RNA–Protein interactions for RNA: ENST00000538346.5

PDE1B-203, Transcript of phosphodiesterase 1B, humanhuman

TSL 2 BASIC

Gene PDE1B, Length 1,711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-203ENST00000538346 ATP7BP35670 1465 aa17.29■□□□□ 0.36
PDE1B-203ENST00000538346 KIF20BQ96Q89 1820 aa17.29■□□□□ 0.36
PDE1B-203ENST00000538346 BCAR3O75815 825 aa17.29■□□□□ 0.36
PDE1B-203ENST00000538346 CENPQQ7L2Z9 268 aaPredicted RBP17.29■□□□□ 0.36
PDE1B-203ENST00000538346 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
PDE1B-203ENST00000538346 RRP7AQ9Y3A4 280 aaKnown RBP17.28■□□□□ 0.36
PDE1B-203ENST00000538346 U2AF1L5P0DN76 240 aaPredicted RBP17.27■□□□□ 0.36
PDE1B-203ENST00000538346 U2AF1Q01081 240 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDE1B-203ENST00000538346 STRCQ7RTU9 1775 aa17.27■□□□□ 0.36
PDE1B-203ENST00000538346 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.35
PDE1B-203ENST00000538346 KNDC1Q76NI1 1749 aa17.26■□□□□ 0.35
PDE1B-203ENST00000538346 NPHP4O75161 1426 aaPredicted RBP17.26■□□□□ 0.35
PDE1B-203ENST00000538346 PDE4AP27815 886 aa17.26■□□□□ 0.35
PDE1B-203ENST00000538346 PDE3AQ14432 1141 aa17.26■□□□□ 0.35
PDE1B-203ENST00000538346 NEUROD2Q15784 382 aa17.26■□□□□ 0.35
PDE1B-203ENST00000538346 CABP1Q9NZU7 370 aa17.26■□□□□ 0.35
PDE1B-203ENST00000538346 ADAMTS13Q76LX8 1427 aa17.25■□□□□ 0.35
PDE1B-203ENST00000538346 ANP32AP39687 249 aaKnown RBP17.25■□□□□ 0.35
PDE1B-203ENST00000538346 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
PDE1B-203ENST00000538346 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
PDE1B-203ENST00000538346 PNPLA6Q8IY17 1366 aa17.24■□□□□ 0.35
PDE1B-203ENST00000538346 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
PDE1B-203ENST00000538346 TECPR2O15040 1411 aa17.23■□□□□ 0.35
PDE1B-203ENST00000538346 METP08581 1390 aa17.23■□□□□ 0.35
PDE1B-203ENST00000538346 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
PDE1B-203ENST00000538346 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
PDE1B-203ENST00000538346 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
PDE1B-203ENST00000538346 CPS1P31327 1500 aa17.22■□□□□ 0.35
PDE1B-203ENST00000538346 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
PDE1B-203ENST00000538346 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
PDE1B-203ENST00000538346 MYH16Q9H6N6 1097 aa17.21■□□□□ 0.35
PDE1B-203ENST00000538346 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
PDE1B-203ENST00000538346 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.35
PDE1B-203ENST00000538346 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
PDE1B-203ENST00000538346 TBX22Q9Y458 520 aa17.2■□□□□ 0.34
PDE1B-203ENST00000538346 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
PDE1B-203ENST00000538346 EDC4Q6P2E9 1401 aaKnown RBP17.19■□□□□ 0.34
PDE1B-203ENST00000538346 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
PDE1B-203ENST00000538346 TMPOP42166 694 aaKnown RBP17.18■□□□□ 0.34
PDE1B-203ENST00000538346 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
PDE1B-203ENST00000538346 PPIP5K1Q6PFW1 1433 aa17.17■□□□□ 0.34
PDE1B-203ENST00000538346 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
PDE1B-203ENST00000538346 DIP2AQ14689 1571 aa17.17■□□□□ 0.34
PDE1B-203ENST00000538346 CT47B1P0C2W7 299 aaPredicted RBP17.16■□□□□ 0.34
PDE1B-203ENST00000538346 PNNQ9H307 717 aaKnown RBP17.16■□□□□ 0.34
PDE1B-203ENST00000538346 TRIM35Q9UPQ4 493 aa17.16■□□□□ 0.34
PDE1B-203ENST00000538346 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
PDE1B-203ENST00000538346 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
PDE1B-203ENST00000538346 AAMPQ13685 434 aa17.16■□□□□ 0.34
PDE1B-203ENST00000538346 IL16Q14005 1332 aa17.16■□□□□ 0.34
PDE1B-203ENST00000538346 MON2Q7Z3U7 1717 aa17.15■□□□□ 0.34
PDE1B-203ENST00000538346 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
PDE1B-203ENST00000538346 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
PDE1B-203ENST00000538346 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
PDE1B-203ENST00000538346 PAK3O75914 559 aaPredicted RBP17.14■□□□□ 0.33
PDE1B-203ENST00000538346 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
PDE1B-203ENST00000538346 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
PDE1B-203ENST00000538346 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
PDE1B-203ENST00000538346 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
PDE1B-203ENST00000538346 LRRC7Q96NW7 1537 aa17.13■□□□□ 0.33
PDE1B-203ENST00000538346 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
PDE1B-203ENST00000538346 FCHSD2O94868 740 aa17.13■□□□□ 0.33
PDE1B-203ENST00000538346 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
PDE1B-203ENST00000538346 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
PDE1B-203ENST00000538346 AATKQ6ZMQ8 1374 aa17.12■□□□□ 0.33
PDE1B-203ENST00000538346 KCNA6P17658 529 aa17.12■□□□□ 0.33
PDE1B-203ENST00000538346 ZBTB47Q9UFB7 747 aaPredicted RBP17.12■□□□□ 0.33
PDE1B-203ENST00000538346 IGHDP01880 384 aa17.11■□□□□ 0.33
PDE1B-203ENST00000538346 CCDC61Q9Y6R9 512 aa17.11■□□□□ 0.33
PDE1B-203ENST00000538346 CDK12Q9NYV4 1490 aaPredicted RBP17.11■□□□□ 0.33
PDE1B-203ENST00000538346 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
PDE1B-203ENST00000538346 ITSN1Q15811 1721 aa17.1■□□□□ 0.33
PDE1B-203ENST00000538346 RIPK4P57078 832 aa17.1■□□□□ 0.33
PDE1B-203ENST00000538346 RSPH6AQ9H0K4 717 aa17.1■□□□□ 0.33
PDE1B-203ENST00000538346 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
PDE1B-203ENST00000538346 ROBO2Q9HCK4 1378 aa17.09■□□□□ 0.33
PDE1B-203ENST00000538346 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
PDE1B-203ENST00000538346 RLBP1P12271 317 aa17.09■□□□□ 0.33
PDE1B-203ENST00000538346 FAM161AQ3B820 660 aa17.09■□□□□ 0.33
PDE1B-203ENST00000538346 NPM2Q86SE8 214 aaKnown RBP17.09■□□□□ 0.33
PDE1B-203ENST00000538346 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
PDE1B-203ENST00000538346 MAP2P11137 1827 aaKnown RBP17.09■□□□□ 0.33
PDE1B-203ENST00000538346 STRCP1A6NGW2 1772 aa17.09■□□□□ 0.33
PDE1B-203ENST00000538346 NME9Q86XW9 330 aa17.08■□□□□ 0.32
PDE1B-203ENST00000538346 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
PDE1B-203ENST00000538346 XRN1Q8IZH2 1706 aaKnown RBP17.08■□□□□ 0.32
PDE1B-203ENST00000538346 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
PDE1B-203ENST00000538346 TNNQ9UQP3 1299 aa17.07■□□□□ 0.32
PDE1B-203ENST00000538346 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
PDE1B-203ENST00000538346 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
PDE1B-203ENST00000538346 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-203ENST00000538346 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
PDE1B-203ENST00000538346 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
PDE1B-203ENST00000538346 FBLN1P23142 703 aa17.06■□□□□ 0.32
PDE1B-203ENST00000538346 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
PDE1B-203ENST00000538346 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
PDE1B-203ENST00000538346 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
PDE1B-203ENST00000538346 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
PDE1B-203ENST00000538346 IL13P35225 146 aa17.05■□□□□ 0.32
PDE1B-203ENST00000538346 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms