RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 RAPGEF3O95398 923 aa9□□□□□ -0.97
PROM1-219ENST00000539194 BRPF1P55201 1214 aaPredicted RBP9□□□□□ -0.97
PROM1-219ENST00000539194 ANTXR1Q9H6X2 564 aa9□□□□□ -0.97
PROM1-219ENST00000539194 PIK3R4Q99570 1358 aa9□□□□□ -0.97
PROM1-219ENST00000539194 MORC1Q86VD1 984 aa9□□□□□ -0.97
PROM1-219ENST00000539194 PANK1Q8TE04 598 aa9□□□□□ -0.97
PROM1-219ENST00000539194 FYB1O15117 783 aa8.99□□□□□ -0.97
PROM1-219ENST00000539194 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
PROM1-219ENST00000539194 PEAK1Q9H792 1746 aa8.99□□□□□ -0.97
PROM1-219ENST00000539194 PPM1GO15355 546 aaPredicted RBP8.98□□□□□ -0.97
PROM1-219ENST00000539194 OSCARQ8IYS5 282 aa8.98□□□□□ -0.97
PROM1-219ENST00000539194 MAPK8IP3Q9UPT6 1336 aa8.98□□□□□ -0.97
PROM1-219ENST00000539194 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.98□□□□□ -0.97
PROM1-219ENST00000539194 FMN2Q9NZ56 1722 aa8.97□□□□□ -0.97
PROM1-219ENST00000539194 CDK12Q9NYV4 1490 aaPredicted RBP8.97□□□□□ -0.97
PROM1-219ENST00000539194 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
PROM1-219ENST00000539194 NFKBIBQ15653 356 aa8.97□□□□□ -0.97
PROM1-219ENST00000539194 GGT6Q6P531 493 aa8.97□□□□□ -0.97
PROM1-219ENST00000539194 COG6Q9Y2V7 657 aa8.97□□□□□ -0.97
PROM1-219ENST00000539194 PTCH1Q13635 1447 aa8.96□□□□□ -0.97
PROM1-219ENST00000539194 CABP2Q9NPB3 220 aa8.96□□□□□ -0.97
PROM1-219ENST00000539194 HDAC1Q13547 482 aaPredicted RBP8.96□□□□□ -0.98
PROM1-219ENST00000539194 MVPQ14764 893 aaKnown RBP8.96□□□□□ -0.98
PROM1-219ENST00000539194 NPM2Q86SE8 214 aaKnown RBP8.96□□□□□ -0.98
PROM1-219ENST00000539194 LRRC37A3O60309 1634 aa8.96□□□□□ -0.98
PROM1-219ENST00000539194 TMPOP42166 694 aaKnown RBP8.95□□□□□ -0.98
PROM1-219ENST00000539194 TBC1D32Q96NH3 1257 aa8.95□□□□□ -0.98
PROM1-219ENST00000539194 NEFMP07197 916 aa8.95□□□□□ -0.98
PROM1-219ENST00000539194 RRP7AQ9Y3A4 280 aaKnown RBP8.95□□□□□ -0.98
PROM1-219ENST00000539194 AATKQ6ZMQ8 1374 aa8.95□□□□□ -0.98
PROM1-219ENST00000539194 TSPOAP1O95153 1857 aa8.95□□□□□ -0.98
PROM1-219ENST00000539194 LAS1LQ9Y4W2 734 aaKnown RBP8.94□□□□□ -0.98
PROM1-219ENST00000539194 DDIT3P35638 169 aa8.94□□□□□ -0.98
PROM1-219ENST00000539194 PMFBP1Q8TBY8 1022 aa8.94□□□□□ -0.98
PROM1-219ENST00000539194 PPP6R1Q9UPN7 881 aa8.94□□□□□ -0.98
PROM1-219ENST00000539194 SLC4A3P48751 1232 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 SMC5Q8IY18 1101 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 ZNF853P0CG23 659 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 TRIM27P14373 513 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 ZBTB40Q9NUA8 1239 aa8.93□□□□□ -0.98
PROM1-219ENST00000539194 EDC4Q6P2E9 1401 aaKnown RBP8.93□□□□□ -0.98
PROM1-219ENST00000539194 MYH16Q9H6N6 1097 aa8.92□□□□□ -0.98
PROM1-219ENST00000539194 PDZRN3Q9UPQ7 1066 aa8.92□□□□□ -0.98
PROM1-219ENST00000539194 RGS12O14924 1447 aa8.92□□□□□ -0.98
PROM1-219ENST00000539194 SSH2Q76I76 1423 aa8.92□□□□□ -0.98
PROM1-219ENST00000539194 SSH1Q8WYL5 1049 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 PRAM1Q96QH2 718 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
PROM1-219ENST00000539194 RIMS2Q9UQ26 1411 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 RGS3P49796 1198 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 GSE1Q14687 1217 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
PROM1-219ENST00000539194 SIRT1Q96EB6 747 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 POLKQ9UBT6 870 aa8.91□□□□□ -0.98
PROM1-219ENST00000539194 ALDH1L2Q3SY69 923 aa8.9□□□□□ -0.98
PROM1-219ENST00000539194 NUTM2DQ5VT03 806 aaPredicted RBP8.9□□□□□ -0.98
PROM1-219ENST00000539194 TSR2Q969E8 191 aaKnown RBP8.9□□□□□ -0.98
PROM1-219ENST00000539194 CFAP53Q96M91 514 aa8.9□□□□□ -0.98
PROM1-219ENST00000539194 TNNT2P45379 298 aaPredicted RBP8.9□□□□□ -0.98
PROM1-219ENST00000539194 GGNBP2Q9H3C7 697 aa8.9□□□□□ -0.99
PROM1-219ENST00000539194 METP08581 1390 aa8.9□□□□□ -0.99
PROM1-219ENST00000539194 OVOS2A0A0J9YW53 1432 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 FCHSD2O94868 740 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 EXOSC9Q06265 439 aaKnown RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 ZKSCAN2Q63HK3 967 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 OVOS2Q6IE36 1432 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 ATF7IPQ6VMQ6 1270 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 RGPD8O14715 1765 aaPredicted RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 XRN1Q8IZH2 1706 aaKnown RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 NPM1P06748 294 aaKnown RBP eCLIP8.89□□□□□ -0.99
PROM1-219ENST00000539194 IL13P35225 146 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 DZIP1LQ8IYY4 767 aaKnown RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 FAM208AQ9UK61 1670 aaKnown RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 ADAMTS13Q76LX8 1427 aa8.89□□□□□ -0.99
PROM1-219ENST00000539194 FRAT2O75474 233 aaPredicted RBP8.89□□□□□ -0.99
PROM1-219ENST00000539194 CHGAP10645 457 aaKnown RBP8.88□□□□□ -0.99
PROM1-219ENST00000539194 ABCC4O15439 1325 aa8.88□□□□□ -0.99
PROM1-219ENST00000539194 U2AF1L5P0DN76 240 aaPredicted RBP8.88□□□□□ -0.99
PROM1-219ENST00000539194 U2AF1Q01081 240 aaKnown RBP eCLIP8.88□□□□□ -0.99
PROM1-219ENST00000539194 BCL2L13Q9BXK5 485 aa8.88□□□□□ -0.99
PROM1-219ENST00000539194 RTL5Q5HYW3 569 aaPredicted RBP8.88□□□□□ -0.99
PROM1-219ENST00000539194 FRAT1Q92837 279 aaPredicted RBP8.88□□□□□ -0.99
PROM1-219ENST00000539194 TBC1D2Q9BYX2 928 aa8.88□□□□□ -0.99
PROM1-219ENST00000539194 PIK3C2AO00443 1686 aa8.88□□□□□ -0.99
PROM1-219ENST00000539194 IL27Q8NEV9 243 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 ZNF428Q96B54 188 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 NUCB1Q02818 461 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 ARHGAP45Q92619 1136 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 KIF2CQ99661 725 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 TERF2IPQ9NYB0 399 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 KIF24Q5T7B8 1368 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 ZBTB7BO15156 539 aaPredicted RBP8.87□□□□□ -0.99
PROM1-219ENST00000539194 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 RWDD1Q9H446 243 aaPredicted RBP8.87□□□□□ -0.99
PROM1-219ENST00000539194 NOB1Q9ULX3 412 aaKnown RBP8.87□□□□□ -0.99
PROM1-219ENST00000539194 NWD1Q149M9 1564 aa8.87□□□□□ -0.99
PROM1-219ENST00000539194 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
PROM1-219ENST00000539194 PHACTR3Q96KR7 559 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms