RNA–Protein interactions for RNA: ENST00000538379.5

KDM2B-208, Transcript of lysine demethylase 2B, human

TSL 4

Gene KDM2B, Length 574 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM2B-208	ENST00000538379	SCAF1	Q9H7N4	1312 aa	Known RBP	11.35	□□□□□ -0.59
KDM2B-208	ENST00000538379	PSME1	Q06323	249 aa		11.34	□□□□□ -0.59
KDM2B-208	ENST00000538379	MON2	Q7Z3U7	1717 aa		11.34	□□□□□ -0.59
KDM2B-208	ENST00000538379	XIRP1	Q702N8	1843 aa	Known RBP	11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	PPP2R1A	P30153	589 aa		11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	COG3	Q96JB2	828 aa		11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	ORAI2	Q96SN7	254 aa		11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	SLAIN2	Q9P270	581 aa		11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	LTBP4	Q8N2S1	1624 aa		11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	RGPD8	O14715	1765 aa	Predicted RBP	11.33	□□□□□ -0.6
KDM2B-208	ENST00000538379	USP31	Q70CQ4	1352 aa		11.32	□□□□□ -0.6
KDM2B-208	ENST00000538379	GGNBP2	Q9H3C7	697 aa		11.32	□□□□□ -0.6
KDM2B-208	ENST00000538379	MRS2	Q9HD23	443 aa		11.32	□□□□□ -0.6
KDM2B-208	ENST00000538379	KIF1A	Q12756	1690 aa		11.32	□□□□□ -0.6
KDM2B-208	ENST00000538379	CNGB1	Q14028	1251 aa	Predicted RBP	11.31	□□□□□ -0.6
KDM2B-208	ENST00000538379	NPHP3	Q7Z494	1330 aa		11.31	□□□□□ -0.6
KDM2B-208	ENST00000538379	AATK	Q6ZMQ8	1374 aa		11.3	□□□□□ -0.6
KDM2B-208	ENST00000538379	FOXO3	O43524	673 aa		11.3	□□□□□ -0.6
KDM2B-208	ENST00000538379	KRT28	Q7Z3Y7	464 aa		11.3	□□□□□ -0.6
KDM2B-208	ENST00000538379	ANKRD26	Q9UPS8	1709 aa		11.29	□□□□□ -0.6
KDM2B-208	ENST00000538379	NME9	Q86XW9	330 aa		11.29	□□□□□ -0.6
KDM2B-208	ENST00000538379	SBNO1	A3KN83	1393 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	NRK	Q7Z2Y5	1582 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	KIF20B	Q96Q89	1820 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	IQSEC2	Q5JU85	1478 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	BRINP3	Q76B58	766 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	ABTB2	Q8N961	1025 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	PNISR	Q8TF01	805 aa	Known RBP	11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	CFAP53	Q96M91	514 aa		11.28	□□□□□ -0.6
KDM2B-208	ENST00000538379	TOM1	O60784	492 aa		11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	PAK3	O75914	559 aa	Predicted RBP	11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	MTHFS	P49914	203 aa		11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	NLRP6	P59044	892 aa		11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	CCDC184	Q52MB2	194 aa		11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	INSR	P06213	1382 aa		11.27	□□□□□ -0.61
KDM2B-208	ENST00000538379	KCNH5	Q8NCM2	988 aa		11.26	□□□□□ -0.61
KDM2B-208	ENST00000538379	OVOS2	A0A0J9YW53	1432 aa		11.26	□□□□□ -0.61
KDM2B-208	ENST00000538379	OVOS2	Q6IE36	1432 aa		11.26	□□□□□ -0.61
KDM2B-208	ENST00000538379	POLK	Q9UBT6	870 aa		11.25	□□□□□ -0.61
KDM2B-208	ENST00000538379	SOS2	Q07890	1332 aa	Predicted RBP	11.25	□□□□□ -0.61
KDM2B-208	ENST00000538379	USP54	Q70EL1	1684 aa		11.24	□□□□□ -0.61
KDM2B-208	ENST00000538379	TNNT2	P45379	298 aa	Predicted RBP	11.24	□□□□□ -0.61
KDM2B-208	ENST00000538379	ZRANB1	Q9UGI0	708 aa		11.24	□□□□□ -0.61
KDM2B-208	ENST00000538379	KIF24	Q5T7B8	1368 aa		11.24	□□□□□ -0.61
KDM2B-208	ENST00000538379	PNPLA6	Q8IY17	1366 aa		11.24	□□□□□ -0.61
KDM2B-208	ENST00000538379	FAM9B	Q8IZU0	186 aa		11.23	□□□□□ -0.61
KDM2B-208	ENST00000538379	NUDC	Q9Y266	331 aa		11.23	□□□□□ -0.61
KDM2B-208	ENST00000538379	SPATA31A3	Q5VYP0	1347 aa		11.23	□□□□□ -0.61
KDM2B-208	ENST00000538379	UBAP1L	F5GYI3	381 aa		11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	ARHGEF10	O15013	1369 aa		11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	WDR43	Q15061	677 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	SMG6	Q86US8	1419 aa	Known RBP	11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	PXDN	Q92626	1479 aa		11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.22	□□□□□ -0.61
KDM2B-208	ENST00000538379	PIK3C2A	O00443	1686 aa		11.21	□□□□□ -0.61
KDM2B-208	ENST00000538379	MED1	Q15648	1581 aa	Predicted RBP	11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	TNS3	Q68CZ2	1445 aa		11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	USP19	O94966	1318 aa		11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	DIAPH1	O60610	1272 aa	Known RBP	11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	XPC	Q01831	940 aa	Predicted RBP	11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	LRRC59	Q96AG4	307 aa	Known RBP	11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	PNN	Q9H307	717 aa	Known RBP	11.2	□□□□□ -0.62
KDM2B-208	ENST00000538379	GC	P02774	474 aa		11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	LMOD2	Q6P5Q4	547 aa		11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	YTHDC1	Q96MU7	727 aa	Known RBP	11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	ADAMTS8	Q9UP79	889 aa		11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	GTF3C3	Q9Y5Q9	886 aa		11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	ALS2	Q96Q42	1657 aa		11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.19	□□□□□ -0.62
KDM2B-208	ENST00000538379	NHSL1	Q5SYE7	1610 aa		11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	NUTM2G	Q5VZR2	741 aa		11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	NGEF	Q8N5V2	710 aa		11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	DDX17	Q92841	729 aa	Known RBP	11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	EMILIN1	Q9Y6C2	1016 aa		11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	SLIT3	O75094	1523 aa		11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	MAP2	P11137	1827 aa	Known RBP	11.18	□□□□□ -0.62
KDM2B-208	ENST00000538379	RTL1	A6NKG5	1358 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	MAP3K19	Q56UN5	1328 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	PPM1G	O15355	546 aa	Predicted RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	FBLN1	P23142	703 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	AMPH	P49418	695 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	RRS1	Q15050	365 aa	Known RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	NCBP3	Q53F19	620 aa	Known RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	ARHGEF25	Q86VW2	580 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	PELP1	Q8IZL8	1130 aa	Known RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	IP6K1	Q92551	441 aa		11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	PHF23	Q9BUL5	403 aa	Predicted RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.17	□□□□□ -0.62
KDM2B-208	ENST00000538379	FLT4	P35916	1363 aa		11.16	□□□□□ -0.62
KDM2B-208	ENST00000538379	FCHSD2	O94868	740 aa		11.16	□□□□□ -0.62
KDM2B-208	ENST00000538379	IL13	P35225	146 aa		11.16	□□□□□ -0.62
KDM2B-208	ENST00000538379	MARF1	Q9Y4F3	1742 aa	Known RBP	11.15	□□□□□ -0.62
KDM2B-208	ENST00000538379	ROBO1	Q9Y6N7	1651 aa		11.15	□□□□□ -0.62
KDM2B-208	ENST00000538379	COL3A1	P02461	1466 aa	Predicted RBP	11.15	□□□□□ -0.62
KDM2B-208	ENST00000538379	HOXC9	P31274	260 aa		11.15	□□□□□ -0.62
KDM2B-208	ENST00000538379	NFAT5	O94916	1531 aa		11.14	□□□□□ -0.63
KDM2B-208	ENST00000538379	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.14	□□□□□ -0.63
KDM2B-208	ENST00000538379	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
KDM2B-208	ENST00000538379	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms