RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
CPSF7-217ENST00000537162 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
CPSF7-217ENST00000537162 SBNO1A3KN83 1393 aa15□□□□□ -0.01
CPSF7-217ENST00000537162 GPR162Q16538 588 aa15□□□□□ -0.01
CPSF7-217ENST00000537162 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
CPSF7-217ENST00000537162 GOLGB1Q14789 3259 aaKnown RBP14.99□□□□□ -0.01
CPSF7-217ENST00000537162 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
CPSF7-217ENST00000537162 TECPR2O15040 1411 aa14.99□□□□□ -0.01
CPSF7-217ENST00000537162 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
CPSF7-217ENST00000537162 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
CPSF7-217ENST00000537162 PSME1Q06323 249 aa14.97□□□□□ -0.01
CPSF7-217ENST00000537162 PTF1AQ7RTS3 328 aa14.97□□□□□ -0.01
CPSF7-217ENST00000537162 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
CPSF7-217ENST00000537162 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
CPSF7-217ENST00000537162 PROM2Q8N271 834 aa14.96□□□□□ -0.01
CPSF7-217ENST00000537162 PHF8Q9UPP1 1060 aa14.96□□□□□ -0.01
CPSF7-217ENST00000537162 SBF2Q86WG5 1849 aa14.96□□□□□ -0.01
CPSF7-217ENST00000537162 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
CPSF7-217ENST00000537162 PRELPP51888 382 aa14.95□□□□□ -0.02
CPSF7-217ENST00000537162 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
CPSF7-217ENST00000537162 ALS2Q96Q42 1657 aa14.95□□□□□ -0.02
CPSF7-217ENST00000537162 NRXN1Q9ULB1 1477 aa14.95□□□□□ -0.02
CPSF7-217ENST00000537162 ATP10DQ9P241 1426 aa14.94□□□□□ -0.02
CPSF7-217ENST00000537162 ARXQ96QS3 562 aa14.94□□□□□ -0.02
CPSF7-217ENST00000537162 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
CPSF7-217ENST00000537162 MAP3K5Q99683 1374 aa14.94□□□□□ -0.02
CPSF7-217ENST00000537162 PEAK1Q9H792 1746 aa14.94□□□□□ -0.02
CPSF7-217ENST00000537162 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
CPSF7-217ENST00000537162 STRN4Q9NRL3 753 aa14.93□□□□□ -0.02
CPSF7-217ENST00000537162 KIF1BO60333 1816 aa14.92□□□□□ -0.02
CPSF7-217ENST00000537162 PLSCR1O15162 318 aa14.92□□□□□ -0.02
CPSF7-217ENST00000537162 DNAJC5GQ8N7S2 189 aa14.92□□□□□ -0.02
CPSF7-217ENST00000537162 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
CPSF7-217ENST00000537162 STK26Q9P289 416 aa14.92□□□□□ -0.02
CPSF7-217ENST00000537162 CHRNA2Q15822 529 aa14.91□□□□□ -0.02
CPSF7-217ENST00000537162 NUP155O75694 1391 aa14.9□□□□□ -0.02
CPSF7-217ENST00000537162 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
CPSF7-217ENST00000537162 BARGINQ6ZT62 677 aa14.89□□□□□ -0.03
CPSF7-217ENST00000537162 VPS8Q8N3P4 1428 aa14.89□□□□□ -0.03
CPSF7-217ENST00000537162 VGFO15240 615 aaPredicted RBP14.88□□□□□ -0.03
CPSF7-217ENST00000537162 TNS4Q8IZW8 715 aa14.88□□□□□ -0.03
CPSF7-217ENST00000537162 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
CPSF7-217ENST00000537162 PPLO60437 1756 aa14.88□□□□□ -0.03
CPSF7-217ENST00000537162 PARP4Q9UKK3 1724 aaKnown RBP14.87□□□□□ -0.03
CPSF7-217ENST00000537162 SLC15A2Q16348 729 aa14.87□□□□□ -0.03
CPSF7-217ENST00000537162 ZNF526Q8TF50 670 aaPredicted RBP14.87□□□□□ -0.03
CPSF7-217ENST00000537162 KIAA0232Q92628 1395 aa14.86□□□□□ -0.03
CPSF7-217ENST00000537162 KNDC1Q76NI1 1749 aa14.86□□□□□ -0.03
CPSF7-217ENST00000537162 YBX3P16989 372 aaKnown RBP eCLIP14.86□□□□□ -0.033e-7■■□□□ 12.8
CPSF7-217ENST00000537162 GPBP1L1Q9HC44 474 aaPredicted RBP14.86□□□□□ -0.03
CPSF7-217ENST00000537162 STK32BQ9NY57 414 aa14.86□□□□□ -0.03
CPSF7-217ENST00000537162 KLHL34Q8N239 644 aa14.85□□□□□ -0.03
CPSF7-217ENST00000537162 NLGN2Q8NFZ4 835 aa14.85□□□□□ -0.03
CPSF7-217ENST00000537162 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
CPSF7-217ENST00000537162 LARP1Q6PKG0 1096 aaKnown RBP14.83□□□□□ -0.04
CPSF7-217ENST00000537162 PHRF1Q9P1Y6 1649 aaKnown RBP14.83□□□□□ -0.04
CPSF7-217ENST00000537162 TMEM132EQ6IEE7 984 aa14.82□□□□□ -0.04
CPSF7-217ENST00000537162 OVOS2A0A0G2JMS6 1433 aa14.82□□□□□ -0.04
CPSF7-217ENST00000537162 OVOS2A0A0J9YW53 1432 aa14.82□□□□□ -0.04
CPSF7-217ENST00000537162 OVOS2Q6IE36 1432 aa14.82□□□□□ -0.04
CPSF7-217ENST00000537162 APLP1P51693 650 aa14.81□□□□□ -0.04
CPSF7-217ENST00000537162 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
CPSF7-217ENST00000537162 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
CPSF7-217ENST00000537162 TCP11L2Q8N4U5 519 aa14.81□□□□□ -0.04
CPSF7-217ENST00000537162 ADCY9O60503 1353 aa14.81□□□□□ -0.04
CPSF7-217ENST00000537162 LRRC37A3O60309 1634 aa14.81□□□□□ -0.04
CPSF7-217ENST00000537162 ABCC11Q96J66 1382 aa14.8□□□□□ -0.04
CPSF7-217ENST00000537162 KIF3CO14782 793 aa14.79□□□□□ -0.04
CPSF7-217ENST00000537162 ATP7BP35670 1465 aa14.79□□□□□ -0.04
CPSF7-217ENST00000537162 ZC3H6P61129 1189 aaKnown RBP14.79□□□□□ -0.04
CPSF7-217ENST00000537162 PCDH10Q9P2E7 1040 aa14.79□□□□□ -0.04
CPSF7-217ENST00000537162 COL24A1Q17RW2 1714 aa14.78□□□□□ -0.04
CPSF7-217ENST00000537162 PAPPAQ13219 1627 aa14.78□□□□□ -0.04
CPSF7-217ENST00000537162 ADGRF5Q8IZF2 1346 aa14.78□□□□□ -0.04
CPSF7-217ENST00000537162 EVA1CP58658 441 aa14.78□□□□□ -0.04
CPSF7-217ENST00000537162 WDR90Q96KV7 1748 aa14.78□□□□□ -0.04
CPSF7-217ENST00000537162 LMO7Q8WWI1 1683 aa14.77□□□□□ -0.05
CPSF7-217ENST00000537162 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
CPSF7-217ENST00000537162 HTRA3P83110 453 aa14.76□□□□□ -0.05
CPSF7-217ENST00000537162 TOPAZ1Q8N9V7 1692 aa14.76□□□□□ -0.05
CPSF7-217ENST00000537162 RPGRIP1LQ68CZ1 1315 aa14.74□□□□□ -0.05
CPSF7-217ENST00000537162 GRIN3BO60391 1043 aa14.74□□□□□ -0.05
CPSF7-217ENST00000537162 PAK3O75914 559 aaPredicted RBP14.74□□□□□ -0.05
CPSF7-217ENST00000537162 C11orf95C9JLR9 678 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-217ENST00000537162 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
CPSF7-217ENST00000537162 ZNF827Q17R98 1081 aa14.73□□□□□ -0.05
CPSF7-217ENST00000537162 JMYQ8N9B5 988 aa14.73□□□□□ -0.05
CPSF7-217ENST00000537162 YTHDC2Q9H6S0 1430 aaKnown RBP14.73□□□□□ -0.05
CPSF7-217ENST00000537162 GPRASP1Q5JY77 1395 aa14.73□□□□□ -0.05
CPSF7-217ENST00000537162 DHX57Q6P158 1386 aaKnown RBP14.73□□□□□ -0.05
CPSF7-217ENST00000537162 MARCH10Q8NA82 808 aaPredicted RBP14.72□□□□□ -0.05
CPSF7-217ENST00000537162 THRAP3Q9Y2W1 955 aaKnown RBP14.72□□□□□ -0.05
CPSF7-217ENST00000537162 AKAP12Q02952 1782 aa14.72□□□□□ -0.05
CPSF7-217ENST00000537162 PCNTO95613 3336 aa14.72□□□□□ -0.05
CPSF7-217ENST00000537162 NUTM2GQ5VZR2 741 aa14.71□□□□□ -0.05
CPSF7-217ENST00000537162 WWC3Q9ULE0 1092 aa14.71□□□□□ -0.05
CPSF7-217ENST00000537162 ANKARQ7Z5J8 1434 aa14.71□□□□□ -0.05
CPSF7-217ENST00000537162 PRR36Q9H6K5 1346 aa14.7□□□□□ -0.06
CPSF7-217ENST00000537162 KLRG1Q96E93 195 aa14.7□□□□□ -0.06
CPSF7-217ENST00000537162 ROCK1Q13464 1354 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms