RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
LIMK1-208ENST00000538333 MON2Q7Z3U7 1717 aa18.21■□□□□ 0.51
LIMK1-208ENST00000538333 PPIP5K1Q6PFW1 1433 aa18.21■□□□□ 0.5
LIMK1-208ENST00000538333 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.5
LIMK1-208ENST00000538333 MAP2P11137 1827 aaKnown RBP18.2■□□□□ 0.5
LIMK1-208ENST00000538333 EDC4Q6P2E9 1401 aaKnown RBP18.2■□□□□ 0.5
LIMK1-208ENST00000538333 AKAP12Q02952 1782 aa18.19■□□□□ 0.5
LIMK1-208ENST00000538333 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
LIMK1-208ENST00000538333 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
LIMK1-208ENST00000538333 DIAPH1O60610 1272 aaKnown RBP18.18■□□□□ 0.5
LIMK1-208ENST00000538333 PDE4AP27815 886 aa18.18■□□□□ 0.5
LIMK1-208ENST00000538333 SKAP1Q86WV1 359 aa18.18■□□□□ 0.5
LIMK1-208ENST00000538333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.18■□□□□ 0.5
LIMK1-208ENST00000538333 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
LIMK1-208ENST00000538333 TMPOP42166 694 aaKnown RBP18.17■□□□□ 0.5
LIMK1-208ENST00000538333 MYH16Q9H6N6 1097 aa18.17■□□□□ 0.5
LIMK1-208ENST00000538333 PLEKHG1Q9ULL1 1385 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
LIMK1-208ENST00000538333 POLKQ9UBT6 870 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 TRIM35Q9UPQ4 493 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 ITSN1Q15811 1721 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 C3P01024 1663 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 ROBO2Q9HCK4 1378 aa18.16■□□□□ 0.5
LIMK1-208ENST00000538333 LRRC7Q96NW7 1537 aa18.15■□□□□ 0.5
LIMK1-208ENST00000538333 CCDC61Q9Y6R9 512 aa18.14■□□□□ 0.49
LIMK1-208ENST00000538333 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.14■□□□□ 0.49
LIMK1-208ENST00000538333 LTKP29376 864 aa18.14■□□□□ 0.49
LIMK1-208ENST00000538333 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
LIMK1-208ENST00000538333 FBLN1P23142 703 aa18.13■□□□□ 0.49
LIMK1-208ENST00000538333 ANP32AP39687 249 aaKnown RBP18.13■□□□□ 0.49
LIMK1-208ENST00000538333 PANK1Q8TE04 598 aa18.13■□□□□ 0.49
LIMK1-208ENST00000538333 NCKAP5LQ9HCH0 1330 aa18.13■□□□□ 0.49
LIMK1-208ENST00000538333 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
LIMK1-208ENST00000538333 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
LIMK1-208ENST00000538333 IL16Q14005 1332 aa18.12■□□□□ 0.49
LIMK1-208ENST00000538333 AATKQ6ZMQ8 1374 aa18.12■□□□□ 0.49
LIMK1-208ENST00000538333 CDK12Q9NYV4 1490 aaPredicted RBP18.12■□□□□ 0.49
LIMK1-208ENST00000538333 SLIT1O75093 1534 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 FCHSD2O94868 740 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 NME9Q86XW9 330 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 PNNQ9H307 717 aaKnown RBP18.11■□□□□ 0.49
LIMK1-208ENST00000538333 ARHGAP23Q9P227 1491 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
LIMK1-208ENST00000538333 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
LIMK1-208ENST00000538333 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
LIMK1-208ENST00000538333 IPO9Q96P70 1041 aaKnown RBP18.11■□□□□ 0.49
LIMK1-208ENST00000538333 COG6Q9Y2V7 657 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
LIMK1-208ENST00000538333 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
LIMK1-208ENST00000538333 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
LIMK1-208ENST00000538333 NRKQ7Z2Y5 1582 aa18.1■□□□□ 0.49
LIMK1-208ENST00000538333 CLUAP1Q96AJ1 413 aa18.1■□□□□ 0.49
LIMK1-208ENST00000538333 ERICH6Q7L0X2 663 aa18.09■□□□□ 0.49
LIMK1-208ENST00000538333 TSR2Q969E8 191 aaKnown RBP18.09■□□□□ 0.49
LIMK1-208ENST00000538333 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
LIMK1-208ENST00000538333 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
LIMK1-208ENST00000538333 RLBP1P12271 317 aa18.08■□□□□ 0.49
LIMK1-208ENST00000538333 RIPK4P57078 832 aa18.08■□□□□ 0.49
LIMK1-208ENST00000538333 BCL2L13Q9BXK5 485 aa18.08■□□□□ 0.49
LIMK1-208ENST00000538333 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.49
LIMK1-208ENST00000538333 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.49
LIMK1-208ENST00000538333 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
LIMK1-208ENST00000538333 IGHDP01880 384 aa18.07■□□□□ 0.48
LIMK1-208ENST00000538333 ZNF692Q9BU19 519 aaPredicted RBP18.07■□□□□ 0.48
LIMK1-208ENST00000538333 TNNQ9UQP3 1299 aa18.07■□□□□ 0.48
LIMK1-208ENST00000538333 AAMPQ13685 434 aa18.07■□□□□ 0.48
LIMK1-208ENST00000538333 IL13P35225 146 aa18.06■□□□□ 0.48
LIMK1-208ENST00000538333 PAK3O75914 559 aaPredicted RBP18.06■□□□□ 0.48
LIMK1-208ENST00000538333 PRKAR2BP31323 418 aa18.06■□□□□ 0.48
LIMK1-208ENST00000538333 EXOSC9Q06265 439 aaKnown RBP18.06■□□□□ 0.48
LIMK1-208ENST00000538333 COG3Q96JB2 828 aa18.05■□□□□ 0.48
LIMK1-208ENST00000538333 EID1Q9Y6B2 187 aa18.03■□□□□ 0.48
LIMK1-208ENST00000538333 PLEKHG3A1L390 1219 aa18.03■□□□□ 0.48
LIMK1-208ENST00000538333 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
LIMK1-208ENST00000538333 NALCNQ8IZF0 1738 aa18.02■□□□□ 0.48
LIMK1-208ENST00000538333 PHACTR3Q96KR7 559 aa18.02■□□□□ 0.48
LIMK1-208ENST00000538333 PTCH1Q13635 1447 aa18.02■□□□□ 0.47
LIMK1-208ENST00000538333 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 DIP2AQ14689 1571 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 DLG5Q8TDM6 1919 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 HMOX1P09601 288 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
LIMK1-208ENST00000538333 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 C8orf34Q49A92 452 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 OVOS2A0A0J9YW53 1432 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 OVOS2Q6IE36 1432 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 ACEP12821 1306 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
LIMK1-208ENST00000538333 NPM2Q86SE8 214 aaKnown RBP18■□□□□ 0.47
LIMK1-208ENST00000538333 SSH1Q8WYL5 1049 aa18■□□□□ 0.47
LIMK1-208ENST00000538333 USP6P35125 1406 aa18■□□□□ 0.47
LIMK1-208ENST00000538333 FAM161AQ3B820 660 aa18■□□□□ 0.47
LIMK1-208ENST00000538333 PCDHB15Q9Y5E8 787 aa18■□□□□ 0.47
LIMK1-208ENST00000538333 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
LIMK1-208ENST00000538333 RGS3P49796 1198 aa17.99■□□□□ 0.47
LIMK1-208ENST00000538333 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
LIMK1-208ENST00000538333 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
LIMK1-208ENST00000538333 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
LIMK1-208ENST00000538333 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms