RNA–Protein interactions for RNA: ENST00000539013.5

KNTC1-210, Transcript of kinetochore associated 1, humanhuman

TSL 5

Gene KNTC1, Length 615 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-210ENST00000539013 PRR20CP86479 221 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PRR20DP86480 221 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PRR20BP86481 221 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PRR20AP86496 221 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 MAP2K5Q13163 448 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PUS10Q3MIT2 529 aaKnown RBP8.31□□□□□ -1.08
KNTC1-210ENST00000539013 GRIPAP1Q4V328 841 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 EMID1Q96A84 441 aaPredicted RBP8.31□□□□□ -1.08
KNTC1-210ENST00000539013 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
KNTC1-210ENST00000539013 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
KNTC1-210ENST00000539013 EPRSP07814 1512 aaKnown RBP8.3□□□□□ -1.08
KNTC1-210ENST00000539013 FUT2Q10981 343 aa8.3□□□□□ -1.08
KNTC1-210ENST00000539013 PTPN23Q9H3S7 1636 aa8.29□□□□□ -1.08
KNTC1-210ENST00000539013 LCE2BO14633 110 aa8.29□□□□□ -1.08
KNTC1-210ENST00000539013 PPEF1O14829 653 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-210ENST00000539013 FMNL1O95466 1100 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-210ENST00000539013 MAGI1Q96QZ7 1491 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-210ENST00000539013 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
KNTC1-210ENST00000539013 LIAT1Q6ZQX7 453 aa8.28□□□□□ -1.08
KNTC1-210ENST00000539013 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
KNTC1-210ENST00000539013 KIAA0556O60303 1618 aa8.28□□□□□ -1.08
KNTC1-210ENST00000539013 NAIPQ13075 1403 aa8.28□□□□□ -1.08
KNTC1-210ENST00000539013 GRIN2AQ12879 1464 aa8.27□□□□□ -1.09
KNTC1-210ENST00000539013 IRF6O14896 467 aa8.27□□□□□ -1.09
KNTC1-210ENST00000539013 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
KNTC1-210ENST00000539013 TRIM67Q6ZTA4 783 aa8.27□□□□□ -1.09
KNTC1-210ENST00000539013 MAGI3Q5TCQ9 1506 aa8.27□□□□□ -1.09
KNTC1-210ENST00000539013 EIF4G3O43432 1585 aaKnown RBP8.27□□□□□ -1.09
KNTC1-210ENST00000539013 ZNF608Q9ULD9 1512 aaPredicted RBP8.26□□□□□ -1.09
KNTC1-210ENST00000539013 DGAT1O75907 488 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 RPIAP49247 311 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 NLRP7Q8WX94 980 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 SLC27A5Q9Y2P5 690 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 PTPRKQ15262 1439 aa8.26□□□□□ -1.09
KNTC1-210ENST00000539013 DISP1Q96F81 1524 aa8.25□□□□□ -1.09
KNTC1-210ENST00000539013 GCC2Q8IWJ2 1684 aa8.25□□□□□ -1.09
KNTC1-210ENST00000539013 CD46P15529 392 aa8.25□□□□□ -1.09
KNTC1-210ENST00000539013 SYNJ2O15056 1496 aa8.25□□□□□ -1.09
KNTC1-210ENST00000539013 ERCC6Q03468 1493 aa8.25□□□□□ -1.09
KNTC1-210ENST00000539013 PPP1R15AO75807 674 aaPredicted RBP8.24□□□□□ -1.09
KNTC1-210ENST00000539013 Q3C1V9 767 aa8.24□□□□□ -1.09
KNTC1-210ENST00000539013 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
KNTC1-210ENST00000539013 PLA2G2CQ5R387 149 aa8.24□□□□□ -1.09
KNTC1-210ENST00000539013 BRICD5Q6PL45 260 aa8.24□□□□□ -1.09
KNTC1-210ENST00000539013 KRI1Q8N9T8 703 aaKnown RBP8.24□□□□□ -1.09
KNTC1-210ENST00000539013 CDK11AQ9UQ88 783 aaPredicted RBP8.24□□□□□ -1.09
KNTC1-210ENST00000539013 RAPGEF6Q8TEU7 1601 aa8.23□□□□□ -1.09
KNTC1-210ENST00000539013 GDF9O60383 454 aa8.23□□□□□ -1.09
KNTC1-210ENST00000539013 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
KNTC1-210ENST00000539013 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
KNTC1-210ENST00000539013 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
KNTC1-210ENST00000539013 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
KNTC1-210ENST00000539013 USP46P62068 366 aa8.22□□□□□ -1.09
KNTC1-210ENST00000539013 SIN3AQ96ST3 1273 aa8.22□□□□□ -1.09
KNTC1-210ENST00000539013 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
KNTC1-210ENST00000539013 NUP160Q12769 1436 aa8.21□□□□□ -1.09
KNTC1-210ENST00000539013 NUP153P49790 1475 aaKnown RBP8.21□□□□□ -1.09
KNTC1-210ENST00000539013 CD2BP2O95400 341 aaKnown RBP8.21□□□□□ -1.1
KNTC1-210ENST00000539013 FCF1Q9Y324 198 aaKnown RBP8.21□□□□□ -1.1
KNTC1-210ENST00000539013 CARMIL2Q6F5E8 1435 aa8.2□□□□□ -1.1
KNTC1-210ENST00000539013 KDM4AO75164 1064 aa8.2□□□□□ -1.1
KNTC1-210ENST00000539013 YTHDC1Q96MU7 727 aaKnown RBP8.2□□□□□ -1.1
KNTC1-210ENST00000539013 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
KNTC1-210ENST00000539013 CLCN1P35523 988 aa8.19□□□□□ -1.1
KNTC1-210ENST00000539013 MDM2Q00987 491 aaPredicted RBP8.19□□□□□ -1.1
KNTC1-210ENST00000539013 ZC3H15Q8WU90 426 aaKnown RBP8.19□□□□□ -1.1
KNTC1-210ENST00000539013 CCDC102AQ96A19 550 aa8.19□□□□□ -1.1
KNTC1-210ENST00000539013 GPCPD1Q9NPB8 672 aa8.19□□□□□ -1.1
KNTC1-210ENST00000539013 TROQ12816 1431 aaPredicted RBP8.19□□□□□ -1.1
KNTC1-210ENST00000539013 CEP170Q5SW79 1584 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 ADCY10Q96PN6 1610 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 ITSN2Q9NZM3 1697 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 ZBTB24O43167 697 aaPredicted RBP8.18□□□□□ -1.1
KNTC1-210ENST00000539013 MYT1Q01538 1121 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 RNF19BQ6ZMZ0 732 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 CHMP7Q8WUX9 453 aaPredicted RBP8.18□□□□□ -1.1
KNTC1-210ENST00000539013 DAPK1P53355 1430 aa8.18□□□□□ -1.1
KNTC1-210ENST00000539013 MMP16P51512 607 aa8.17□□□□□ -1.1
KNTC1-210ENST00000539013 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
KNTC1-210ENST00000539013 FAM187AA6NFU0 413 aa8.16□□□□□ -1.1
KNTC1-210ENST00000539013 TNFRSF10AO00220 468 aa8.16□□□□□ -1.1
KNTC1-210ENST00000539013 USB1Q9BQ65 265 aaKnown RBP8.16□□□□□ -1.1
KNTC1-210ENST00000539013 FAM217BQ9NTX9 383 aaPredicted RBP8.16□□□□□ -1.1
KNTC1-210ENST00000539013 ADGRL2O95490 1459 aa8.15□□□□□ -1.1
KNTC1-210ENST00000539013 ABCC5O15440 1437 aa8.15□□□□□ -1.1
KNTC1-210ENST00000539013 CCER2I3L3R5 266 aa8.15□□□□□ -1.1
KNTC1-210ENST00000539013 PRDM9Q9NQV7 894 aa8.15□□□□□ -1.1
KNTC1-210ENST00000539013 KDM5BQ9UGL1 1544 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 HOXA2O43364 376 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 ZMYND10O75800 440 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 FOXC1Q12948 553 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 BARGINQ6ZT62 677 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 RRP7BPQ9NSQ0 103 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 ABCA8O94911 1581 aa8.14□□□□□ -1.11
KNTC1-210ENST00000539013 DENND4BO75064 1496 aaPredicted RBP8.13□□□□□ -1.11
KNTC1-210ENST00000539013 DXOO77932 396 aaKnown RBP8.13□□□□□ -1.11
KNTC1-210ENST00000539013 TOR4AQ9NXH8 423 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms