RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 TESK2Q96S53 571 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 USP47Q96K76 1375 aa12.69□□□□□ -0.38
LRTOMT-216ENST00000539271 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
LRTOMT-216ENST00000539271 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
LRTOMT-216ENST00000539271 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
LRTOMT-216ENST00000539271 CRYBG1Q9Y4K1 1723 aa12.67□□□□□ -0.38
LRTOMT-216ENST00000539271 BRD4O60885 1362 aaPredicted RBP12.67□□□□□ -0.38
LRTOMT-216ENST00000539271 AKAP12Q02952 1782 aa12.66□□□□□ -0.38
LRTOMT-216ENST00000539271 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
LRTOMT-216ENST00000539271 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
LRTOMT-216ENST00000539271 USP6P35125 1406 aa12.65□□□□□ -0.38
LRTOMT-216ENST00000539271 SLC24A1O60721 1099 aa12.65□□□□□ -0.38
LRTOMT-216ENST00000539271 SSH2Q76I76 1423 aa12.64□□□□□ -0.39
LRTOMT-216ENST00000539271 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
LRTOMT-216ENST00000539271 HAP1P54257 671 aaPredicted RBP12.64□□□□□ -0.39
LRTOMT-216ENST00000539271 CPSF1Q10570 1443 aaKnown RBP12.63□□□□□ -0.39
LRTOMT-216ENST00000539271 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
LRTOMT-216ENST00000539271 USP21Q9UK80 565 aa12.63□□□□□ -0.39
LRTOMT-216ENST00000539271 SLIT2O94813 1529 aa12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 PHRF1Q9P1Y6 1649 aaKnown RBP12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 QTRT2Q9H974 415 aaKnown RBP12.62□□□□□ -0.39
LRTOMT-216ENST00000539271 NRKQ7Z2Y5 1582 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 CD163L1Q9NR16 1453 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 NWD2Q9ULI1 1742 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 ATRNO75882 1429 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 USP19O94966 1318 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 PIK3C2AO00443 1686 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 PLCH1Q4KWH8 1693 aa12.61□□□□□ -0.39
LRTOMT-216ENST00000539271 KTN1Q86UP2 1357 aaKnown RBP12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 RXRBP28702 533 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 TMF1P82094 1093 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 TRPC5Q9UL62 973 aaPredicted RBP12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
LRTOMT-216ENST00000539271 CDK12Q9NYV4 1490 aaPredicted RBP12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 COL14A1Q05707 1796 aaKnown RBP12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 RBM6P78332 1123 aaKnown RBP12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 NLRP13Q86W25 1043 aa12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
LRTOMT-216ENST00000539271 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 NLRP6P59044 892 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 HDGFL2Q7Z4V5 671 aaPredicted RBP12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 SLIT3O75094 1523 aa12.57□□□□□ -0.4
LRTOMT-216ENST00000539271 KIAA0232Q92628 1395 aa12.56□□□□□ -0.4
LRTOMT-216ENST00000539271 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
LRTOMT-216ENST00000539271 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
LRTOMT-216ENST00000539271 PRDM11Q9NQV5 511 aa12.56□□□□□ -0.4
LRTOMT-216ENST00000539271 CPDO75976 1380 aa12.56□□□□□ -0.4
LRTOMT-216ENST00000539271 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
LRTOMT-216ENST00000539271 GCP02774 474 aa12.55□□□□□ -0.4
LRTOMT-216ENST00000539271 HSPA5P11021 654 aaKnown RBP12.55□□□□□ -0.4
LRTOMT-216ENST00000539271 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
LRTOMT-216ENST00000539271 RGS12O14924 1447 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 VPS72Q15906 364 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 GJD4Q96KN9 370 aaPredicted RBP12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 BTG4Q9NY30 223 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 GLI3P10071 1580 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 MYOM1P52179 1685 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 ANKRD36BQ8N2N9 1353 aa12.54□□□□□ -0.4
LRTOMT-216ENST00000539271 CHRNA2Q15822 529 aa12.53□□□□□ -0.4
LRTOMT-216ENST00000539271 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
LRTOMT-216ENST00000539271 NME9Q86XW9 330 aa12.52□□□□□ -0.41
LRTOMT-216ENST00000539271 ZRANB1Q9UGI0 708 aa12.52□□□□□ -0.41
LRTOMT-216ENST00000539271 NFAT5O94916 1531 aa12.52□□□□□ -0.41
LRTOMT-216ENST00000539271 KCNH5Q8NCM2 988 aa12.51□□□□□ -0.41
LRTOMT-216ENST00000539271 CAMTA1Q9Y6Y1 1673 aa12.51□□□□□ -0.41
LRTOMT-216ENST00000539271 COL18A1P39060 1754 aa12.51□□□□□ -0.41
LRTOMT-216ENST00000539271 OVOS2A0A0J9YW53 1432 aa12.5□□□□□ -0.41
LRTOMT-216ENST00000539271 OVOS2Q6IE36 1432 aa12.5□□□□□ -0.41
LRTOMT-216ENST00000539271 AATKQ6ZMQ8 1374 aa12.49□□□□□ -0.41
LRTOMT-216ENST00000539271 SPATA31A5Q5VU36 1347 aa12.49□□□□□ -0.41
LRTOMT-216ENST00000539271 SPATA31A7Q8IWB4 1347 aa12.49□□□□□ -0.41
LRTOMT-216ENST00000539271 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
LRTOMT-216ENST00000539271 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
LRTOMT-216ENST00000539271 ONECUT3O60422 494 aaPredicted RBP12.48□□□□□ -0.41
LRTOMT-216ENST00000539271 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 SOX12O15370 315 aa12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 ABCC6O95255 1503 aa12.47□□□□□ -0.41
LRTOMT-216ENST00000539271 SRCAPQ6ZRS2 3230 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms