RNA–Protein interactions for RNA: ENST00000537064.5

POLE-210, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 1 (best)

Gene POLE, Length 8,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-210	ENST00000537064	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.88	□□□□□ -0.35
POLE-210	ENST00000537064	PSMA5	P28066	241 aa		12.88	□□□□□ -0.35
POLE-210	ENST00000537064	TNPO1	Q92973	898 aa	Known RBP	12.88	□□□□□ -0.35
POLE-210	ENST00000537064	NUP160	Q12769	1436 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	ZMYM4	Q5VZL5	1548 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	AK7	Q96M32	723 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	UVSSA	Q2YD98	709 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	BICD2	Q8TD16	824 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	TRAK1	Q9UPV9	953 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	ARHGAP5	Q13017	1502 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	CCDC73	Q6ZRK6	1079 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	ERCC4	Q92889	916 aa	Predicted RBP	12.87	□□□□□ -0.35
POLE-210	ENST00000537064	HSP90B2P	Q58FF3	399 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	SRCIN1	Q9C0H9	1055 aa		12.87	□□□□□ -0.35
POLE-210	ENST00000537064	PTPRG	P23470	1445 aa		12.86	□□□□□ -0.35
POLE-210	ENST00000537064	ALDH1L2	Q3SY69	923 aa		12.86	□□□□□ -0.35
POLE-210	ENST00000537064	NEK4	P51957	841 aa		12.86	□□□□□ -0.35
POLE-210	ENST00000537064	TRIM5	Q9C035	493 aa		12.86	□□□□□ -0.35
POLE-210	ENST00000537064	RARS	P54136	660 aa	Known RBP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	ASXL1	Q8IXJ9	1541 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	TSR1	Q2NL82	804 aa	Known RBP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	BMP2KL	Q5H9B9	411 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	GTPBP4	Q9BZE4	634 aa	Known RBP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	CGN	Q9P2M7	1197 aa	Known RBP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	MTHFS	P49914	203 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	C20orf194	Q5TEA3	1177 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	STK26	Q9P289	416 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	CALCOCO1	Q9P1Z2	691 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	NOB1	Q9ULX3	412 aa	Known RBP	12.85	□□□□□ -0.35
POLE-210	ENST00000537064	HIP1	O00291	1037 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	CREBRF	Q8IUR6	639 aa		12.85	□□□□□ -0.35
POLE-210	ENST00000537064	OFD1	O75665	1012 aa		12.84	□□□□□ -0.35
POLE-210	ENST00000537064	CDK13	Q14004	1512 aa	Known RBP	12.84	□□□□□ -0.35
POLE-210	ENST00000537064	BICRA	Q9NZM4	1560 aa		12.84	□□□□□ -0.35
POLE-210	ENST00000537064	HDAC1	Q13547	482 aa	Predicted RBP	12.83	□□□□□ -0.35
POLE-210	ENST00000537064	KRI1	Q8N9T8	703 aa	Known RBP	12.83	□□□□□ -0.36
POLE-210	ENST00000537064	COG3	Q96JB2	828 aa		12.83	□□□□□ -0.36
POLE-210	ENST00000537064	GNAI3	P08754	354 aa		12.83	□□□□□ -0.36
POLE-210	ENST00000537064	CCDC183	Q5T5S1	534 aa		12.83	□□□□□ -0.36
POLE-210	ENST00000537064	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.83	□□□□□ -0.36
POLE-210	ENST00000537064	ANKRD1	Q15327	319 aa		12.83	□□□□□ -0.36
POLE-210	ENST00000537064	CNTROB	Q8N137	903 aa		12.83	□□□□□ -0.36
POLE-210	ENST00000537064	EXOSC9	Q06265	439 aa	Known RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	VPS37C	A5D8V6	355 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	RBM25	P49756	843 aa	Known RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	LEKR1	Q6ZMV7	388 aa		12.82	□□□□□ -0.36
POLE-210	ENST00000537064	ADGB	Q8N7X0	1667 aa		12.82	□□□□□ -0.36
POLE-210	ENST00000537064	NBPF1	Q3BBV0	1214 aa		12.82	□□□□□ -0.36
POLE-210	ENST00000537064	NSD2	O96028	1365 aa		12.82	□□□□□ -0.36
POLE-210	ENST00000537064	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	NEMF	O60524	1076 aa		12.82	□□□□□ -0.36
POLE-210	ENST00000537064	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-210	ENST00000537064	CAVIN2	O95810	425 aa		12.81	□□□□□ -0.36
POLE-210	ENST00000537064	DNMT1	P26358	1616 aa	Known RBP	12.81	□□□□□ -0.36
POLE-210	ENST00000537064	CPLX2	Q6PUV4	134 aa	Known RBP	12.81	□□□□□ -0.36
POLE-210	ENST00000537064	ANKRD20A12P	Q8NF67	263 aa		12.81	□□□□□ -0.36
POLE-210	ENST00000537064	KRT85	P78386	507 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	PATL2	C9JE40	543 aa	Known RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	SYCE3	A1L190	88 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	RPAP2	Q8IXW5	612 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	SMC5	Q8IY18	1101 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	PIK3C2G	O75747	1445 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	KDM2B	Q8NHM5	1336 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	POLR1A	O95602	1720 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	KIN	O60870	393 aa	Known RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	GGT6	Q6P531	493 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	SCAF11	Q99590	1463 aa	Known RBP	12.8	□□□□□ -0.36
POLE-210	ENST00000537064	STK11IP	Q8N1F8	1099 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	UHRF1BP1	Q6BDS2	1440 aa		12.8	□□□□□ -0.36
POLE-210	ENST00000537064	ZKSCAN5	Q9Y2L8	839 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	BLM	P54132	1417 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-210	ENST00000537064	BAG4	O95429	457 aa	Known RBP	12.79	□□□□□ -0.36
POLE-210	ENST00000537064	KIAA0586	Q9BVV6	1533 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	FAM135A	Q9P2D6	1515 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	IL16	Q14005	1332 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	ABCA5	Q8WWZ7	1642 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	CCT4	P50991	539 aa	Known RBP	12.79	□□□□□ -0.36
POLE-210	ENST00000537064	CCDC94	Q9BW85	323 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-210	ENST00000537064	IPO7	O95373	1038 aa	Known RBP	12.79	□□□□□ -0.36
POLE-210	ENST00000537064	PAXBP1	Q9Y5B6	917 aa		12.79	□□□□□ -0.36
POLE-210	ENST00000537064	LRSAM1	Q6UWE0	723 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	CCAR2	Q8N163	923 aa	Known RBP	12.78	□□□□□ -0.36
POLE-210	ENST00000537064	EIF3J	O75822	258 aa	Known RBP	12.78	□□□□□ -0.36
POLE-210	ENST00000537064	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
POLE-210	ENST00000537064	USP8	P40818	1118 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	RAB3GAP1	Q15042	981 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	PTPRK	Q15262	1439 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	LAMC3	Q9Y6N6	1575 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	IFIT2	P09913	472 aa	Known RBP	12.78	□□□□□ -0.36
POLE-210	ENST00000537064	TEX14	Q8IWB6	1497 aa		12.78	□□□□□ -0.36
POLE-210	ENST00000537064	ZNF396	Q96N95	335 aa	Predicted RBP	12.77	□□□□□ -0.36
POLE-210	ENST00000537064	TNMD	Q9H2S6	317 aa		12.77	□□□□□ -0.36
POLE-210	ENST00000537064	CCDC27	Q2M243	656 aa		12.77	□□□□□ -0.37
POLE-210	ENST00000537064	ELL2	O00472	640 aa	Predicted RBP	12.77	□□□□□ -0.37
POLE-210	ENST00000537064	SNAPC4	Q5SXM2	1469 aa		12.76	□□□□□ -0.37
POLE-210	ENST00000537064	GNAI2	P04899	355 aa		12.76	□□□□□ -0.37
POLE-210	ENST00000537064	KIF20A	O95235	890 aa		12.76	□□□□□ -0.37

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