RNA–Protein interactions for RNA: ENST00000537297.2

USP15-204, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-204ENST00000537297 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
USP15-204ENST00000537297 C14orf93Q9H972 538 aaKnown RBP15.63■□□□□ 0.09
USP15-204ENST00000537297 DHX57Q6P158 1386 aaKnown RBP15.62■□□□□ 0.09
USP15-204ENST00000537297 POGKQ9P215 609 aa15.62■□□□□ 0.09
USP15-204ENST00000537297 MYOM2P54296 1465 aa15.62■□□□□ 0.09
USP15-204ENST00000537297 HAP1P54257 671 aaPredicted RBP15.61■□□□□ 0.09
USP15-204ENST00000537297 KRT28Q7Z3Y7 464 aa15.61■□□□□ 0.09
USP15-204ENST00000537297 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
USP15-204ENST00000537297 RGPD8O14715 1765 aaPredicted RBP15.61■□□□□ 0.09
USP15-204ENST00000537297 GLI3P10071 1580 aa15.61■□□□□ 0.09
USP15-204ENST00000537297 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
USP15-204ENST00000537297 HRCP23327 699 aa15.6■□□□□ 0.09
USP15-204ENST00000537297 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
USP15-204ENST00000537297 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
USP15-204ENST00000537297 PHF8Q9UPP1 1060 aa15.59■□□□□ 0.09
USP15-204ENST00000537297 TRAK1Q9UPV9 953 aa15.59■□□□□ 0.09
USP15-204ENST00000537297 NRXN1Q9ULB1 1477 aa15.59■□□□□ 0.09
USP15-204ENST00000537297 KIF1AQ12756 1690 aa15.58■□□□□ 0.08
USP15-204ENST00000537297 DCAF11Q8TEB1 546 aa15.58■□□□□ 0.08
USP15-204ENST00000537297 SPATA31A3Q5VYP0 1347 aa15.58■□□□□ 0.08
USP15-204ENST00000537297 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
USP15-204ENST00000537297 FKBP8Q14318 412 aa15.57■□□□□ 0.08
USP15-204ENST00000537297 MINK1Q8N4C8 1332 aaPredicted RBP15.57■□□□□ 0.08
USP15-204ENST00000537297 EVX2Q03828 476 aa15.56■□□□□ 0.08
USP15-204ENST00000537297 ACIN1Q9UKV3 1341 aaKnown RBP15.56■□□□□ 0.08
USP15-204ENST00000537297 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
USP15-204ENST00000537297 PSME1Q06323 249 aa15.55■□□□□ 0.08
USP15-204ENST00000537297 SP7Q8TDD2 431 aaPredicted RBP15.55■□□□□ 0.08
USP15-204ENST00000537297 CREBZFQ9NS37 354 aa15.55■□□□□ 0.08
USP15-204ENST00000537297 TNS3Q68CZ2 1445 aa15.54■□□□□ 0.08
USP15-204ENST00000537297 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
USP15-204ENST00000537297 YY1P25490 414 aa15.53■□□□□ 0.08
USP15-204ENST00000537297 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
USP15-204ENST00000537297 USP32Q8NFA0 1604 aa15.53■□□□□ 0.08
USP15-204ENST00000537297 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
USP15-204ENST00000537297 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
USP15-204ENST00000537297 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
USP15-204ENST00000537297 UNC5CLQ8IV45 518 aa15.51■□□□□ 0.07
USP15-204ENST00000537297 SEPT12Q8IYM1 358 aa15.51■□□□□ 0.07
USP15-204ENST00000537297 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
USP15-204ENST00000537297 SLIT2O94813 1529 aa15.5■□□□□ 0.07
USP15-204ENST00000537297 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
USP15-204ENST00000537297 A0A0G2JS52 829 aa15.48■□□□□ 0.07
USP15-204ENST00000537297 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
USP15-204ENST00000537297 MYT1Q01538 1121 aa15.48■□□□□ 0.07
USP15-204ENST00000537297 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
USP15-204ENST00000537297 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
USP15-204ENST00000537297 ADGRB2O60241 1585 aa15.47■□□□□ 0.07
USP15-204ENST00000537297 BAG6P46379 1132 aa15.47■□□□□ 0.07
USP15-204ENST00000537297 R3HDM1Q15032 1099 aaKnown RBP15.47■□□□□ 0.07
USP15-204ENST00000537297 ANKARQ7Z5J8 1434 aa15.47■□□□□ 0.07
USP15-204ENST00000537297 NGDNQ8NEJ9 315 aaKnown RBP15.47■□□□□ 0.07
USP15-204ENST00000537297 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
USP15-204ENST00000537297 ARHGEF10O15013 1369 aa15.47■□□□□ 0.07
USP15-204ENST00000537297 WASLO00401 505 aaPredicted RBP15.46■□□□□ 0.07
USP15-204ENST00000537297 KRT27Q7Z3Y8 459 aa15.46■□□□□ 0.07
USP15-204ENST00000537297 GPRASP1Q5JY77 1395 aa15.46■□□□□ 0.07
USP15-204ENST00000537297 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
USP15-204ENST00000537297 FAM83GA6ND36 823 aa15.44■□□□□ 0.06
USP15-204ENST00000537297 EN1Q05925 392 aaPredicted RBP15.44■□□□□ 0.06
USP15-204ENST00000537297 RGPD1P0DJD0 1748 aa15.43■□□□□ 0.06
USP15-204ENST00000537297 ARHGEF28Q8N1W1 1705 aaKnown RBP15.43■□□□□ 0.06
USP15-204ENST00000537297 TRPM3Q9HCF6 1732 aaPredicted RBP15.43■□□□□ 0.06
USP15-204ENST00000537297 ONECUT3O60422 494 aaPredicted RBP15.43■□□□□ 0.06
USP15-204ENST00000537297 NUTM2GQ5VZR2 741 aa15.43■□□□□ 0.06
USP15-204ENST00000537297 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
USP15-204ENST00000537297 VPS72Q15906 364 aa15.42■□□□□ 0.06
USP15-204ENST00000537297 BTG4Q9NY30 223 aa15.42■□□□□ 0.06
USP15-204ENST00000537297 NUDT16Q96DE0 195 aaKnown RBP15.41■□□□□ 0.06
USP15-204ENST00000537297 NWD2Q9ULI1 1742 aa15.4■□□□□ 0.06
USP15-204ENST00000537297 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
USP15-204ENST00000537297 CDK19Q9BWU1 502 aa15.4■□□□□ 0.06
USP15-204ENST00000537297 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
USP15-204ENST00000537297 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
USP15-204ENST00000537297 TNS1Q9HBL0 1735 aaKnown RBP15.39■□□□□ 0.05
USP15-204ENST00000537297 ATP7BP35670 1465 aa15.39■□□□□ 0.05
USP15-204ENST00000537297 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
USP15-204ENST00000537297 PRDM11Q9NQV5 511 aa15.38■□□□□ 0.05
USP15-204ENST00000537297 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
USP15-204ENST00000537297 CHRNA2Q15822 529 aa15.37■□□□□ 0.05
USP15-204ENST00000537297 FAM182BQ5T319 152 aa15.37■□□□□ 0.05
USP15-204ENST00000537297 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
USP15-204ENST00000537297 NRAPQ86VF7 1730 aa15.37■□□□□ 0.05
USP15-204ENST00000537297 ZC3H6P61129 1189 aaKnown RBP15.36■□□□□ 0.05
USP15-204ENST00000537297 EZH2Q15910 746 aaKnown RBP15.36■□□□□ 0.05
USP15-204ENST00000537297 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
USP15-204ENST00000537297 STRN4Q9NRL3 753 aa15.35■□□□□ 0.05
USP15-204ENST00000537297 ACEP12821 1306 aa15.35■□□□□ 0.05
USP15-204ENST00000537297 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
USP15-204ENST00000537297 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
USP15-204ENST00000537297 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
USP15-204ENST00000537297 KIAA0232Q92628 1395 aa15.34■□□□□ 0.05
USP15-204ENST00000537297 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
USP15-204ENST00000537297 CD44P16070 742 aaKnown RBP15.33■□□□□ 0.04
USP15-204ENST00000537297 ZBTB7CA1YPR0 619 aa15.32■□□□□ 0.04
USP15-204ENST00000537297 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
USP15-204ENST00000537297 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
USP15-204ENST00000537297 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
USP15-204ENST00000537297 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
USP15-204ENST00000537297 PHRF1Q9P1Y6 1649 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms