RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-206	ENST00000536823	PRR14	Q9BWN1	585 aa		11.24	□□□□□ -0.61
YBX3-206	ENST00000536823	MTUS2	Q5JR59	1369 aa		11.24	□□□□□ -0.61
YBX3-206	ENST00000536823	EHBP1L1	Q8N3D4	1523 aa		11.24	□□□□□ -0.61
YBX3-206	ENST00000536823	LOC105371045	A0A1W2PR82	267 aa		11.23	□□□□□ -0.61
YBX3-206	ENST00000536823	TNFRSF10A	O00220	468 aa		11.22	□□□□□ -0.61
YBX3-206	ENST00000536823	VPS8	Q8N3P4	1428 aa		11.22	□□□□□ -0.61
YBX3-206	ENST00000536823	ANKLE1	Q8NAG6	615 aa		11.22	□□□□□ -0.61
YBX3-206	ENST00000536823	ITSN2	Q9NZM3	1697 aa		11.22	□□□□□ -0.61
YBX3-206	ENST00000536823	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.22	□□□□□ -0.61
YBX3-206	ENST00000536823	HECW2	Q9P2P5	1572 aa		11.21	□□□□□ -0.61
YBX3-206	ENST00000536823	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.21	□□□□□ -0.61
YBX3-206	ENST00000536823	ST8SIA5	O15466	376 aa		11.21	□□□□□ -0.61
YBX3-206	ENST00000536823	TLL1	O43897	1013 aa		11.21	□□□□□ -0.61
YBX3-206	ENST00000536823	BLOC1S3	Q6QNY0	202 aa		11.21	□□□□□ -0.61
YBX3-206	ENST00000536823	SIGLEC1	Q9BZZ2	1709 aa		11.21	□□□□□ -0.62
YBX3-206	ENST00000536823	MADD	Q8WXG6	1647 aa		11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	ARHGEF12	Q9NZN5	1544 aa		11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	GDF9	O60383	454 aa		11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	TIAM1	Q13009	1591 aa		11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	SAMD9L	Q8IVG5	1584 aa		11.2	□□□□□ -0.62
YBX3-206	ENST00000536823	ATP10A	O60312	1499 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	C9orf84	Q5VXU9	1444 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	TRAPPC8	Q9Y2L5	1435 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	CCNB3	Q8WWL7	1395 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	PPEF1	O14829	653 aa	Predicted RBP	11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	LIAT1	Q6ZQX7	453 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	AAAS	Q9NRG9	546 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	SYCP2	Q9BX26	1530 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	PTPRM	P28827	1452 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	MLH3	Q9UHC1	1453 aa		11.19	□□□□□ -0.62
YBX3-206	ENST00000536823	AFAP1	Q8N556	730 aa		11.18	□□□□□ -0.62
YBX3-206	ENST00000536823	DIP2C	Q9Y2E4	1556 aa		11.18	□□□□□ -0.62
YBX3-206	ENST00000536823	PLEKHH2	Q8IVE3	1493 aa		11.18	□□□□□ -0.62
YBX3-206	ENST00000536823	ABCA6	Q8N139	1617 aa		11.17	□□□□□ -0.62
YBX3-206	ENST00000536823	RERE	Q9P2R6	1566 aa		11.17	□□□□□ -0.62
YBX3-206	ENST00000536823	PADI6	Q6TGC4	694 aa		11.17	□□□□□ -0.62
YBX3-206	ENST00000536823	TTC13	Q8NBP0	860 aa		11.17	□□□□□ -0.62
YBX3-206	ENST00000536823	KIAA1107	Q9UPP5	1409 aa		11.17	□□□□□ -0.62
YBX3-206	ENST00000536823	S1PR4	O95977	384 aa		11.16	□□□□□ -0.62
YBX3-206	ENST00000536823	RIMS1	Q86UR5	1692 aa	Known RBP	11.16	□□□□□ -0.62
YBX3-206	ENST00000536823	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.15	□□□□□ -0.62
YBX3-206	ENST00000536823	OSBP	P22059	807 aa		11.15	□□□□□ -0.62
YBX3-206	ENST00000536823	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.15	□□□□□ -0.62
YBX3-206	ENST00000536823	KIDINS220	Q9ULH0	1771 aa		11.15	□□□□□ -0.62
YBX3-206	ENST00000536823	MAP3K1	Q13233	1512 aa		11.14	□□□□□ -0.63
YBX3-206	ENST00000536823	NCOA2	Q15596	1464 aa		11.14	□□□□□ -0.63
YBX3-206	ENST00000536823	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.14	□□□□□ -0.63
YBX3-206	ENST00000536823	FER1L4	A9Z1Z3	1794 aa		11.13	□□□□□ -0.63
YBX3-206	ENST00000536823	LRRC9	Q6ZRR7	1453 aa		11.13	□□□□□ -0.63
YBX3-206	ENST00000536823	WFS1	O76024	890 aa		11.13	□□□□□ -0.63
YBX3-206	ENST00000536823	AGL	P35573	1532 aa		11.13	□□□□□ -0.63
YBX3-206	ENST00000536823	INO80	Q9ULG1	1556 aa	Predicted RBP	11.12	□□□□□ -0.63
YBX3-206	ENST00000536823	STK17A	Q9UEE5	414 aa		11.12	□□□□□ -0.63
YBX3-206	ENST00000536823	ATP7A	Q04656	1500 aa		11.11	□□□□□ -0.63
YBX3-206	ENST00000536823	HNRNPM	P52272	730 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
YBX3-206	ENST00000536823	SPAG9	O60271	1321 aa	Known RBP	11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	HAP1	P54257	671 aa	Predicted RBP	11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	MLEC	Q14165	292 aa		11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	SPRYD3	Q8NCJ5	442 aa		11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	EYA1	Q99502	592 aa		11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	MBD5	Q9P267	1494 aa		11.1	□□□□□ -0.63
YBX3-206	ENST00000536823	ZNF644	Q9H582	1327 aa	Predicted RBP	11.09	□□□□□ -0.63
YBX3-206	ENST00000536823	CAMSAP2	Q08AD1	1489 aa		11.09	□□□□□ -0.63
YBX3-206	ENST00000536823	PLXNC1	O60486	1568 aa		11.08	□□□□□ -0.64
YBX3-206	ENST00000536823	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.08	□□□□□ -0.64
YBX3-206	ENST00000536823	CCDC141	Q6ZP82	1450 aa		11.07	□□□□□ -0.64
YBX3-206	ENST00000536823	ADH1B	P00325	375 aa		11.07	□□□□□ -0.64
YBX3-206	ENST00000536823	E2F4	Q16254	413 aa		11.07	□□□□□ -0.64
YBX3-206	ENST00000536823	KMT5B	Q4FZB7	885 aa		11.07	□□□□□ -0.64
YBX3-206	ENST00000536823	CRIPAK	Q8N1N5	446 aa		11.07	□□□□□ -0.64
YBX3-206	ENST00000536823	FOXC1	Q12948	553 aa		11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	PLA2G2C	Q5R387	149 aa		11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	KANK4	Q5T7N3	995 aa	Predicted RBP	11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	A2M	P01023	1474 aa		11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	LMTK3	Q96Q04	1460 aa		11.06	□□□□□ -0.64
YBX3-206	ENST00000536823	RTEL1-TNFRSF6B	F6WH68	1400 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	ACTN4	O43707	911 aa	Known RBP	11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	INSM1	Q01101	510 aa	Predicted RBP	11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	ARHGEF5	Q12774	1597 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	MYOM3	Q5VTT5	1437 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	VSIG10	Q8N0Z9	540 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	CFAP44	Q96MT7	982 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	DACH1	Q9UI36	760 aa		11.05	□□□□□ -0.64
YBX3-206	ENST00000536823	ADGB	Q8N7X0	1667 aa		11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	C11orf95	C9JLR9	678 aa	Predicted RBP	11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	LMOD2	Q6P5Q4	547 aa		11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	SLC6A16	Q9GZN6	736 aa		11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	PKD2L1	Q9P0L9	805 aa		11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	GMPR2	Q9P2T1	348 aa	Known RBP	11.04	□□□□□ -0.64
YBX3-206	ENST00000536823	MIA2	Q96PC5	1412 aa		11.03	□□□□□ -0.64
YBX3-206	ENST00000536823	CNTLN	Q9NXG0	1405 aa		11.03	□□□□□ -0.64
YBX3-206	ENST00000536823	WIPF1	O43516	503 aa		11.03	□□□□□ -0.64
YBX3-206	ENST00000536823	NFX1	Q12986	1120 aa	Known RBP	11.03	□□□□□ -0.64
YBX3-206	ENST00000536823	DNAJB2	P25686	324 aa		11.02	□□□□□ -0.65
YBX3-206	ENST00000536823	C3	P01024	1663 aa		11.01	□□□□□ -0.65
YBX3-206	ENST00000536823	SETD1B	Q9UPS6	1966 aa	Known RBP	11.01	□□□□□ -0.65
YBX3-206	ENST00000536823	AXIN1	O15169	862 aa		11.01	□□□□□ -0.65

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