RNA–Protein interactions for RNA: ENST00000536559.1

CCND1-203, Transcript of cyclin D1, humanhuman

TSL 3 BASIC

Gene CCND1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-203ENST00000536559 ACEP12821 1306 aa23.84■■□□□ 1.41
CCND1-203ENST00000536559 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
CCND1-203ENST00000536559 ALS2Q96Q42 1657 aa23.84■■□□□ 1.41
CCND1-203ENST00000536559 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
CCND1-203ENST00000536559 NBPF8Q3BBV2 869 aa23.84■■□□□ 1.41
CCND1-203ENST00000536559 A0A0G2JS52 829 aa23.83■■□□□ 1.41
CCND1-203ENST00000536559 MYT1Q01538 1121 aa23.83■■□□□ 1.41
CCND1-203ENST00000536559 PRDM11Q9NQV5 511 aa23.83■■□□□ 1.41
CCND1-203ENST00000536559 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CCND1-203ENST00000536559 SEPT12Q8IYM1 358 aa23.82■■□□□ 1.4
CCND1-203ENST00000536559 GLI3P10071 1580 aa23.81■■□□□ 1.4
CCND1-203ENST00000536559 POLR3AO14802 1390 aaPredicted RBP23.8■■□□□ 1.4
CCND1-203ENST00000536559 COL14A1Q05707 1796 aaKnown RBP23.79■■□□□ 1.4
CCND1-203ENST00000536559 ABTB2Q8N961 1025 aa23.79■■□□□ 1.4
CCND1-203ENST00000536559 CABP2Q9NPB3 220 aa23.79■■□□□ 1.4
CCND1-203ENST00000536559 ONECUT3O60422 494 aaPredicted RBP23.78■■□□□ 1.4
CCND1-203ENST00000536559 SF3B2Q13435 895 aaKnown RBP23.78■■□□□ 1.4
CCND1-203ENST00000536559 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
CCND1-203ENST00000536559 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
CCND1-203ENST00000536559 EVC2Q86UK5 1308 aa23.77■■□□□ 1.4
CCND1-203ENST00000536559 PPIP5K1Q6PFW1 1433 aa23.76■■□□□ 1.39
CCND1-203ENST00000536559 KRT27Q7Z3Y8 459 aa23.76■■□□□ 1.39
CCND1-203ENST00000536559 TOPAZ1Q8N9V7 1692 aa23.74■■□□□ 1.39
CCND1-203ENST00000536559 QRICH2Q9H0J4 1663 aa23.74■■□□□ 1.39
CCND1-203ENST00000536559 ZC3H6P61129 1189 aaKnown RBP23.74■■□□□ 1.39
CCND1-203ENST00000536559 FAM98CQ17RN3 349 aaKnown RBP23.74■■□□□ 1.39
CCND1-203ENST00000536559 NLRP13Q86W25 1043 aa23.74■■□□□ 1.39
CCND1-203ENST00000536559 EP400Q96L91 3159 aa23.73■■□□□ 1.39
CCND1-203ENST00000536559 ZRANB1Q9UGI0 708 aa23.73■■□□□ 1.39
CCND1-203ENST00000536559 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
CCND1-203ENST00000536559 EVA1CP58658 441 aa23.72■■□□□ 1.39
CCND1-203ENST00000536559 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
CCND1-203ENST00000536559 BRD4O60885 1362 aaPredicted RBP23.72■■□□□ 1.39
CCND1-203ENST00000536559 TRPM1Q7Z4N2 1603 aa23.71■■□□□ 1.39
CCND1-203ENST00000536559 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
CCND1-203ENST00000536559 SPATA31A5Q5VU36 1347 aa23.7■■□□□ 1.38
CCND1-203ENST00000536559 SPATA31A7Q8IWB4 1347 aa23.7■■□□□ 1.38
CCND1-203ENST00000536559 CHRNA2Q15822 529 aa23.7■■□□□ 1.38
CCND1-203ENST00000536559 STRN4Q9NRL3 753 aa23.7■■□□□ 1.38
CCND1-203ENST00000536559 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
CCND1-203ENST00000536559 NRAPQ86VF7 1730 aa23.69■■□□□ 1.38
CCND1-203ENST00000536559 CRYBG1Q9Y4K1 1723 aa23.68■■□□□ 1.38
CCND1-203ENST00000536559 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
CCND1-203ENST00000536559 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
CCND1-203ENST00000536559 ZNF692Q9BU19 519 aaPredicted RBP23.66■■□□□ 1.38
CCND1-203ENST00000536559 PHRF1Q9P1Y6 1649 aaKnown RBP23.66■■□□□ 1.38
CCND1-203ENST00000536559 NLRP6P59044 892 aa23.65■■□□□ 1.38
CCND1-203ENST00000536559 CARD11Q9BXL7 1154 aa23.65■■□□□ 1.38
CCND1-203ENST00000536559 GCP02774 474 aa23.64■■□□□ 1.37
CCND1-203ENST00000536559 SPATA31A1Q5TZJ5 1347 aa23.63■■□□□ 1.37
CCND1-203ENST00000536559 USP19O94966 1318 aa23.62■■□□□ 1.37
CCND1-203ENST00000536559 USP35Q9P2H5 1018 aa23.62■■□□□ 1.37
CCND1-203ENST00000536559 CPDO75976 1380 aa23.62■■□□□ 1.37
CCND1-203ENST00000536559 USP6P35125 1406 aa23.61■■□□□ 1.37
CCND1-203ENST00000536559 ZBTB7CA1YPR0 619 aa23.61■■□□□ 1.37
CCND1-203ENST00000536559 BAG6P46379 1132 aa23.6■■□□□ 1.37
CCND1-203ENST00000536559 DEFB132Q7Z7B7 95 aa23.59■■□□□ 1.37
CCND1-203ENST00000536559 NRKQ7Z2Y5 1582 aa23.57■■□□□ 1.36
CCND1-203ENST00000536559 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
CCND1-203ENST00000536559 PDE3BQ13370 1112 aa23.56■■□□□ 1.36
CCND1-203ENST00000536559 TCP11L2Q8N4U5 519 aa23.56■■□□□ 1.36
CCND1-203ENST00000536559 LARP1Q6PKG0 1096 aaKnown RBP23.55■■□□□ 1.36
CCND1-203ENST00000536559 BARGINQ6ZT62 677 aa23.55■■□□□ 1.36
CCND1-203ENST00000536559 KCNH5Q8NCM2 988 aa23.55■■□□□ 1.36
CCND1-203ENST00000536559 TTC21AQ8NDW8 1320 aa23.55■■□□□ 1.36
CCND1-203ENST00000536559 FAM196AQ6ZSG2 479 aa23.54■■□□□ 1.36
CCND1-203ENST00000536559 THRAP3Q9Y2W1 955 aaKnown RBP23.54■■□□□ 1.36
CCND1-203ENST00000536559 TTC21BQ7Z4L5 1316 aa23.54■■□□□ 1.36
CCND1-203ENST00000536559 SBNO2Q9Y2G9 1366 aa23.53■■□□□ 1.36
CCND1-203ENST00000536559 FAM182BQ5T319 152 aa23.53■■□□□ 1.36
CCND1-203ENST00000536559 CAMTA1Q9Y6Y1 1673 aa23.53■■□□□ 1.36
CCND1-203ENST00000536559 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
CCND1-203ENST00000536559 TMC1Q8TDI8 760 aa23.52■■□□□ 1.36
CCND1-203ENST00000536559 THSD7AQ9UPZ6 1657 aa23.51■■□□□ 1.35
CCND1-203ENST00000536559 SLC24A1O60721 1099 aa23.51■■□□□ 1.35
CCND1-203ENST00000536559 AATKQ6ZMQ8 1374 aa23.51■■□□□ 1.35
CCND1-203ENST00000536559 HDGFL2Q7Z4V5 671 aaPredicted RBP23.5■■□□□ 1.35
CCND1-203ENST00000536559 SOX12O15370 315 aa23.48■■□□□ 1.35
CCND1-203ENST00000536559 TOM1L2Q6ZVM7 507 aa23.48■■□□□ 1.35
CCND1-203ENST00000536559 LMO7Q8WWI1 1683 aa23.48■■□□□ 1.35
CCND1-203ENST00000536559 CPSF1Q10570 1443 aaKnown RBP23.47■■□□□ 1.35
CCND1-203ENST00000536559 COL5A2P05997 1499 aaPredicted RBP23.47■■□□□ 1.35
CCND1-203ENST00000536559 SLIT3O75094 1523 aa23.47■■□□□ 1.35
CCND1-203ENST00000536559 RGPD1P0DJD0 1748 aa23.47■■□□□ 1.35
CCND1-203ENST00000536559 AKAP12Q02952 1782 aa23.47■■□□□ 1.35
CCND1-203ENST00000536559 C11orf95C9JLR9 678 aaPredicted RBP23.46■■□□□ 1.35
CCND1-203ENST00000536559 PIK3C2AO00443 1686 aa23.46■■□□□ 1.35
CCND1-203ENST00000536559 CRB1P82279 1406 aa23.46■■□□□ 1.35
CCND1-203ENST00000536559 TERF2IPQ9NYB0 399 aa23.46■■□□□ 1.35
CCND1-203ENST00000536559 TRIM37O94972 964 aa23.45■■□□□ 1.34
CCND1-203ENST00000536559 EN1Q05925 392 aaPredicted RBP23.45■■□□□ 1.34
CCND1-203ENST00000536559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.45■■□□□ 1.34
CCND1-203ENST00000536559 PUS7Q96PZ0 661 aaKnown RBP23.45■■□□□ 1.34
CCND1-203ENST00000536559 CSB-PGBD3P0DP91 1061 aa23.44■■□□□ 1.34
CCND1-203ENST00000536559 ARHGEF25Q86VW2 580 aa23.43■■□□□ 1.34
CCND1-203ENST00000536559 APBA3O96018 575 aa23.42■■□□□ 1.34
CCND1-203ENST00000536559 WDR17Q8IZU2 1322 aa23.41■■□□□ 1.34
CCND1-203ENST00000536559 CDCA7Q9BWT1 371 aaPredicted RBP23.41■■□□□ 1.34
CCND1-203ENST00000536559 SLC12A5Q9H2X9 1139 aa23.41■■□□□ 1.34
CCND1-203ENST00000536559 SRCAPQ6ZRS2 3230 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms