RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
YBX3-206ENST00000536823 MTUS2Q5JR59 1369 aa11.24□□□□□ -0.61
YBX3-206ENST00000536823 EHBP1L1Q8N3D4 1523 aa11.24□□□□□ -0.61
YBX3-206ENST00000536823 LOC105371045A0A1W2PR82 267 aa11.23□□□□□ -0.61
YBX3-206ENST00000536823 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
YBX3-206ENST00000536823 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
YBX3-206ENST00000536823 ANKLE1Q8NAG6 615 aa11.22□□□□□ -0.61
YBX3-206ENST00000536823 ITSN2Q9NZM3 1697 aa11.22□□□□□ -0.61
YBX3-206ENST00000536823 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.22□□□□□ -0.61
YBX3-206ENST00000536823 HECW2Q9P2P5 1572 aa11.21□□□□□ -0.61
YBX3-206ENST00000536823 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
YBX3-206ENST00000536823 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
YBX3-206ENST00000536823 TLL1O43897 1013 aa11.21□□□□□ -0.61
YBX3-206ENST00000536823 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
YBX3-206ENST00000536823 SIGLEC1Q9BZZ2 1709 aa11.21□□□□□ -0.62
YBX3-206ENST00000536823 MADDQ8WXG6 1647 aa11.2□□□□□ -0.62
YBX3-206ENST00000536823 ARHGEF12Q9NZN5 1544 aa11.2□□□□□ -0.62
YBX3-206ENST00000536823 ARID4BQ4LE39 1312 aaPredicted RBP11.2□□□□□ -0.62
YBX3-206ENST00000536823 GDF9O60383 454 aa11.2□□□□□ -0.62
YBX3-206ENST00000536823 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
YBX3-206ENST00000536823 SAMD9LQ8IVG5 1584 aa11.2□□□□□ -0.62
YBX3-206ENST00000536823 ATP10AO60312 1499 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 TRAPPC8Q9Y2L5 1435 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 CCNB3Q8WWL7 1395 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
YBX3-206ENST00000536823 LIAT1Q6ZQX7 453 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 AAASQ9NRG9 546 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 SYCP2Q9BX26 1530 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 PTPRMP28827 1452 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 MLH3Q9UHC1 1453 aa11.19□□□□□ -0.62
YBX3-206ENST00000536823 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
YBX3-206ENST00000536823 DIP2CQ9Y2E4 1556 aa11.18□□□□□ -0.62
YBX3-206ENST00000536823 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
YBX3-206ENST00000536823 ABCA6Q8N139 1617 aa11.17□□□□□ -0.62
YBX3-206ENST00000536823 REREQ9P2R6 1566 aa11.17□□□□□ -0.62
YBX3-206ENST00000536823 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
YBX3-206ENST00000536823 TTC13Q8NBP0 860 aa11.17□□□□□ -0.62
YBX3-206ENST00000536823 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
YBX3-206ENST00000536823 S1PR4O95977 384 aa11.16□□□□□ -0.62
YBX3-206ENST00000536823 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
YBX3-206ENST00000536823 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
YBX3-206ENST00000536823 OSBPP22059 807 aa11.15□□□□□ -0.62
YBX3-206ENST00000536823 CFDP1Q9UEE9 299 aaPredicted RBP11.15□□□□□ -0.62
YBX3-206ENST00000536823 KIDINS220Q9ULH0 1771 aa11.15□□□□□ -0.62
YBX3-206ENST00000536823 MAP3K1Q13233 1512 aa11.14□□□□□ -0.63
YBX3-206ENST00000536823 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
YBX3-206ENST00000536823 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
YBX3-206ENST00000536823 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
YBX3-206ENST00000536823 LRRC9Q6ZRR7 1453 aa11.13□□□□□ -0.63
YBX3-206ENST00000536823 WFS1O76024 890 aa11.13□□□□□ -0.63
YBX3-206ENST00000536823 AGLP35573 1532 aa11.13□□□□□ -0.63
YBX3-206ENST00000536823 INO80Q9ULG1 1556 aaPredicted RBP11.12□□□□□ -0.63
YBX3-206ENST00000536823 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
YBX3-206ENST00000536823 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
YBX3-206ENST00000536823 HNRNPMP52272 730 aaKnown RBP eCLIP11.11□□□□□ -0.63
YBX3-206ENST00000536823 SPAG9O60271 1321 aaKnown RBP11.1□□□□□ -0.63
YBX3-206ENST00000536823 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
YBX3-206ENST00000536823 MLECQ14165 292 aa11.1□□□□□ -0.63
YBX3-206ENST00000536823 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
YBX3-206ENST00000536823 SPRYD3Q8NCJ5 442 aa11.1□□□□□ -0.63
YBX3-206ENST00000536823 EYA1Q99502 592 aa11.1□□□□□ -0.63
YBX3-206ENST00000536823 MBD5Q9P267 1494 aa11.1□□□□□ -0.63
YBX3-206ENST00000536823 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
YBX3-206ENST00000536823 CAMSAP2Q08AD1 1489 aa11.09□□□□□ -0.63
YBX3-206ENST00000536823 PLXNC1O60486 1568 aa11.08□□□□□ -0.64
YBX3-206ENST00000536823 NPDC1Q9NQX5 325 aaPredicted RBP11.08□□□□□ -0.64
YBX3-206ENST00000536823 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
YBX3-206ENST00000536823 ADH1BP00325 375 aa11.07□□□□□ -0.64
YBX3-206ENST00000536823 E2F4Q16254 413 aa11.07□□□□□ -0.64
YBX3-206ENST00000536823 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
YBX3-206ENST00000536823 CRIPAKQ8N1N5 446 aa11.07□□□□□ -0.64
YBX3-206ENST00000536823 FOXC1Q12948 553 aa11.06□□□□□ -0.64
YBX3-206ENST00000536823 PLA2G2CQ5R387 149 aa11.06□□□□□ -0.64
YBX3-206ENST00000536823 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
YBX3-206ENST00000536823 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
YBX3-206ENST00000536823 A2MP01023 1474 aa11.06□□□□□ -0.64
YBX3-206ENST00000536823 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
YBX3-206ENST00000536823 RTEL1-TNFRSF6BF6WH68 1400 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 ACTN4O43707 911 aaKnown RBP11.05□□□□□ -0.64
YBX3-206ENST00000536823 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
YBX3-206ENST00000536823 ARHGEF5Q12774 1597 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 MYOM3Q5VTT5 1437 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 VSIG10Q8N0Z9 540 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 CFAP44Q96MT7 982 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 DACH1Q9UI36 760 aa11.05□□□□□ -0.64
YBX3-206ENST00000536823 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
YBX3-206ENST00000536823 C11orf95C9JLR9 678 aaPredicted RBP11.04□□□□□ -0.64
YBX3-206ENST00000536823 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
YBX3-206ENST00000536823 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
YBX3-206ENST00000536823 PKD2L1Q9P0L9 805 aa11.04□□□□□ -0.64
YBX3-206ENST00000536823 GMPR2Q9P2T1 348 aaKnown RBP11.04□□□□□ -0.64
YBX3-206ENST00000536823 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
YBX3-206ENST00000536823 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
YBX3-206ENST00000536823 WIPF1O43516 503 aa11.03□□□□□ -0.64
YBX3-206ENST00000536823 NFX1Q12986 1120 aaKnown RBP11.03□□□□□ -0.64
YBX3-206ENST00000536823 DNAJB2P25686 324 aa11.02□□□□□ -0.65
YBX3-206ENST00000536823 C3P01024 1663 aa11.01□□□□□ -0.65
YBX3-206ENST00000536823 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
YBX3-206ENST00000536823 AXIN1O15169 862 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms