RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
DDB1-211ENST00000538280 DUSP27Q5VZP5 1158 aa12.22□□□□□ -0.45
DDB1-211ENST00000538280 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
DDB1-211ENST00000538280 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
DDB1-211ENST00000538280 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
DDB1-211ENST00000538280 DCCP43146 1447 aa12.21□□□□□ -0.45
DDB1-211ENST00000538280 EXOC6Q8TAG9 804 aa12.21□□□□□ -0.45
DDB1-211ENST00000538280 ANP32EQ9BTT0 268 aa12.21□□□□□ -0.45
DDB1-211ENST00000538280 AMOTL2Q9Y2J4 779 aa12.21□□□□□ -0.45
DDB1-211ENST00000538280 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
DDB1-211ENST00000538280 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.46
DDB1-211ENST00000538280 METP08581 1390 aa12.2□□□□□ -0.46
DDB1-211ENST00000538280 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
DDB1-211ENST00000538280 CADPS2Q86UW7 1296 aa12.2□□□□□ -0.46
DDB1-211ENST00000538280 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
DDB1-211ENST00000538280 AFF2P51816 1311 aa12.19□□□□□ -0.46
DDB1-211ENST00000538280 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
DDB1-211ENST00000538280 ATF3P18847 181 aa12.19□□□□□ -0.46
DDB1-211ENST00000538280 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
DDB1-211ENST00000538280 ZNF772Q68DY9 489 aaPredicted RBP12.19□□□□□ -0.46
DDB1-211ENST00000538280 PNPLA6Q8IY17 1366 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 MSH5O43196 834 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 GOLGA2Q08379 1002 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.18□□□□□ -0.46
DDB1-211ENST00000538280 SLC12A5Q9H2X9 1139 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
DDB1-211ENST00000538280 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
DDB1-211ENST00000538280 NCBP3Q53F19 620 aaKnown RBP12.17□□□□□ -0.46
DDB1-211ENST00000538280 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
DDB1-211ENST00000538280 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
DDB1-211ENST00000538280 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
DDB1-211ENST00000538280 RXRBP28702 533 aa12.16□□□□□ -0.46
DDB1-211ENST00000538280 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
DDB1-211ENST00000538280 KNDC1Q76NI1 1749 aa12.15□□□□□ -0.46
DDB1-211ENST00000538280 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
DDB1-211ENST00000538280 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
DDB1-211ENST00000538280 KIF20BQ96Q89 1820 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
DDB1-211ENST00000538280 MORC1Q86VD1 984 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 EP400Q96L91 3159 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 COL22A1Q8NFW1 1626 aaPredicted RBP12.14□□□□□ -0.47
DDB1-211ENST00000538280 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
DDB1-211ENST00000538280 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
DDB1-211ENST00000538280 E9PSI1 815 aa12.13□□□□□ -0.47
DDB1-211ENST00000538280 APAF1O14727 1248 aa12.13□□□□□ -0.47
DDB1-211ENST00000538280 A0A1W2PP64 1363 aa12.13□□□□□ -0.47
DDB1-211ENST00000538280 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
DDB1-211ENST00000538280 CCDC146Q8IYE0 955 aa12.12□□□□□ -0.47
DDB1-211ENST00000538280 CDC42BPGQ6DT37 1551 aa12.11□□□□□ -0.47
DDB1-211ENST00000538280 PLIN1O60240 522 aa12.11□□□□□ -0.47
DDB1-211ENST00000538280 SPINK5Q9NQ38 1064 aaPredicted RBP12.11□□□□□ -0.47
DDB1-211ENST00000538280 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
DDB1-211ENST00000538280 ROBO2Q9HCK4 1378 aa12.1□□□□□ -0.47
DDB1-211ENST00000538280 MS4A1P11836 297 aa12.1□□□□□ -0.47
DDB1-211ENST00000538280 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
DDB1-211ENST00000538280 RUNDC1Q96C34 613 aa12.1□□□□□ -0.47
DDB1-211ENST00000538280 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
DDB1-211ENST00000538280 ATP7BP35670 1465 aa12.09□□□□□ -0.47
DDB1-211ENST00000538280 ADAMTS2O95450 1211 aa12.09□□□□□ -0.47
DDB1-211ENST00000538280 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
DDB1-211ENST00000538280 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
DDB1-211ENST00000538280 CABP2Q9NPB3 220 aa12.09□□□□□ -0.47
DDB1-211ENST00000538280 WWC1Q8IX03 1113 aa12.08□□□□□ -0.48
DDB1-211ENST00000538280 ORAI2Q96SN7 254 aa12.08□□□□□ -0.48
DDB1-211ENST00000538280 QTRT2Q9H974 415 aaKnown RBP12.08□□□□□ -0.48
DDB1-211ENST00000538280 TECPR2O15040 1411 aa12.08□□□□□ -0.48
DDB1-211ENST00000538280 MTHFSP49914 203 aa12.07□□□□□ -0.48
DDB1-211ENST00000538280 RBM6P78332 1123 aaKnown RBP12.07□□□□□ -0.48
DDB1-211ENST00000538280 LRRC59Q96AG4 307 aaKnown RBP12.07□□□□□ -0.48
DDB1-211ENST00000538280 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
DDB1-211ENST00000538280 PRAM1Q96QH2 718 aa12.07□□□□□ -0.48
DDB1-211ENST00000538280 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
DDB1-211ENST00000538280 ATRNO75882 1429 aa12.06□□□□□ -0.48
DDB1-211ENST00000538280 WDR63Q8IWG1 891 aa12.06□□□□□ -0.48
DDB1-211ENST00000538280 PXDNQ92626 1479 aa12.06□□□□□ -0.48
DDB1-211ENST00000538280 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
DDB1-211ENST00000538280 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
DDB1-211ENST00000538280 SOS2Q07890 1332 aaPredicted RBP12.05□□□□□ -0.48
DDB1-211ENST00000538280 GLI3P10071 1580 aa12.05□□□□□ -0.48
DDB1-211ENST00000538280 SRPK2P78362 688 aaKnown RBP12.04□□□□□ -0.48
DDB1-211ENST00000538280 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
DDB1-211ENST00000538280 TCP11L2Q8N4U5 519 aa12.04□□□□□ -0.48
DDB1-211ENST00000538280 TERF2IPQ9NYB0 399 aa12.04□□□□□ -0.48
DDB1-211ENST00000538280 STK26Q9P289 416 aa12.04□□□□□ -0.48
DDB1-211ENST00000538280 AKAP12Q02952 1782 aa12.04□□□□□ -0.48
DDB1-211ENST00000538280 ABCA3Q99758 1704 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 RGPD8O14715 1765 aaPredicted RBP12.03□□□□□ -0.48
DDB1-211ENST00000538280 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 SIRT1Q96EB6 747 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 NGLY1Q96IV0 654 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 POGKQ9P215 609 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 MINK1Q8N4C8 1332 aaPredicted RBP12.03□□□□□ -0.48
DDB1-211ENST00000538280 FMN2Q9NZ56 1722 aa12.03□□□□□ -0.48
DDB1-211ENST00000538280 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.48
DDB1-211ENST00000538280 FYB1O15117 783 aa12.02□□□□□ -0.49
DDB1-211ENST00000538280 SAFB2Q14151 953 aaKnown RBP eCLIP12.02□□□□□ -0.49
DDB1-211ENST00000538280 CDK19Q9BWU1 502 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms