RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 FYB1O15117 783 aa16.69■□□□□ 0.26
DDB1-209ENST00000537877 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
DDB1-209ENST00000537877 PMFBP1Q8TBY8 1022 aa16.69■□□□□ 0.26
DDB1-209ENST00000537877 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
DDB1-209ENST00000537877 TTC21BQ7Z4L5 1316 aa16.68■□□□□ 0.26
DDB1-209ENST00000537877 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
DDB1-209ENST00000537877 CCDC184Q52MB2 194 aa16.67■□□□□ 0.26
DDB1-209ENST00000537877 ESCO1Q5FWF5 840 aa16.66■□□□□ 0.26
DDB1-209ENST00000537877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
DDB1-209ENST00000537877 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
DDB1-209ENST00000537877 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
DDB1-209ENST00000537877 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
DDB1-209ENST00000537877 PIK3C2AO00443 1686 aa16.65■□□□□ 0.26
DDB1-209ENST00000537877 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
DDB1-209ENST00000537877 NME9Q86XW9 330 aa16.64■□□□□ 0.25
DDB1-209ENST00000537877 USP31Q70CQ4 1352 aa16.63■□□□□ 0.25
DDB1-209ENST00000537877 TRPM3Q9HCF6 1732 aaPredicted RBP16.63■□□□□ 0.25
DDB1-209ENST00000537877 COG3Q96JB2 828 aa16.63■□□□□ 0.25
DDB1-209ENST00000537877 ORAI2Q96SN7 254 aa16.63■□□□□ 0.25
DDB1-209ENST00000537877 AATKQ6ZMQ8 1374 aa16.61■□□□□ 0.25
DDB1-209ENST00000537877 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
DDB1-209ENST00000537877 SMG6Q86US8 1419 aaKnown RBP16.59■□□□□ 0.25
DDB1-209ENST00000537877 MARF1Q9Y4F3 1742 aaKnown RBP16.59■□□□□ 0.25
DDB1-209ENST00000537877 TNNT2P45379 298 aaPredicted RBP16.59■□□□□ 0.25
DDB1-209ENST00000537877 PSME1Q06323 249 aa16.59■□□□□ 0.25
DDB1-209ENST00000537877 YTHDC1Q96MU7 727 aaKnown RBP16.59■□□□□ 0.25
DDB1-209ENST00000537877 INSRP06213 1382 aa16.59■□□□□ 0.25
DDB1-209ENST00000537877 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.24
DDB1-209ENST00000537877 FOXO3O43524 673 aa16.57■□□□□ 0.24
DDB1-209ENST00000537877 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
DDB1-209ENST00000537877 CFAP53Q96M91 514 aa16.57■□□□□ 0.24
DDB1-209ENST00000537877 SHPRHQ149N8 1683 aa16.57■□□□□ 0.24
DDB1-209ENST00000537877 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
DDB1-209ENST00000537877 MTHFSP49914 203 aa16.56■□□□□ 0.24
DDB1-209ENST00000537877 ZRANB1Q9UGI0 708 aa16.56■□□□□ 0.24
DDB1-209ENST00000537877 CDK12Q9NYV4 1490 aaPredicted RBP16.56■□□□□ 0.24
DDB1-209ENST00000537877 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
DDB1-209ENST00000537877 SBNO1A3KN83 1393 aa16.55■□□□□ 0.24
DDB1-209ENST00000537877 BRINP3Q76B58 766 aa16.55■□□□□ 0.24
DDB1-209ENST00000537877 PXDNQ92626 1479 aa16.55■□□□□ 0.24
DDB1-209ENST00000537877 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
DDB1-209ENST00000537877 NHSL1Q5SYE7 1610 aa16.54■□□□□ 0.24
DDB1-209ENST00000537877 COL3A1P02461 1466 aaPredicted RBP16.54■□□□□ 0.24
DDB1-209ENST00000537877 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
DDB1-209ENST00000537877 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
DDB1-209ENST00000537877 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
DDB1-209ENST00000537877 NLRP6P59044 892 aa16.53■□□□□ 0.24
DDB1-209ENST00000537877 ABTB2Q8N961 1025 aa16.53■□□□□ 0.24
DDB1-209ENST00000537877 SLIT3O75094 1523 aa16.53■□□□□ 0.24
DDB1-209ENST00000537877 IQSEC2Q5JU85 1478 aa16.53■□□□□ 0.24
DDB1-209ENST00000537877 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDB1-209ENST00000537877 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.23
DDB1-209ENST00000537877 TNS3Q68CZ2 1445 aa16.52■□□□□ 0.23
DDB1-209ENST00000537877 POLKQ9UBT6 870 aa16.51■□□□□ 0.23
DDB1-209ENST00000537877 MED1Q15648 1581 aaPredicted RBP16.51■□□□□ 0.23
DDB1-209ENST00000537877 NFAT5O94916 1531 aa16.5■□□□□ 0.23
DDB1-209ENST00000537877 XPCQ01831 940 aaPredicted RBP16.5■□□□□ 0.23
DDB1-209ENST00000537877 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
DDB1-209ENST00000537877 USP19O94966 1318 aa16.49■□□□□ 0.23
DDB1-209ENST00000537877 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
DDB1-209ENST00000537877 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
DDB1-209ENST00000537877 PHRF1Q9P1Y6 1649 aaKnown RBP16.49■□□□□ 0.23
DDB1-209ENST00000537877 PEAK1Q9H792 1746 aa16.48■□□□□ 0.23
DDB1-209ENST00000537877 ARHGEF10O15013 1369 aa16.48■□□□□ 0.23
DDB1-209ENST00000537877 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
DDB1-209ENST00000537877 HNRNPUQ00839 825 aaKnown RBP eCLIP16.48■□□□□ 0.23
DDB1-209ENST00000537877 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
DDB1-209ENST00000537877 SOS2Q07890 1332 aaPredicted RBP16.47■□□□□ 0.23
DDB1-209ENST00000537877 CRYBG1Q9Y4K1 1723 aa16.47■□□□□ 0.23
DDB1-209ENST00000537877 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
DDB1-209ENST00000537877 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
DDB1-209ENST00000537877 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
DDB1-209ENST00000537877 SPATA31A3Q5VYP0 1347 aa16.46■□□□□ 0.23
DDB1-209ENST00000537877 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
DDB1-209ENST00000537877 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
DDB1-209ENST00000537877 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
DDB1-209ENST00000537877 LTN1O94822 1766 aa16.46■□□□□ 0.23
DDB1-209ENST00000537877 FLT4P35916 1363 aa16.46■□□□□ 0.23
DDB1-209ENST00000537877 DIAPH1O60610 1272 aaKnown RBP16.45■□□□□ 0.22
DDB1-209ENST00000537877 FBLN1P23142 703 aa16.45■□□□□ 0.22
DDB1-209ENST00000537877 DDX17Q92841 729 aaKnown RBP16.45■□□□□ 0.22
DDB1-209ENST00000537877 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
DDB1-209ENST00000537877 PPM1GO15355 546 aaPredicted RBP16.44■□□□□ 0.22
DDB1-209ENST00000537877 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
DDB1-209ENST00000537877 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
DDB1-209ENST00000537877 SOX12O15370 315 aa16.42■□□□□ 0.22
DDB1-209ENST00000537877 TOM1O60784 492 aa16.41■□□□□ 0.22
DDB1-209ENST00000537877 ABCC6O95255 1503 aa16.41■□□□□ 0.22
DDB1-209ENST00000537877 ABCA3Q99758 1704 aa16.41■□□□□ 0.22
DDB1-209ENST00000537877 GCP02774 474 aa16.4■□□□□ 0.22
DDB1-209ENST00000537877 RGPD1P0DJD0 1748 aa16.4■□□□□ 0.22
DDB1-209ENST00000537877 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
DDB1-209ENST00000537877 IL13P35225 146 aa16.39■□□□□ 0.21
DDB1-209ENST00000537877 AMPHP49418 695 aa16.39■□□□□ 0.21
DDB1-209ENST00000537877 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.212e-7■■□□□ 11.4
DDB1-209ENST00000537877 U2SURPO15042 1029 aaKnown RBP16.38■□□□□ 0.21
DDB1-209ENST00000537877 HOXC9P31274 260 aa16.38■□□□□ 0.21
DDB1-209ENST00000537877 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
DDB1-209ENST00000537877 PHLPP1O60346 1717 aa16.37■□□□□ 0.21
DDB1-209ENST00000537877 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms