RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 ROBO2Q9HCK4 1378 aa12.14□□□□□ -0.47
PTPRR-205ENST00000537619 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
PTPRR-205ENST00000537619 LTKP29376 864 aa12.13□□□□□ -0.47
PTPRR-205ENST00000537619 RARSP54136 660 aaKnown RBP12.13□□□□□ -0.47
PTPRR-205ENST00000537619 NCBP3Q53F19 620 aaKnown RBP12.13□□□□□ -0.47
PTPRR-205ENST00000537619 PRR36Q9H6K5 1346 aa12.13□□□□□ -0.47
PTPRR-205ENST00000537619 CEBPAP49715 358 aaPredicted RBP12.13□□□□□ -0.47
PTPRR-205ENST00000537619 ZRANB1Q9UGI0 708 aa12.13□□□□□ -0.47
PTPRR-205ENST00000537619 TNNQ9UQP3 1299 aa12.13□□□□□ -0.47
PTPRR-205ENST00000537619 EDC4Q6P2E9 1401 aaKnown RBP12.13□□□□□ -0.47
PTPRR-205ENST00000537619 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
PTPRR-205ENST00000537619 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
PTPRR-205ENST00000537619 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
PTPRR-205ENST00000537619 TRIM35Q9UPQ4 493 aa12.12□□□□□ -0.47
PTPRR-205ENST00000537619 MON2Q7Z3U7 1717 aa12.12□□□□□ -0.47
PTPRR-205ENST00000537619 MS4A1P11836 297 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 TMPOP42166 694 aaKnown RBP12.11□□□□□ -0.47
PTPRR-205ENST00000537619 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 NUDT16Q96DE0 195 aaKnown RBP12.11□□□□□ -0.47
PTPRR-205ENST00000537619 PTPRUQ92729 1446 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-205ENST00000537619 LRRC7Q96NW7 1537 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 PDE4AP27815 886 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 CENPQQ7L2Z9 268 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-205ENST00000537619 NME9Q86XW9 330 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 PLEKHG1Q9ULL1 1385 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 C3P01024 1663 aa12.11□□□□□ -0.47
PTPRR-205ENST00000537619 DIAPH1O60610 1272 aaKnown RBP12.1□□□□□ -0.47
PTPRR-205ENST00000537619 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
PTPRR-205ENST00000537619 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
PTPRR-205ENST00000537619 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
PTPRR-205ENST00000537619 TSR2Q969E8 191 aaKnown RBP12.09□□□□□ -0.47
PTPRR-205ENST00000537619 RLBP1P12271 317 aa12.09□□□□□ -0.47
PTPRR-205ENST00000537619 BCL2L13Q9BXK5 485 aa12.09□□□□□ -0.47
PTPRR-205ENST00000537619 EMILIN1Q9Y6C2 1016 aa12.09□□□□□ -0.47
PTPRR-205ENST00000537619 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
PTPRR-205ENST00000537619 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
PTPRR-205ENST00000537619 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.48
PTPRR-205ENST00000537619 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
PTPRR-205ENST00000537619 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
PTPRR-205ENST00000537619 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
PTPRR-205ENST00000537619 MAP2P11137 1827 aaKnown RBP12.07□□□□□ -0.48
PTPRR-205ENST00000537619 SLIT1O75093 1534 aa12.07□□□□□ -0.48
PTPRR-205ENST00000537619 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
PTPRR-205ENST00000537619 IGHDP01880 384 aa12.07□□□□□ -0.48
PTPRR-205ENST00000537619 FRAT1Q92837 279 aaPredicted RBP12.07□□□□□ -0.48
PTPRR-205ENST00000537619 MYH16Q9H6N6 1097 aa12.07□□□□□ -0.48
PTPRR-205ENST00000537619 MAPK8IP3Q9UPT6 1336 aa12.06□□□□□ -0.48
PTPRR-205ENST00000537619 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
PTPRR-205ENST00000537619 ITSN1Q15811 1721 aa12.06□□□□□ -0.48
PTPRR-205ENST00000537619 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
PTPRR-205ENST00000537619 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
PTPRR-205ENST00000537619 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
PTPRR-205ENST00000537619 SLC26A8Q96RN1 970 aa12.05□□□□□ -0.48
PTPRR-205ENST00000537619 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
PTPRR-205ENST00000537619 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
PTPRR-205ENST00000537619 IL13P35225 146 aa12.05□□□□□ -0.48
PTPRR-205ENST00000537619 RIPK4P57078 832 aa12.05□□□□□ -0.48
PTPRR-205ENST00000537619 EXOSC9Q06265 439 aaKnown RBP12.05□□□□□ -0.48
PTPRR-205ENST00000537619 FCHSD2O94868 740 aa12.04□□□□□ -0.48
PTPRR-205ENST00000537619 CLUAP1Q96AJ1 413 aa12.04□□□□□ -0.48
PTPRR-205ENST00000537619 IL16Q14005 1332 aa12.04□□□□□ -0.48
PTPRR-205ENST00000537619 HMOX1P09601 288 aa12.03□□□□□ -0.48
PTPRR-205ENST00000537619 ANP32AP39687 249 aaKnown RBP12.03□□□□□ -0.48
PTPRR-205ENST00000537619 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
PTPRR-205ENST00000537619 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
PTPRR-205ENST00000537619 PHACTR3Q96KR7 559 aa12.03□□□□□ -0.48
PTPRR-205ENST00000537619 IPO9Q96P70 1041 aaKnown RBP12.03□□□□□ -0.48
PTPRR-205ENST00000537619 NOP58Q9Y2X3 529 aaKnown RBP12.03□□□□□ -0.48
PTPRR-205ENST00000537619 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
PTPRR-205ENST00000537619 NPM2Q86SE8 214 aaKnown RBP12.02□□□□□ -0.49
PTPRR-205ENST00000537619 COG3Q96JB2 828 aa12.02□□□□□ -0.49
PTPRR-205ENST00000537619 OVOS2A0A0J9YW53 1432 aa12.02□□□□□ -0.49
PTPRR-205ENST00000537619 OVOS2Q6IE36 1432 aa12.02□□□□□ -0.49
PTPRR-205ENST00000537619 C8orf34Q49A92 452 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 PCDHB15Q9Y5E8 787 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 ACEP12821 1306 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
PTPRR-205ENST00000537619 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 SSH1Q8WYL5 1049 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 USP6P35125 1406 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 SSH2Q76I76 1423 aa12.01□□□□□ -0.49
PTPRR-205ENST00000537619 PLEKHG3A1L390 1219 aa12□□□□□ -0.49
PTPRR-205ENST00000537619 RGS3P49796 1198 aa12□□□□□ -0.49
PTPRR-205ENST00000537619 NFE2L2Q16236 605 aa12□□□□□ -0.49
PTPRR-205ENST00000537619 THUMPD2Q9BTF0 503 aaKnown RBP12□□□□□ -0.49
PTPRR-205ENST00000537619 AMOTL2Q9Y2J4 779 aa12□□□□□ -0.49
PTPRR-205ENST00000537619 PEAK1Q9H792 1746 aa12□□□□□ -0.49
PTPRR-205ENST00000537619 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
PTPRR-205ENST00000537619 PNNQ9H307 717 aaKnown RBP11.99□□□□□ -0.49
PTPRR-205ENST00000537619 EID1Q9Y6B2 187 aa11.99□□□□□ -0.49
PTPRR-205ENST00000537619 NALCNQ8IZF0 1738 aa11.99□□□□□ -0.49
PTPRR-205ENST00000537619 XRN1Q8IZH2 1706 aaKnown RBP11.99□□□□□ -0.49
PTPRR-205ENST00000537619 SMC4Q9NTJ3 1288 aa11.99□□□□□ -0.49
PTPRR-205ENST00000537619 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
PTPRR-205ENST00000537619 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
PTPRR-205ENST00000537619 TRIM27P14373 513 aa11.98□□□□□ -0.49
PTPRR-205ENST00000537619 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms