RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
PEX11B-203ENST00000537888 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
PEX11B-203ENST00000537888 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
PEX11B-203ENST00000537888 CARD11Q9BXL7 1154 aa17.72■□□□□ 0.43
PEX11B-203ENST00000537888 SBNO2Q9Y2G9 1366 aa17.72■□□□□ 0.43
PEX11B-203ENST00000537888 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
PEX11B-203ENST00000537888 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
PEX11B-203ENST00000537888 CRYBG1Q9Y4K1 1723 aa17.71■□□□□ 0.42
PEX11B-203ENST00000537888 PPIP5K1Q6PFW1 1433 aa17.71■□□□□ 0.42
PEX11B-203ENST00000537888 BCL9LQ86UU0 1499 aa17.7■□□□□ 0.42
PEX11B-203ENST00000537888 CDK12Q9NYV4 1490 aaPredicted RBP17.7■□□□□ 0.42
PEX11B-203ENST00000537888 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
PEX11B-203ENST00000537888 ACEP12821 1306 aa17.7■□□□□ 0.42
PEX11B-203ENST00000537888 CABLES1Q8TDN4 633 aa17.69■□□□□ 0.42
PEX11B-203ENST00000537888 SLIT2O94813 1529 aa17.69■□□□□ 0.42
PEX11B-203ENST00000537888 ATRNO75882 1429 aa17.68■□□□□ 0.42
PEX11B-203ENST00000537888 USP21Q9UK80 565 aa17.68■□□□□ 0.42
PEX11B-203ENST00000537888 EVC2Q86UK5 1308 aa17.67■□□□□ 0.42
PEX11B-203ENST00000537888 RXRBP28702 533 aa17.67■□□□□ 0.42
PEX11B-203ENST00000537888 LMOD2Q6P5Q4 547 aa17.67■□□□□ 0.42
PEX11B-203ENST00000537888 QTRT2Q9H974 415 aaKnown RBP17.67■□□□□ 0.42
PEX11B-203ENST00000537888 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.66■□□□□ 0.42
PEX11B-203ENST00000537888 RGS12O14924 1447 aa17.65■□□□□ 0.42
PEX11B-203ENST00000537888 RBM6P78332 1123 aaKnown RBP17.65■□□□□ 0.42
PEX11B-203ENST00000537888 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
PEX11B-203ENST00000537888 CABP1Q9NZU7 370 aa17.64■□□□□ 0.41
PEX11B-203ENST00000537888 TRPC5Q9UL62 973 aaPredicted RBP17.64■□□□□ 0.41
PEX11B-203ENST00000537888 SSH2Q76I76 1423 aa17.63■□□□□ 0.41
PEX11B-203ENST00000537888 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
PEX11B-203ENST00000537888 USP6P35125 1406 aa17.63■□□□□ 0.41
PEX11B-203ENST00000537888 PHRF1Q9P1Y6 1649 aaKnown RBP17.63■□□□□ 0.41
PEX11B-203ENST00000537888 PLCH1Q4KWH8 1693 aa17.62■□□□□ 0.41
PEX11B-203ENST00000537888 ST20-MTHFSA0A0A6YYL1 179 aa17.62■□□□□ 0.41
PEX11B-203ENST00000537888 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
PEX11B-203ENST00000537888 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
PEX11B-203ENST00000537888 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
PEX11B-203ENST00000537888 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
PEX11B-203ENST00000537888 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
PEX11B-203ENST00000537888 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
PEX11B-203ENST00000537888 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
PEX11B-203ENST00000537888 TESK2Q96S53 571 aa17.6■□□□□ 0.41
PEX11B-203ENST00000537888 GLI3P10071 1580 aa17.59■□□□□ 0.41
PEX11B-203ENST00000537888 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
PEX11B-203ENST00000537888 USP19O94966 1318 aa17.59■□□□□ 0.41
PEX11B-203ENST00000537888 FAM83GA6ND36 823 aa17.59■□□□□ 0.41
PEX11B-203ENST00000537888 NRAPQ86VF7 1730 aa17.59■□□□□ 0.41
PEX11B-203ENST00000537888 NRKQ7Z2Y5 1582 aa17.59■□□□□ 0.41
PEX11B-203ENST00000537888 EP400Q96L91 3159 aa17.58■□□□□ 0.41
PEX11B-203ENST00000537888 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.41
PEX11B-203ENST00000537888 AKAP12Q02952 1782 aa17.58■□□□□ 0.4
PEX11B-203ENST00000537888 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
PEX11B-203ENST00000537888 CD163L1Q9NR16 1453 aa17.57■□□□□ 0.4
PEX11B-203ENST00000537888 NUTM2GQ5VZR2 741 aa17.56■□□□□ 0.4
PEX11B-203ENST00000537888 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
PEX11B-203ENST00000537888 PIK3C2AO00443 1686 aa17.56■□□□□ 0.4
PEX11B-203ENST00000537888 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
PEX11B-203ENST00000537888 VPS72Q15906 364 aa17.54■□□□□ 0.4
PEX11B-203ENST00000537888 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
PEX11B-203ENST00000537888 MON2Q7Z3U7 1717 aa17.54■□□□□ 0.4
PEX11B-203ENST00000537888 SLIT3O75094 1523 aa17.54■□□□□ 0.4
PEX11B-203ENST00000537888 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
PEX11B-203ENST00000537888 CPDO75976 1380 aa17.53■□□□□ 0.4
PEX11B-203ENST00000537888 PRDM11Q9NQV5 511 aa17.52■□□□□ 0.4
PEX11B-203ENST00000537888 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
PEX11B-203ENST00000537888 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.39
PEX11B-203ENST00000537888 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
PEX11B-203ENST00000537888 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
PEX11B-203ENST00000537888 KTN1Q86UP2 1357 aaKnown RBP17.5■□□□□ 0.39
PEX11B-203ENST00000537888 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
PEX11B-203ENST00000537888 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
PEX11B-203ENST00000537888 TTC21AQ8NDW8 1320 aa17.49■□□□□ 0.39
PEX11B-203ENST00000537888 GCP02774 474 aa17.49■□□□□ 0.39
PEX11B-203ENST00000537888 CHRNA2Q15822 529 aa17.49■□□□□ 0.39
PEX11B-203ENST00000537888 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
PEX11B-203ENST00000537888 ONECUT3O60422 494 aaPredicted RBP17.48■□□□□ 0.39
PEX11B-203ENST00000537888 NLRP6P59044 892 aa17.48■□□□□ 0.39
PEX11B-203ENST00000537888 A0A1W2PP64 1363 aa17.48■□□□□ 0.39
PEX11B-203ENST00000537888 NINLQ9Y2I6 1382 aa17.48■□□□□ 0.39
PEX11B-203ENST00000537888 CAMTA1Q9Y6Y1 1673 aa17.48■□□□□ 0.39
PEX11B-203ENST00000537888 SLC24A1O60721 1099 aa17.47■□□□□ 0.39
PEX11B-203ENST00000537888 USP54Q70EL1 1684 aa17.47■□□□□ 0.39
PEX11B-203ENST00000537888 TMF1P82094 1093 aa17.46■□□□□ 0.39
PEX11B-203ENST00000537888 TMC1Q8TDI8 760 aa17.46■□□□□ 0.39
PEX11B-203ENST00000537888 SPATA31A5Q5VU36 1347 aa17.46■□□□□ 0.38
PEX11B-203ENST00000537888 SPATA31A7Q8IWB4 1347 aa17.46■□□□□ 0.38
PEX11B-203ENST00000537888 USP31Q70CQ4 1352 aa17.45■□□□□ 0.38
PEX11B-203ENST00000537888 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
PEX11B-203ENST00000537888 POLR3GLQ9BT43 218 aa17.45■□□□□ 0.38
PEX11B-203ENST00000537888 NFAT5O94916 1531 aa17.45■□□□□ 0.38
PEX11B-203ENST00000537888 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
PEX11B-203ENST00000537888 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 COL18A1P39060 1754 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 HDGFL2Q7Z4V5 671 aaPredicted RBP17.43■□□□□ 0.38
PEX11B-203ENST00000537888 SEPT12Q8IYM1 358 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 BRWD3Q6RI45 1802 aa17.43■□□□□ 0.38
PEX11B-203ENST00000537888 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
PEX11B-203ENST00000537888 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
PEX11B-203ENST00000537888 RALBP1Q15311 655 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms