RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
CCDC170-202ENST00000537358 VPS72Q15906 364 aa14.2□□□□□ -0.14
CCDC170-202ENST00000537358 GLI3P10071 1580 aa14.2□□□□□ -0.14
CCDC170-202ENST00000537358 PRR36Q9H6K5 1346 aa14.19□□□□□ -0.14
CCDC170-202ENST00000537358 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
CCDC170-202ENST00000537358 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
CCDC170-202ENST00000537358 A0A0G2JS52 829 aa14.18□□□□□ -0.14
CCDC170-202ENST00000537358 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
CCDC170-202ENST00000537358 MYT1Q01538 1121 aa14.18□□□□□ -0.14
CCDC170-202ENST00000537358 SF3B2Q13435 895 aaKnown RBP14.18□□□□□ -0.14
CCDC170-202ENST00000537358 ATP7BP35670 1465 aa14.18□□□□□ -0.14
CCDC170-202ENST00000537358 BRWD3Q6RI45 1802 aa14.18□□□□□ -0.14
CCDC170-202ENST00000537358 FAM83GA6ND36 823 aa14.17□□□□□ -0.14
CCDC170-202ENST00000537358 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
CCDC170-202ENST00000537358 CDK19Q9BWU1 502 aa14.17□□□□□ -0.14
CCDC170-202ENST00000537358 BTG4Q9NY30 223 aa14.16□□□□□ -0.14
CCDC170-202ENST00000537358 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
CCDC170-202ENST00000537358 EP400Q96L91 3159 aa14.16□□□□□ -0.14
CCDC170-202ENST00000537358 PRDM11Q9NQV5 511 aa14.15□□□□□ -0.14
CCDC170-202ENST00000537358 CCDC61Q9Y6R9 512 aa14.15□□□□□ -0.14
CCDC170-202ENST00000537358 NRAPQ86VF7 1730 aa14.15□□□□□ -0.14
CCDC170-202ENST00000537358 BLMP54132 1417 aaPredicted RBP14.15□□□□□ -0.14
CCDC170-202ENST00000537358 SRPK2P78362 688 aaKnown RBP14.14□□□□□ -0.15
CCDC170-202ENST00000537358 KRT27Q7Z3Y8 459 aa14.14□□□□□ -0.15
CCDC170-202ENST00000537358 CENPJQ9HC77 1338 aaPredicted RBP14.14□□□□□ -0.15
CCDC170-202ENST00000537358 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
CCDC170-202ENST00000537358 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
CCDC170-202ENST00000537358 ACEP12821 1306 aa14.13□□□□□ -0.15
CCDC170-202ENST00000537358 CRYBG1Q9Y4K1 1723 aa14.12□□□□□ -0.15
CCDC170-202ENST00000537358 POLR3AO14802 1390 aaPredicted RBP14.12□□□□□ -0.15
CCDC170-202ENST00000537358 ONECUT3O60422 494 aaPredicted RBP14.12□□□□□ -0.15
CCDC170-202ENST00000537358 QRICH2Q9H0J4 1663 aa14.11□□□□□ -0.15
CCDC170-202ENST00000537358 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
CCDC170-202ENST00000537358 FAM98CQ17RN3 349 aaKnown RBP14.11□□□□□ -0.15
CCDC170-202ENST00000537358 NBPF8Q3BBV2 869 aa14.11□□□□□ -0.15
CCDC170-202ENST00000537358 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
CCDC170-202ENST00000537358 ABTB2Q8N961 1025 aa14.1□□□□□ -0.15
CCDC170-202ENST00000537358 PPIP5K1Q6PFW1 1433 aa14.09□□□□□ -0.15
CCDC170-202ENST00000537358 NUTM2GQ5VZR2 741 aa14.09□□□□□ -0.15
CCDC170-202ENST00000537358 L3MBTL2Q969R5 705 aa14.09□□□□□ -0.15
CCDC170-202ENST00000537358 KIAA0232Q92628 1395 aa14.09□□□□□ -0.15
CCDC170-202ENST00000537358 ZC3H6P61129 1189 aaKnown RBP14.08□□□□□ -0.16
CCDC170-202ENST00000537358 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
CCDC170-202ENST00000537358 SPATA31A5Q5VU36 1347 aa14.08□□□□□ -0.16
CCDC170-202ENST00000537358 SPATA31A7Q8IWB4 1347 aa14.08□□□□□ -0.16
CCDC170-202ENST00000537358 BRD4O60885 1362 aaPredicted RBP14.08□□□□□ -0.16
CCDC170-202ENST00000537358 BAG6P46379 1132 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 EVA1CP58658 441 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 NLRP13Q86W25 1043 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 STRN4Q9NRL3 753 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 TRPM1Q7Z4N2 1603 aa14.07□□□□□ -0.16
CCDC170-202ENST00000537358 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
CCDC170-202ENST00000537358 EVC2Q86UK5 1308 aa14.06□□□□□ -0.16
CCDC170-202ENST00000537358 ROCK2O75116 1388 aaKnown RBP14.06□□□□□ -0.16
CCDC170-202ENST00000537358 SIN3AQ96ST3 1273 aa14.05□□□□□ -0.16
CCDC170-202ENST00000537358 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
CCDC170-202ENST00000537358 DEFB132Q7Z7B7 95 aa14.04□□□□□ -0.16
CCDC170-202ENST00000537358 NRKQ7Z2Y5 1582 aa14.04□□□□□ -0.16
CCDC170-202ENST00000537358 SPATA31A1Q5TZJ5 1347 aa14.03□□□□□ -0.16
CCDC170-202ENST00000537358 THSD7AQ9UPZ6 1657 aa14.03□□□□□ -0.16
CCDC170-202ENST00000537358 CPDO75976 1380 aa14.02□□□□□ -0.17
CCDC170-202ENST00000537358 USP19O94966 1318 aa14.02□□□□□ -0.17
CCDC170-202ENST00000537358 CABP1Q9NZU7 370 aa14.02□□□□□ -0.17
CCDC170-202ENST00000537358 USP35Q9P2H5 1018 aa14.02□□□□□ -0.17
CCDC170-202ENST00000537358 SSH2Q76I76 1423 aa14.01□□□□□ -0.17
CCDC170-202ENST00000537358 GCP02774 474 aa14.01□□□□□ -0.17
CCDC170-202ENST00000537358 USP6P35125 1406 aa14□□□□□ -0.17
CCDC170-202ENST00000537358 NLRP6P59044 892 aa14□□□□□ -0.17
CCDC170-202ENST00000537358 PDE3BQ13370 1112 aa14□□□□□ -0.17
CCDC170-202ENST00000537358 FAM196AQ6ZSG2 479 aa14□□□□□ -0.17
CCDC170-202ENST00000537358 ZNF692Q9BU19 519 aaPredicted RBP14□□□□□ -0.17
CCDC170-202ENST00000537358 ZBTB7CA1YPR0 619 aa13.99□□□□□ -0.17
CCDC170-202ENST00000537358 BARGINQ6ZT62 677 aa13.99□□□□□ -0.17
CCDC170-202ENST00000537358 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
CCDC170-202ENST00000537358 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
CCDC170-202ENST00000537358 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
CCDC170-202ENST00000537358 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
CCDC170-202ENST00000537358 FAM182BQ5T319 152 aa13.98□□□□□ -0.17
CCDC170-202ENST00000537358 THRAP3Q9Y2W1 955 aaKnown RBP13.98□□□□□ -0.17
CCDC170-202ENST00000537358 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
CCDC170-202ENST00000537358 AKAP12Q02952 1782 aa13.97□□□□□ -0.17
CCDC170-202ENST00000537358 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
CCDC170-202ENST00000537358 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
CCDC170-202ENST00000537358 C11orf95C9JLR9 678 aaPredicted RBP13.96□□□□□ -0.17
CCDC170-202ENST00000537358 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.17
CCDC170-202ENST00000537358 TNS1Q9HBL0 1735 aaKnown RBP13.95□□□□□ -0.18
CCDC170-202ENST00000537358 SLIT3O75094 1523 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 PIK3C2AO00443 1686 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 COL5A2P05997 1499 aaPredicted RBP13.95□□□□□ -0.18
CCDC170-202ENST00000537358 EN1Q05925 392 aaPredicted RBP13.95□□□□□ -0.18
CCDC170-202ENST00000537358 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 CRB1P82279 1406 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 AATKQ6ZMQ8 1374 aa13.95□□□□□ -0.18
CCDC170-202ENST00000537358 DISP2A7MBM2 1401 aa13.94□□□□□ -0.18
CCDC170-202ENST00000537358 TRIM37O94972 964 aa13.94□□□□□ -0.18
CCDC170-202ENST00000537358 KTN1Q86UP2 1357 aaKnown RBP13.94□□□□□ -0.18
CCDC170-202ENST00000537358 TTC21BQ7Z4L5 1316 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms