RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
SNX17-210ENST00000537606 ANKRD26Q9UPS8 1709 aa22.84■■□□□ 1.25
SNX17-210ENST00000537606 ARHGAP23Q9P227 1491 aa22.83■■□□□ 1.25
SNX17-210ENST00000537606 KIF20BQ96Q89 1820 aa22.83■■□□□ 1.25
SNX17-210ENST00000537606 SLIT1O75093 1534 aa22.83■■□□□ 1.25
SNX17-210ENST00000537606 POLKQ9UBT6 870 aa22.83■■□□□ 1.25
SNX17-210ENST00000537606 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.83■■□□□ 1.24
SNX17-210ENST00000537606 IQSEC2Q5JU85 1478 aa22.82■■□□□ 1.24
SNX17-210ENST00000537606 DIAPH1O60610 1272 aaKnown RBP22.82■■□□□ 1.24
SNX17-210ENST00000537606 TBX22Q9Y458 520 aa22.82■■□□□ 1.24
SNX17-210ENST00000537606 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
SNX17-210ENST00000537606 EDC4Q6P2E9 1401 aaKnown RBP22.81■■□□□ 1.24
SNX17-210ENST00000537606 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
SNX17-210ENST00000537606 BCAR3O75815 825 aa22.81■■□□□ 1.24
SNX17-210ENST00000537606 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
SNX17-210ENST00000537606 PLEKHF1Q96S99 279 aa22.79■■□□□ 1.24
SNX17-210ENST00000537606 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
SNX17-210ENST00000537606 CDC42BPGQ6DT37 1551 aa22.77■■□□□ 1.24
SNX17-210ENST00000537606 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
SNX17-210ENST00000537606 ACEP12821 1306 aa22.77■■□□□ 1.24
SNX17-210ENST00000537606 RIMS1Q86UR5 1692 aaKnown RBP22.76■■□□□ 1.23
SNX17-210ENST00000537606 RRS1Q15050 365 aaKnown RBP22.76■■□□□ 1.23
SNX17-210ENST00000537606 COG3Q96JB2 828 aa22.76■■□□□ 1.23
SNX17-210ENST00000537606 ZNF692Q9BU19 519 aaPredicted RBP22.76■■□□□ 1.23
SNX17-210ENST00000537606 MSH5O43196 834 aa22.75■■□□□ 1.23
SNX17-210ENST00000537606 WDR63Q8IWG1 891 aa22.74■■□□□ 1.23
SNX17-210ENST00000537606 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
SNX17-210ENST00000537606 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
SNX17-210ENST00000537606 MAP2P11137 1827 aaKnown RBP22.74■■□□□ 1.23
SNX17-210ENST00000537606 KCNA6P17658 529 aa22.73■■□□□ 1.23
SNX17-210ENST00000537606 TMPOP42166 694 aaKnown RBP22.73■■□□□ 1.23
SNX17-210ENST00000537606 CCDC27Q2M243 656 aa22.73■■□□□ 1.23
SNX17-210ENST00000537606 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.72■■□□□ 1.23
SNX17-210ENST00000537606 HMOX1P09601 288 aa22.72■■□□□ 1.23
SNX17-210ENST00000537606 CEP170BQ9Y4F5 1589 aaPredicted RBP22.72■■□□□ 1.23
SNX17-210ENST00000537606 TTC21BQ7Z4L5 1316 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 MON2Q7Z3U7 1717 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 ADGRB2O60241 1585 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 PLEKHG3A1L390 1219 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 FANCIQ9NVI1 1328 aa22.7■■□□□ 1.22
SNX17-210ENST00000537606 RBM33Q96EV2 1170 aaKnown RBP22.69■■□□□ 1.22
SNX17-210ENST00000537606 ITSN1Q15811 1721 aa22.69■■□□□ 1.22
SNX17-210ENST00000537606 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
SNX17-210ENST00000537606 RIPK4P57078 832 aa22.69■■□□□ 1.22
SNX17-210ENST00000537606 AKAP12Q02952 1782 aa22.68■■□□□ 1.22
SNX17-210ENST00000537606 SOX12O15370 315 aa22.68■■□□□ 1.22
SNX17-210ENST00000537606 TSR2Q969E8 191 aaKnown RBP22.68■■□□□ 1.22
SNX17-210ENST00000537606 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
SNX17-210ENST00000537606 SKAP1Q86WV1 359 aa22.67■■□□□ 1.22
SNX17-210ENST00000537606 FCHSD2O94868 740 aa22.67■■□□□ 1.22
SNX17-210ENST00000537606 ANKLE2Q86XL3 938 aa22.67■■□□□ 1.22
SNX17-210ENST00000537606 BCL2L13Q9BXK5 485 aa22.67■■□□□ 1.22
SNX17-210ENST00000537606 PTCH1Q13635 1447 aa22.67■■□□□ 1.22
SNX17-210ENST00000537606 IL13P35225 146 aa22.66■■□□□ 1.22
SNX17-210ENST00000537606 RSPH6AQ9H0K4 717 aa22.66■■□□□ 1.22
SNX17-210ENST00000537606 FRAT1Q92837 279 aaPredicted RBP22.66■■□□□ 1.22
SNX17-210ENST00000537606 PHACTR3Q96KR7 559 aa22.65■■□□□ 1.22
SNX17-210ENST00000537606 MYH16Q9H6N6 1097 aa22.65■■□□□ 1.22
SNX17-210ENST00000537606 NGDNQ8NEJ9 315 aaKnown RBP22.65■■□□□ 1.22
SNX17-210ENST00000537606 AATKQ6ZMQ8 1374 aa22.64■■□□□ 1.22
SNX17-210ENST00000537606 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
SNX17-210ENST00000537606 RARSP54136 660 aaKnown RBP22.64■■□□□ 1.21
SNX17-210ENST00000537606 USP6P35125 1406 aa22.64■■□□□ 1.21
SNX17-210ENST00000537606 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
SNX17-210ENST00000537606 TOPAZ1Q8N9V7 1692 aa22.62■■□□□ 1.21
SNX17-210ENST00000537606 NCBP3Q53F19 620 aaKnown RBP22.62■■□□□ 1.21
SNX17-210ENST00000537606 ANP32EQ9BTT0 268 aa22.62■■□□□ 1.21
SNX17-210ENST00000537606 DIP2AQ14689 1571 aa22.62■■□□□ 1.21
SNX17-210ENST00000537606 LRRC7Q96NW7 1537 aa22.62■■□□□ 1.21
SNX17-210ENST00000537606 RGPD8O14715 1765 aaPredicted RBP22.61■■□□□ 1.21
SNX17-210ENST00000537606 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
SNX17-210ENST00000537606 NEFMP07197 916 aa22.6■■□□□ 1.21
SNX17-210ENST00000537606 CDK12Q9NYV4 1490 aaPredicted RBP22.59■■□□□ 1.21
SNX17-210ENST00000537606 ADAMTSL3P82987 1691 aa22.59■■□□□ 1.21
SNX17-210ENST00000537606 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
SNX17-210ENST00000537606 EXOSC9Q06265 439 aaKnown RBP22.59■■□□□ 1.21
SNX17-210ENST00000537606 TNNQ9UQP3 1299 aa22.58■■□□□ 1.21
SNX17-210ENST00000537606 COG6Q9Y2V7 657 aa22.58■■□□□ 1.2
SNX17-210ENST00000537606 THUMPD2Q9BTF0 503 aaKnown RBP22.57■■□□□ 1.2
SNX17-210ENST00000537606 NRKQ7Z2Y5 1582 aa22.57■■□□□ 1.2
SNX17-210ENST00000537606 OVOS2A0A0J9YW53 1432 aa22.56■■□□□ 1.2
SNX17-210ENST00000537606 OVOS2Q6IE36 1432 aa22.56■■□□□ 1.2
SNX17-210ENST00000537606 LAS1LQ9Y4W2 734 aaKnown RBP22.56■■□□□ 1.2
SNX17-210ENST00000537606 HSP90AB2PQ58FF8 381 aa22.56■■□□□ 1.2
SNX17-210ENST00000537606 PIK3R4Q99570 1358 aa22.55■■□□□ 1.2
SNX17-210ENST00000537606 SSH2Q76I76 1423 aa22.55■■□□□ 1.2
SNX17-210ENST00000537606 NUTM2GQ5VZR2 741 aa22.55■■□□□ 1.2
SNX17-210ENST00000537606 EIF4A2Q14240 407 aaKnown RBP22.55■■□□□ 1.2
SNX17-210ENST00000537606 PDE3AQ14432 1141 aa22.54■■□□□ 1.2
SNX17-210ENST00000537606 NFE2L2Q16236 605 aa22.54■■□□□ 1.2
SNX17-210ENST00000537606 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
SNX17-210ENST00000537606 CLUAP1Q96AJ1 413 aa22.54■■□□□ 1.2
SNX17-210ENST00000537606 SETD1BQ9UPS6 1966 aaKnown RBP22.53■■□□□ 1.2
SNX17-210ENST00000537606 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
SNX17-210ENST00000537606 RLBP1P12271 317 aa22.52■■□□□ 1.2
SNX17-210ENST00000537606 KDM2BQ8NHM5 1336 aa22.51■■□□□ 1.19
SNX17-210ENST00000537606 SULT6B1Q6IMI4 303 aa22.51■■□□□ 1.19
SNX17-210ENST00000537606 IL16Q14005 1332 aa22.51■■□□□ 1.19
SNX17-210ENST00000537606 TTC21AQ8NDW8 1320 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms