RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 GNPATO15228 680 aa8.99□□□□□ -0.97
DDB1-210ENST00000538129 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
DDB1-210ENST00000538129 CDHR5Q9HBB8 845 aa8.99□□□□□ -0.97
DDB1-210ENST00000538129 SIGLEC1Q9BZZ2 1709 aa8.99□□□□□ -0.97
DDB1-210ENST00000538129 ANKRD30AQ9BXX3 1397 aa8.99□□□□□ -0.97
DDB1-210ENST00000538129 ADAMTSL3P82987 1691 aa8.98□□□□□ -0.97
DDB1-210ENST00000538129 LAPTM4BQ86VI4 370 aa8.98□□□□□ -0.97
DDB1-210ENST00000538129 RRP7BPQ9NSQ0 103 aa8.98□□□□□ -0.97
DDB1-210ENST00000538129 KIAA1468Q9P260 1216 aa8.98□□□□□ -0.97
DDB1-210ENST00000538129 CHIC2Q9UKJ5 165 aa8.98□□□□□ -0.97
DDB1-210ENST00000538129 CROCC2H7BZ55 1655 aa8.97□□□□□ -0.97
DDB1-210ENST00000538129 NCOA1Q15788 1441 aa8.97□□□□□ -0.97
DDB1-210ENST00000538129 KIF3BO15066 747 aa8.97□□□□□ -0.97
DDB1-210ENST00000538129 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
DDB1-210ENST00000538129 ESF1Q9H501 851 aaKnown RBP8.97□□□□□ -0.97
DDB1-210ENST00000538129 NPDC1Q9NQX5 325 aaPredicted RBP8.97□□□□□ -0.97
DDB1-210ENST00000538129 PLXNC1O60486 1568 aa8.97□□□□□ -0.97
DDB1-210ENST00000538129 DUOX2Q9NRD8 1548 aa8.96□□□□□ -0.97
DDB1-210ENST00000538129 OATP04181 439 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 ITGAEP38570 1179 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 GGT6Q6P531 493 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 RBM46Q8TBY0 533 aaKnown RBP8.96□□□□□ -0.98
DDB1-210ENST00000538129 ROCK1Q13464 1354 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 KIF15Q9NS87 1388 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 PTPRKQ15262 1439 aa8.96□□□□□ -0.98
DDB1-210ENST00000538129 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
DDB1-210ENST00000538129 ADGRL2O95490 1459 aa8.95□□□□□ -0.98
DDB1-210ENST00000538129 KRI1Q8N9T8 703 aaKnown RBP8.94□□□□□ -0.98
DDB1-210ENST00000538129 PNMA3Q9UL41 463 aa8.94□□□□□ -0.98
DDB1-210ENST00000538129 SETD1BQ9UPS6 1966 aaKnown RBP8.93□□□□□ -0.98
DDB1-210ENST00000538129 HRO43593 1189 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
DDB1-210ENST00000538129 TATDN2Q93075 761 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 TSKSQ9UJT2 592 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 ERBINQ96RT1 1412 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 CNTLNQ9NXG0 1405 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 PTPRMP28827 1452 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 MADDQ8WXG6 1647 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 FER1L4A9Z1Z3 1794 aa8.93□□□□□ -0.98
DDB1-210ENST00000538129 EIF2AK4Q9P2K8 1649 aaKnown RBP8.92□□□□□ -0.98
DDB1-210ENST00000538129 ZMYM3Q14202 1370 aa8.92□□□□□ -0.98
DDB1-210ENST00000538129 WASHC2CQ9Y4E1 1318 aa8.92□□□□□ -0.98
DDB1-210ENST00000538129 BHMG1C9JSJ3 638 aaPredicted RBP8.92□□□□□ -0.98
DDB1-210ENST00000538129 SPNS2Q8IVW8 549 aa8.92□□□□□ -0.98
DDB1-210ENST00000538129 NECTIN2Q92692 538 aa8.92□□□□□ -0.98
DDB1-210ENST00000538129 RIMS1Q86UR5 1692 aaKnown RBP8.91□□□□□ -0.98
DDB1-210ENST00000538129 ANKRD50Q9ULJ7 1429 aa8.91□□□□□ -0.98
DDB1-210ENST00000538129 MINK1Q8N4C8 1332 aaPredicted RBP8.91□□□□□ -0.98
DDB1-210ENST00000538129 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
DDB1-210ENST00000538129 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
DDB1-210ENST00000538129 ANKK1Q8NFD2 765 aa8.91□□□□□ -0.98
DDB1-210ENST00000538129 CEBPAP49715 358 aaPredicted RBP8.9□□□□□ -0.98
DDB1-210ENST00000538129 MAP2K5Q13163 448 aa8.9□□□□□ -0.98
DDB1-210ENST00000538129 ZC3H15Q8WU90 426 aaKnown RBP8.9□□□□□ -0.98
DDB1-210ENST00000538129 RNF17Q9BXT8 1623 aaKnown RBP8.9□□□□□ -0.99
DDB1-210ENST00000538129 FAM135AQ9P2D6 1515 aa8.9□□□□□ -0.99
DDB1-210ENST00000538129 KANK1Q14678 1352 aa8.88□□□□□ -0.99
DDB1-210ENST00000538129 MROH2AA6NES4 1674 aa8.88□□□□□ -0.99
DDB1-210ENST00000538129 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
DDB1-210ENST00000538129 CLTCQ00610 1675 aaKnown RBP8.88□□□□□ -0.99
DDB1-210ENST00000538129 KDM5DQ9BY66 1539 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 GPR37O15354 613 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 DNAJB2P25686 324 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 WNT2BQ93097 391 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 ZFRQ96KR1 1074 aaKnown RBP8.87□□□□□ -0.99
DDB1-210ENST00000538129 SEPT9Q9UHD8 586 aaPredicted RBP8.87□□□□□ -0.99
DDB1-210ENST00000538129 C3P01024 1663 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 NAIPQ13075 1403 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
DDB1-210ENST00000538129 ACIN1Q9UKV3 1341 aaKnown RBP8.86□□□□□ -0.99
DDB1-210ENST00000538129 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
DDB1-210ENST00000538129 ZMYND10O75800 440 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 LRCH3Q96II8 777 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 MROH1Q8NDA8 1641 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 HFM1A2PYH4 1435 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 NPATQ14207 1427 aa8.86□□□□□ -0.99
DDB1-210ENST00000538129 PRDM15P57071 1507 aaPredicted RBP8.85□□□□□ -0.99
DDB1-210ENST00000538129 ZC3H13Q5T200 1668 aaKnown RBP8.85□□□□□ -0.99
DDB1-210ENST00000538129 IRF6O14896 467 aa8.85□□□□□ -0.99
DDB1-210ENST00000538129 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.85□□□□□ -0.99
DDB1-210ENST00000538129 ABCC3O15438 1527 aa8.85□□□□□ -0.99
DDB1-210ENST00000538129 CFAP65Q6ZU64 1925 aaKnown RBP8.84□□□□□ -0.99
DDB1-210ENST00000538129 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
DDB1-210ENST00000538129 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 VWDEQ8N2E2 1590 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 KCTD12Q96CX2 325 aaKnown RBP8.84□□□□□ -0.99
DDB1-210ENST00000538129 FAM198AQ9UFP1 575 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 LMTK2Q8IWU2 1503 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 NUP155O75694 1391 aa8.84□□□□□ -0.99
DDB1-210ENST00000538129 PZPP20742 1482 aa8.83□□□□□ -1
DDB1-210ENST00000538129 SMAPO00193 183 aa8.83□□□□□ -1
DDB1-210ENST00000538129 MMRN1Q13201 1228 aa8.83□□□□□ -1
DDB1-210ENST00000538129 METTL3Q86U44 580 aaKnown RBP8.83□□□□□ -1
DDB1-210ENST00000538129 PXYLP1Q8TE99 480 aa8.83□□□□□ -1
DDB1-210ENST00000538129 EYA1Q99502 592 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms