RNA–Protein interactions for RNA: ENST00000539067.5

CRX-202, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRX, Length 2,275 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-202ENST00000539067 CGNL1Q0VF96 1302 aa16.36■□□□□ 0.21
CRX-202ENST00000539067 FOXO3O43524 673 aa16.36■□□□□ 0.21
CRX-202ENST00000539067 A0A1W2PP64 1363 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 NSD2O96028 1365 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 INSRP06213 1382 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 CABP1Q9NZU7 370 aa16.35■□□□□ 0.21
CRX-202ENST00000539067 BCL11AQ9H165 835 aa16.34■□□□□ 0.21
CRX-202ENST00000539067 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
CRX-202ENST00000539067 CCDC61Q9Y6R9 512 aa16.34■□□□□ 0.21
CRX-202ENST00000539067 CD163L1Q9NR16 1453 aa16.33■□□□□ 0.2
CRX-202ENST00000539067 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
CRX-202ENST00000539067 ANKARQ7Z5J8 1434 aa16.32■□□□□ 0.2
CRX-202ENST00000539067 HSPA1LP34931 641 aa16.32■□□□□ 0.2
CRX-202ENST00000539067 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
CRX-202ENST00000539067 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
CRX-202ENST00000539067 BLMP54132 1417 aaPredicted RBP16.31■□□□□ 0.2
CRX-202ENST00000539067 NGDNQ8NEJ9 315 aaKnown RBP16.31■□□□□ 0.2
CRX-202ENST00000539067 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
CRX-202ENST00000539067 ACEP12821 1306 aa16.3■□□□□ 0.2
CRX-202ENST00000539067 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
CRX-202ENST00000539067 KIF20BQ96Q89 1820 aa16.29■□□□□ 0.2
CRX-202ENST00000539067 WDR43Q15061 677 aaKnown RBP eCLIP16.29■□□□□ 0.2
CRX-202ENST00000539067 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
CRX-202ENST00000539067 PSME1Q06323 249 aa16.28■□□□□ 0.2
CRX-202ENST00000539067 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
CRX-202ENST00000539067 POLR3AO14802 1390 aaPredicted RBP16.27■□□□□ 0.19
CRX-202ENST00000539067 PLEKHG3A1L390 1219 aa16.26■□□□□ 0.19
CRX-202ENST00000539067 KRT28Q7Z3Y7 464 aa16.26■□□□□ 0.19
CRX-202ENST00000539067 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
CRX-202ENST00000539067 PHLPP1O60346 1717 aa16.25■□□□□ 0.19
CRX-202ENST00000539067 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CRX-202ENST00000539067 NPHP3Q7Z494 1330 aa16.25■□□□□ 0.19
CRX-202ENST00000539067 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
CRX-202ENST00000539067 AKAP12Q02952 1782 aa16.24■□□□□ 0.19
CRX-202ENST00000539067 MON2Q7Z3U7 1717 aa16.24■□□□□ 0.19
CRX-202ENST00000539067 CPSF1Q10570 1443 aaKnown RBP16.24■□□□□ 0.19
CRX-202ENST00000539067 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
CRX-202ENST00000539067 KIF1AQ12756 1690 aa16.24■□□□□ 0.19
CRX-202ENST00000539067 ADAMTS8Q9UP79 889 aa16.24■□□□□ 0.19
CRX-202ENST00000539067 SMG6Q86US8 1419 aaKnown RBP16.23■□□□□ 0.19
CRX-202ENST00000539067 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
CRX-202ENST00000539067 NEFLP07196 543 aa16.22■□□□□ 0.19
CRX-202ENST00000539067 NUTM2GQ5VZR2 741 aa16.22■□□□□ 0.19
CRX-202ENST00000539067 PXDNQ92626 1479 aa16.22■□□□□ 0.19
CRX-202ENST00000539067 SOS2Q07890 1332 aaPredicted RBP16.22■□□□□ 0.19
CRX-202ENST00000539067 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
CRX-202ENST00000539067 AHDC1Q5TGY3 1603 aaPredicted RBP16.22■□□□□ 0.19
CRX-202ENST00000539067 FYB1O15117 783 aa16.21■□□□□ 0.19
CRX-202ENST00000539067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.21■□□□□ 0.19
CRX-202ENST00000539067 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
CRX-202ENST00000539067 COL16A1Q07092 1604 aaPredicted RBP16.21■□□□□ 0.19
CRX-202ENST00000539067 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
CRX-202ENST00000539067 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
CRX-202ENST00000539067 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
CRX-202ENST00000539067 NUDCQ9Y266 331 aa16.2■□□□□ 0.18
CRX-202ENST00000539067 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
CRX-202ENST00000539067 USP6P35125 1406 aa16.19■□□□□ 0.18
CRX-202ENST00000539067 MTHFSP49914 203 aa16.19■□□□□ 0.18
CRX-202ENST00000539067 LRRC59Q96AG4 307 aaKnown RBP16.18■□□□□ 0.18
CRX-202ENST00000539067 ZRANB1Q9UGI0 708 aa16.18■□□□□ 0.18
CRX-202ENST00000539067 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
CRX-202ENST00000539067 CABLES1Q8TDN4 633 aa16.17■□□□□ 0.18
CRX-202ENST00000539067 SPATA31A3Q5VYP0 1347 aa16.17■□□□□ 0.18
CRX-202ENST00000539067 ZNF692Q9BU19 519 aaPredicted RBP16.17■□□□□ 0.18
CRX-202ENST00000539067 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
CRX-202ENST00000539067 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
CRX-202ENST00000539067 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
CRX-202ENST00000539067 NME9Q86XW9 330 aa16.16■□□□□ 0.18
CRX-202ENST00000539067 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
CRX-202ENST00000539067 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
CRX-202ENST00000539067 NUTM2BA6NNL0 878 aaPredicted RBP16.15■□□□□ 0.18
CRX-202ENST00000539067 NUTM2EB1AL46 878 aaPredicted RBP16.15■□□□□ 0.18
CRX-202ENST00000539067 NUTM2AQ8IVF1 878 aaPredicted RBP16.15■□□□□ 0.18
CRX-202ENST00000539067 TNS3Q68CZ2 1445 aa16.15■□□□□ 0.18
CRX-202ENST00000539067 MSH5O43196 834 aa16.15■□□□□ 0.18
CRX-202ENST00000539067 SSH2Q76I76 1423 aa16.14■□□□□ 0.17
CRX-202ENST00000539067 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
CRX-202ENST00000539067 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
CRX-202ENST00000539067 IRX6P78412 446 aaPredicted RBP16.14■□□□□ 0.17
CRX-202ENST00000539067 SOX12O15370 315 aa16.13■□□□□ 0.17
CRX-202ENST00000539067 JCADQ9P266 1359 aa16.12■□□□□ 0.17
CRX-202ENST00000539067 NLRP6P59044 892 aa16.12■□□□□ 0.17
CRX-202ENST00000539067 CCDC146Q8IYE0 955 aa16.12■□□□□ 0.17
CRX-202ENST00000539067 COL3A1P02461 1466 aaPredicted RBP16.12■□□□□ 0.17
CRX-202ENST00000539067 ALS2Q96Q42 1657 aa16.11■□□□□ 0.17
CRX-202ENST00000539067 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
CRX-202ENST00000539067 ADAMTS2O95450 1211 aa16.1■□□□□ 0.17
CRX-202ENST00000539067 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
CRX-202ENST00000539067 COG3Q96JB2 828 aa16.1■□□□□ 0.17
CRX-202ENST00000539067 MAP2P11137 1827 aaKnown RBP16.09■□□□□ 0.17
CRX-202ENST00000539067 FBLN1P23142 703 aa16.09■□□□□ 0.17
CRX-202ENST00000539067 HAP1P54257 671 aaPredicted RBP16.08■□□□□ 0.16
CRX-202ENST00000539067 ARHGEF10O15013 1369 aa16.08■□□□□ 0.16
CRX-202ENST00000539067 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
CRX-202ENST00000539067 APAF1O14727 1248 aa16.07■□□□□ 0.16
CRX-202ENST00000539067 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
CRX-202ENST00000539067 TTC21AQ8NDW8 1320 aa16.07■□□□□ 0.16
CRX-202ENST00000539067 ZNF521Q96K83 1311 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms