RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 FDX1P10109 184 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 GUCA2AQ02747 115 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 KCTD12Q96CX2 325 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 WBP1LQ9NX94 342 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 PCDHGC3Q9UN70 934 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 PCDHB15Q9Y5E8 787 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 CCNB3Q8WWL7 1395 aa8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 EPRSP07814 1512 aaKnown RBP8.29□□□□□ -1.08
NPIPB3-208ENST00000537983 ZEB1P37275 1124 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-208ENST00000537983 ATP6V1AP38606 617 aa8.28□□□□□ -1.08
NPIPB3-208ENST00000537983 PPP2R2DQ66LE6 453 aa8.28□□□□□ -1.08
NPIPB3-208ENST00000537983 PRR14Q9BWN1 585 aa8.28□□□□□ -1.08
NPIPB3-208ENST00000537983 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 LILRB3O75022 631 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 QPCTQ16769 361 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 GRIPAP1Q4V328 841 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 MORN1Q5T089 497 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 PCDH10Q9P2E7 1040 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 ARHGEF11O15085 1522 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 CLASP1Q7Z460 1538 aa8.27□□□□□ -1.09
NPIPB3-208ENST00000537983 PHLDB1Q86UU1 1377 aa8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 CSPP1Q1MSJ5 1256 aa8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 PRPF38BQ5VTL8 546 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 ABCA8O94911 1581 aa8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-208ENST00000537983 CDK13Q14004 1512 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 MAGI3Q5TCQ9 1506 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 RFC5P40937 340 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 CABLES1Q8TDN4 633 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 TIMELESSQ9UNS1 1208 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 NCOA2Q15596 1464 aa8.25□□□□□ -1.09
NPIPB3-208ENST00000537983 ATP1B4Q9UN42 357 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-208ENST00000537983 FGD6Q6ZV73 1430 aa8.23□□□□□ -1.09
NPIPB3-208ENST00000537983 ADCY10Q96PN6 1610 aa8.23□□□□□ -1.09
NPIPB3-208ENST00000537983 RTL5Q5HYW3 569 aaPredicted RBP8.23□□□□□ -1.09
NPIPB3-208ENST00000537983 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
NPIPB3-208ENST00000537983 SLC27A5Q9Y2P5 690 aa8.23□□□□□ -1.09
NPIPB3-208ENST00000537983 MYOM3Q5VTT5 1437 aa8.22□□□□□ -1.09
NPIPB3-208ENST00000537983 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
NPIPB3-208ENST00000537983 NYAP1Q6ZVC0 841 aa8.22□□□□□ -1.09
NPIPB3-208ENST00000537983 SPNS2Q8IVW8 549 aa8.22□□□□□ -1.09
NPIPB3-208ENST00000537983 PCDHB3Q9Y5E6 796 aa8.22□□□□□ -1.09
NPIPB3-208ENST00000537983 PLB1Q6P1J6 1458 aa8.21□□□□□ -1.09
NPIPB3-208ENST00000537983 BLOC1S3Q6QNY0 202 aa8.21□□□□□ -1.1
NPIPB3-208ENST00000537983 TCOF1Q13428 1488 aaKnown RBP8.2□□□□□ -1.1
NPIPB3-208ENST00000537983 MTMR2Q13614 643 aa8.2□□□□□ -1.1
NPIPB3-208ENST00000537983 PTPN23Q9H3S7 1636 aa8.2□□□□□ -1.1
NPIPB3-208ENST00000537983 ITSN2Q9NZM3 1697 aa8.2□□□□□ -1.1
NPIPB3-208ENST00000537983 TROQ12816 1431 aaPredicted RBP8.2□□□□□ -1.1
NPIPB3-208ENST00000537983 SPDYE5A6NIY4 337 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 NUTM2BA6NNL0 878 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 NUTM2EB1AL46 878 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 PTPN5P54829 565 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 FLIIQ13045 1269 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 MCM6Q14566 821 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 Q3C1V9 767 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 TMEM259Q4ZIN3 620 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 NUTM2DQ5VT03 806 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 RNF19BQ6ZMZ0 732 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 NUTM2AQ8IVF1 878 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 BANK1Q8NDB2 785 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 SYMPKQ92797 1274 aaKnown RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 THAP11Q96EK4 314 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 SALL2Q9Y467 1007 aaPredicted RBP8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 MIA2Q96PC5 1412 aa8.19□□□□□ -1.1
NPIPB3-208ENST00000537983 CFAP99D6REC4 459 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 C6orf229H3BNL8 230 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 NR1I2O75469 434 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 RETREG3Q86VR2 466 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 CCER1Q8TC90 406 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 CDK11AQ9UQ88 783 aaPredicted RBP8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 PTPRGP23470 1445 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 ABCC2Q92887 1545 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 KIF14Q15058 1648 aa8.18□□□□□ -1.1
NPIPB3-208ENST00000537983 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
NPIPB3-208ENST00000537983 COPS2P61201 443 aa8.16□□□□□ -1.1
NPIPB3-208ENST00000537983 ERCC6L2Q5T890 1561 aa8.16□□□□□ -1.1
NPIPB3-208ENST00000537983 UACAQ9BZF9 1416 aa8.16□□□□□ -1.1
NPIPB3-208ENST00000537983 UHRF1BP1LA0JNW5 1464 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 ATP10BO94823 1461 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 TJAP1Q5JTD0 557 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 PRR7Q8TB68 274 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 MTRQ99707 1265 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
NPIPB3-208ENST00000537983 SETD5Q9C0A6 1442 aa8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 SOCS7O14512 581 aa8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 AP1G2O75843 785 aa8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 FAM50AQ14320 339 aaKnown RBP8.14□□□□□ -1.11
NPIPB3-208ENST00000537983 MTMR14Q8NCE2 650 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms