RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 U2AF1Q01081 240 aaKnown RBP eCLIP19.47■□□□□ 0.71
ATL3-203ENST00000538786 ZNF142P52746 1687 aaPredicted RBP19.47■□□□□ 0.71
ATL3-203ENST00000538786 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
ATL3-203ENST00000538786 MON2Q7Z3U7 1717 aa19.46■□□□□ 0.71
ATL3-203ENST00000538786 E9PSI1 815 aa19.46■□□□□ 0.71
ATL3-203ENST00000538786 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
ATL3-203ENST00000538786 XRN1Q8IZH2 1706 aaKnown RBP19.45■□□□□ 0.7
ATL3-203ENST00000538786 PLEKHG3A1L390 1219 aa19.45■□□□□ 0.7
ATL3-203ENST00000538786 ANKLE2Q86XL3 938 aa19.45■□□□□ 0.7
ATL3-203ENST00000538786 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
ATL3-203ENST00000538786 TOPAZ1Q8N9V7 1692 aa19.45■□□□□ 0.7
ATL3-203ENST00000538786 AKAP12Q02952 1782 aa19.44■□□□□ 0.7
ATL3-203ENST00000538786 NME9Q86XW9 330 aa19.44■□□□□ 0.7
ATL3-203ENST00000538786 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
ATL3-203ENST00000538786 ITSN1Q15811 1721 aa19.44■□□□□ 0.7
ATL3-203ENST00000538786 B4GALNT3Q6L9W6 998 aa19.43■□□□□ 0.7
ATL3-203ENST00000538786 DIAPH1O60610 1272 aaKnown RBP19.43■□□□□ 0.7
ATL3-203ENST00000538786 CCDC27Q2M243 656 aa19.43■□□□□ 0.7
ATL3-203ENST00000538786 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
ATL3-203ENST00000538786 POLKQ9UBT6 870 aa19.43■□□□□ 0.7
ATL3-203ENST00000538786 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
ATL3-203ENST00000538786 NKTRP30414 1462 aaKnown RBP19.41■□□□□ 0.7
ATL3-203ENST00000538786 U2SURPO15042 1029 aaKnown RBP19.41■□□□□ 0.7
ATL3-203ENST00000538786 COG3Q96JB2 828 aa19.41■□□□□ 0.7
ATL3-203ENST00000538786 ACEP12821 1306 aa19.41■□□□□ 0.7
ATL3-203ENST00000538786 KCNA6P17658 529 aa19.4■□□□□ 0.7
ATL3-203ENST00000538786 TSHZ2Q9NRE2 1034 aa19.4■□□□□ 0.7
ATL3-203ENST00000538786 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
ATL3-203ENST00000538786 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
ATL3-203ENST00000538786 WDR63Q8IWG1 891 aa19.39■□□□□ 0.7
ATL3-203ENST00000538786 PLEKHF1Q96S99 279 aa19.39■□□□□ 0.7
ATL3-203ENST00000538786 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
ATL3-203ENST00000538786 NRKQ7Z2Y5 1582 aa19.38■□□□□ 0.69
ATL3-203ENST00000538786 TTC21BQ7Z4L5 1316 aa19.38■□□□□ 0.69
ATL3-203ENST00000538786 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
ATL3-203ENST00000538786 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
ATL3-203ENST00000538786 ZRANB1Q9UGI0 708 aa19.38■□□□□ 0.69
ATL3-203ENST00000538786 USP6P35125 1406 aa19.38■□□□□ 0.69
ATL3-203ENST00000538786 CCDC136Q96JN2 1154 aa19.37■□□□□ 0.69
ATL3-203ENST00000538786 CDK12Q9NYV4 1490 aaPredicted RBP19.36■□□□□ 0.69
ATL3-203ENST00000538786 PPM1GO15355 546 aaPredicted RBP19.36■□□□□ 0.69
ATL3-203ENST00000538786 FBLN1P23142 703 aa19.36■□□□□ 0.69
ATL3-203ENST00000538786 EXOC6Q8TAG9 804 aa19.36■□□□□ 0.69
ATL3-203ENST00000538786 SETD1BQ9UPS6 1966 aaKnown RBP19.36■□□□□ 0.69
ATL3-203ENST00000538786 ANKARQ7Z5J8 1434 aa19.35■□□□□ 0.69
ATL3-203ENST00000538786 PLIN1O60240 522 aa19.35■□□□□ 0.69
ATL3-203ENST00000538786 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
ATL3-203ENST00000538786 MAPK8IP3Q9UPT6 1336 aa19.34■□□□□ 0.69
ATL3-203ENST00000538786 SSH2Q76I76 1423 aa19.34■□□□□ 0.69
ATL3-203ENST00000538786 FCHSD2O94868 740 aa19.34■□□□□ 0.69
ATL3-203ENST00000538786 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.33■□□□□ 0.68
ATL3-203ENST00000538786 OVOS2A0A0J9YW53 1432 aa19.33■□□□□ 0.68
ATL3-203ENST00000538786 OVOS2Q6IE36 1432 aa19.33■□□□□ 0.68
ATL3-203ENST00000538786 TMPOP42166 694 aaKnown RBP19.32■□□□□ 0.68
ATL3-203ENST00000538786 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
ATL3-203ENST00000538786 MAP2P11137 1827 aaKnown RBP19.31■□□□□ 0.68
ATL3-203ENST00000538786 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
ATL3-203ENST00000538786 CHD2O14647 1828 aaKnown RBP19.31■□□□□ 0.68
ATL3-203ENST00000538786 IL13P35225 146 aa19.3■□□□□ 0.68
ATL3-203ENST00000538786 PMFBP1Q8TBY8 1022 aa19.3■□□□□ 0.68
ATL3-203ENST00000538786 NGDNQ8NEJ9 315 aaKnown RBP19.29■□□□□ 0.68
ATL3-203ENST00000538786 RSPH6AQ9H0K4 717 aa19.29■□□□□ 0.68
ATL3-203ENST00000538786 RRS1Q15050 365 aaKnown RBP19.29■□□□□ 0.68
ATL3-203ENST00000538786 MYH16Q9H6N6 1097 aa19.29■□□□□ 0.68
ATL3-203ENST00000538786 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
ATL3-203ENST00000538786 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
ATL3-203ENST00000538786 USP31Q70CQ4 1352 aa19.28■□□□□ 0.68
ATL3-203ENST00000538786 FMN2Q9NZ56 1722 aa19.28■□□□□ 0.68
ATL3-203ENST00000538786 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.68
ATL3-203ENST00000538786 NEFMP07197 916 aa19.27■□□□□ 0.67
ATL3-203ENST00000538786 C20orf194Q5TEA3 1177 aa19.27■□□□□ 0.67
ATL3-203ENST00000538786 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
ATL3-203ENST00000538786 RIPK4P57078 832 aa19.25■□□□□ 0.67
ATL3-203ENST00000538786 IL16Q14005 1332 aa19.25■□□□□ 0.67
ATL3-203ENST00000538786 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
ATL3-203ENST00000538786 BCAR3O75815 825 aa19.25■□□□□ 0.67
ATL3-203ENST00000538786 RGPD8O14715 1765 aaPredicted RBP19.24■□□□□ 0.67
ATL3-203ENST00000538786 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
ATL3-203ENST00000538786 HMOX1P09601 288 aa19.23■□□□□ 0.67
ATL3-203ENST00000538786 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
ATL3-203ENST00000538786 FANCIQ9NVI1 1328 aa19.2■□□□□ 0.66
ATL3-203ENST00000538786 RARSP54136 660 aaKnown RBP19.2■□□□□ 0.66
ATL3-203ENST00000538786 NFE2L2Q16236 605 aa19.2■□□□□ 0.66
ATL3-203ENST00000538786 PHACTR3Q96KR7 559 aa19.2■□□□□ 0.66
ATL3-203ENST00000538786 MYT1Q01538 1121 aa19.19■□□□□ 0.66
ATL3-203ENST00000538786 NWD1Q149M9 1564 aa19.19■□□□□ 0.66
ATL3-203ENST00000538786 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
ATL3-203ENST00000538786 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
ATL3-203ENST00000538786 PDE3AQ14432 1141 aa19.18■□□□□ 0.66
ATL3-203ENST00000538786 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
ATL3-203ENST00000538786 RBM33Q96EV2 1170 aaKnown RBP19.17■□□□□ 0.66
ATL3-203ENST00000538786 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
ATL3-203ENST00000538786 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
ATL3-203ENST00000538786 MAP3K19Q56UN5 1328 aa19.16■□□□□ 0.66
ATL3-203ENST00000538786 SBNO1A3KN83 1393 aa19.16■□□□□ 0.66
ATL3-203ENST00000538786 NLRP6P59044 892 aa19.15■□□□□ 0.66
ATL3-203ENST00000538786 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
ATL3-203ENST00000538786 HSP90AB2PQ58FF8 381 aa19.15■□□□□ 0.66
ATL3-203ENST00000538786 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
ATL3-203ENST00000538786 CANXP27824 592 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms