aa12.66□□□□□ -0.38
RTN4IP1-204ENST00000539449 COL22A1Q8NFW1 1626 aaPredicted RBP12.66□□□□□ -0.38
RTN4IP1-204ENST00000539449 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
RTN4IP1-204ENST00000539449 CDK19Q9BWU1 502 aa12.65□□□□□ -0.38
RTN4IP1-204ENST00000539449 GLI3P10071 1580 aa12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 PER1O15534 1290 aaPredicted RBP12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 SLC12A5Q9H2X9 1139 aa12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.64□□□□□ -0.39
RTN4IP1-204ENST00000539449 CNGB1Q14028 1251 aaPredicted RBP12.63□□□□□ -0.39
RTN4IP1-204ENST00000539449 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
RTN4IP1-204ENST00000539449 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
RTN4IP1-204ENST00000539449 SRPK2P78362 688 aaKnown RBP12.62□□□□□ -0.39
RTN4IP1-204ENST00000539449 PUS7Q96PZ0 661 aaKnown RBP12.62□□□□□ -0.39
RTN4IP1-204ENST00000539449 RGPD8O14715 1765 aaPredicted RBP12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 ADGRB2O60241 1585 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 ANP32CO43423 234 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 BAG6P46379 1132 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 CARD14Q9BXL6 1004 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 NALCNQ8IZF0 1738 aa12.61□□□□□ -0.39
RTN4IP1-204ENST00000539449 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
RTN4IP1-204ENST00000539449 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
RTN4IP1-204ENST00000539449 ADGRL3Q9HAR2 1447 aa12.6□□□□□ -0.39
RTN4IP1-204ENST00000539449 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
RTN4IP1-204ENST00000539449 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
RTN4IP1-204ENST00000539449 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
RTN4IP1-204ENST00000539449 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
RTN4IP1-204ENST00000539449 PRKRIP1Q9H875 184 aaPredicted RBP12.58□□□□□ -0.4
RTN4IP1-204ENST00000539449 CD163L1Q9NR16 1453 aa12.58□□□□□ -0.4
RTN4IP1-204ENST00000539449 NUTM2FA1L443 756 aa12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 UNC5CLQ8IV45 518 aa12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 NUDT16Q96DE0 195 aaKnown RBP12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 FMN2Q9NZ56 1722 aa12.57□□□□□ -0.4
RTN4IP1-204ENST00000539449 ORAI2Q96SN7 254 aa12.56□□□□□ -0.4
RTN4IP1-204ENST00000539449 CABP1Q9NZU7 370 aa12.56□□□□□ -0.4
RTN4IP1-204ENST00000539449 ATP7BP35670 1465 aa12.56□□□□□ -0.4
RTN4IP1-204ENST00000539449 EN1Q05925 392 aaPredicted RBP12.55□□□□□ -0.4
RTN4IP1-204ENST00000539449 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
RTN4IP1-204ENST00000539449 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
RTN4IP1-204ENST00000539449 KRT27Q7Z3Y8 459 aa12.55□□□□□ -0.4
RTN4IP1-204ENST00000539449 AKAP12Q02952 1782 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 SLIT2O94813 1529 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 ANKRD36BQ8N2N9 1353 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 RGPD1P0DJD0 1748 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
RTN4IP1-204ENST00000539449 KNSTRNQ9Y448 316 aa12.53□□□□□ -0.4
RTN4IP1-204ENST00000539449 ITSN1Q15811 1721 aa12.53□□□□□ -0.4
RTN4IP1-204ENST00000539449 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
RTN4IP1-204ENST00000539449 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
RTN4IP1-204ENST00000539449 CDC42BPGQ6DT37 1551 aa12.52□□□□□ -0.41
RTN4IP1-204ENST00000539449 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 NINLQ9Y2I6 1382 aa12.51□□□□□ -0.41
RTN4IP1-204ENST00000539449 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
RTN4IP1-204ENST00000539449 KIF20BQ96Q89 1820 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 CAMTA1Q9Y6Y1 1673 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 PXDNQ92626 1479 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 PLEKHG3A1L390 1219 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 RALBP1Q15311 655 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 TERF2IPQ9NYB0 399 aa12.49□□□□□ -0.41
RTN4IP1-204ENST00000539449 VPS72Q15906 364 aa12.48□□□□□ -0.41
RTN4IP1-204ENST00000539449 HDGFL2Q7Z4V5 671 aaPredicted RBP12.48□□□□□ -0.41
RTN4IP1-204ENST00000539449 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
RTN4IP1-204ENST00000539449 TNS1Q9HBL0 1735 aaKnown RBP12.48□□□□□ -0.41
RTN4IP1-204ENST00000539449 ANKRD26Q9UPS8 1709 aa12.48□□□□□ -0.41
RTN4IP1-204ENST00000539449 DISP2A7MBM2 1401 aa12.47□□□□□ -0.41
RTN4IP1-204ENST00000539449 ANKARQ7Z5J8 1434 aa12.47□□□□□ -0.41
RTN4IP1-204ENST00000539449 ACEP12821 1306 aa12.47□□□□□ -0.41
RTN4IP1-204ENST00000539449 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
RTN4IP1-204ENST00000539449 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
RTN4IP1-204ENST00000539449 MYBBP1AQ9BQG0 1328 aaKnown RBP12.46□□□□□ -0.41
RTN4IP1-204ENST00000539449 PLCH1Q4KWH8 1693 aa12.46□□□□□ -0.41
RTN4IP1-204ENST00000539449 EZH2Q15910 746 aaKnown RBP12.46□□□□□ -0.41
RTN4IP1-204ENST00000539449 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
RTN4IP1-204ENST00000539449 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
RTN4IP1-204ENST00000539449 NWD2Q9ULI1 1742 aa12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 FYB1O15117 783 aa12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 PPP2R1AP30153 589 aa12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 XPCQ01831 940 aaPredicted RBP12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
RTN4IP1-204ENST00000539449 A0A0G2JS52 829 aa12.44□□□□□ -0.42
RTN4IP1-204ENST00000539449 MYT1Q01538 1121 aa12.44□□□□□ -0.42
RTN4IP1-204ENST00000539449 YTHDC1Q96MU7 727 aaKnown RBP12.44□□□□□ -0.42
RTN4IP1-204ENST00000539449 MRS2Q9HD23 443 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms