RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 MAP3K4Q9Y6R4 1608 aa10.62□□□□□ -0.71
ABCA4-207ENST00000536513 FAM83GA6ND36 823 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 PIP4K2BP78356 416 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 GLIPR1L2Q4G1C9 344 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 FANCIQ9NVI1 1328 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 PPIP5K1Q6PFW1 1433 aa10.61□□□□□ -0.71
ABCA4-207ENST00000536513 A2ML1A8K2U0 1454 aa10.6□□□□□ -0.71
ABCA4-207ENST00000536513 C20orf194Q5TEA3 1177 aa10.6□□□□□ -0.71
ABCA4-207ENST00000536513 PRR36Q9H6K5 1346 aa10.6□□□□□ -0.71
ABCA4-207ENST00000536513 ATAD2Q6PL18 1390 aa10.6□□□□□ -0.71
ABCA4-207ENST00000536513 CHRNA2Q15822 529 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 RICTORQ6R327 1708 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 PARD3Q8TEW0 1356 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 PHF8Q9UPP1 1060 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 TRPM1Q7Z4N2 1603 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 CAMSAP1Q5T5Y3 1602 aa10.59□□□□□ -0.71
ABCA4-207ENST00000536513 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
ABCA4-207ENST00000536513 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 CRBNQ96SW2 442 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 COG6Q9Y2V7 657 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 APBB1O00213 710 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 POLKQ9UBT6 870 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 SYNMO15061 1565 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 KAT6BQ8WYB5 2073 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 PANK1Q8TE04 598 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 MROH2AA6NES4 1674 aa10.58□□□□□ -0.72
ABCA4-207ENST00000536513 MADDQ8WXG6 1647 aa10.57□□□□□ -0.72
ABCA4-207ENST00000536513 MCM10Q7L590 875 aa10.57□□□□□ -0.72
ABCA4-207ENST00000536513 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
ABCA4-207ENST00000536513 SMC4Q9NTJ3 1288 aa10.57□□□□□ -0.72
ABCA4-207ENST00000536513 EIF2AK4Q9P2K8 1649 aaKnown RBP10.57□□□□□ -0.72
ABCA4-207ENST00000536513 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
ABCA4-207ENST00000536513 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
ABCA4-207ENST00000536513 STRN4Q9NRL3 753 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 DHX37Q8IY37 1157 aaKnown RBP10.56□□□□□ -0.72
ABCA4-207ENST00000536513 ZNF330Q9Y3S2 320 aaPredicted RBP10.56□□□□□ -0.72
ABCA4-207ENST00000536513 GLI2P10070 1586 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
ABCA4-207ENST00000536513 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 UBE2Q2Q8WVN8 375 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 TBX22Q9Y458 520 aa10.56□□□□□ -0.72
ABCA4-207ENST00000536513 SETD1BQ9UPS6 1966 aaKnown RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
ABCA4-207ENST00000536513 TTC21BQ7Z4L5 1316 aa10.55□□□□□ -0.72
ABCA4-207ENST00000536513 RRP1P56182 461 aaKnown RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 EXOSC9Q06265 439 aaKnown RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 CCDC9Q9Y3X0 531 aaKnown RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 LRRC59Q96AG4 307 aaKnown RBP10.55□□□□□ -0.72
ABCA4-207ENST00000536513 TNNQ9UQP3 1299 aa10.55□□□□□ -0.72
ABCA4-207ENST00000536513 ARHGAP31Q2M1Z3 1444 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 KIF13AQ9H1H9 1805 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 NPM3O75607 178 aaKnown RBP10.54□□□□□ -0.72
ABCA4-207ENST00000536513 SIGLEC1Q9BZZ2 1709 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 NGEFQ8N5V2 710 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
ABCA4-207ENST00000536513 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
ABCA4-207ENST00000536513 ADGRB3O60242 1522 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 ASXL1Q8IXJ9 1541 aa10.54□□□□□ -0.72
ABCA4-207ENST00000536513 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
ABCA4-207ENST00000536513 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
ABCA4-207ENST00000536513 PIK3C2BO00750 1634 aa10.53□□□□□ -0.72
ABCA4-207ENST00000536513 EIF2S2P20042 333 aaKnown RBP10.53□□□□□ -0.72
ABCA4-207ENST00000536513 ITPRIPQ8IWB1 547 aa10.53□□□□□ -0.72
ABCA4-207ENST00000536513 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
ABCA4-207ENST00000536513 MYO5BQ9ULV0 1848 aa10.52□□□□□ -0.72
ABCA4-207ENST00000536513 MYOM2P54296 1465 aa10.52□□□□□ -0.73
ABCA4-207ENST00000536513 KRT28Q7Z3Y7 464 aa10.52□□□□□ -0.73
ABCA4-207ENST00000536513 ZNF335Q9H4Z2 1342 aaPredicted RBP10.52□□□□□ -0.73
ABCA4-207ENST00000536513 VWDEQ8N2E2 1590 aa10.52□□□□□ -0.73
ABCA4-207ENST00000536513 ABCC11Q96J66 1382 aa10.51□□□□□ -0.73
ABCA4-207ENST00000536513 DEPDC5O75140 1603 aa10.51□□□□□ -0.73
ABCA4-207ENST00000536513 ALKQ9UM73 1620 aa10.51□□□□□ -0.73
ABCA4-207ENST00000536513 NEXMIFQ5QGS0 1516 aa10.51□□□□□ -0.73
ABCA4-207ENST00000536513 E9PSI1 815 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 IPO9Q96P70 1041 aaKnown RBP10.5□□□□□ -0.73
ABCA4-207ENST00000536513 ARHGEF40Q8TER5 1519 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 ADAMTS2O95450 1211 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 CHMP4AQ9BY43 222 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 LMTK2Q8IWU2 1503 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
ABCA4-207ENST00000536513 PREX1Q8TCU6 1659 aa10.49□□□□□ -0.73
ABCA4-207ENST00000536513 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
ABCA4-207ENST00000536513 MYH16Q9H6N6 1097 aa10.49□□□□□ -0.73
ABCA4-207ENST00000536513 DUSP27Q5VZP5 1158 aa10.49□□□□□ -0.73
ABCA4-207ENST00000536513 EVA1CP58658 441 aa10.49□□□□□ -0.73
ABCA4-207ENST00000536513 SYTL4Q96C24 671 aaPredicted RBP10.49□□□□□ -0.73
ABCA4-207ENST00000536513 PDE3BQ13370 1112 aa10.48□□□□□ -0.73
ABCA4-207ENST00000536513 C1orf115Q9H7X2 142 aa10.48□□□□□ -0.73
ABCA4-207ENST00000536513 SLFN5Q08AF3 891 aa10.48□□□□□ -0.73
ABCA4-207ENST00000536513 MPRIPQ6WCQ1 1025 aa10.47□□□□□ -0.73
ABCA4-207ENST00000536513 DDX54Q8TDD1 881 aaKnown RBP10.47□□□□□ -0.73
ABCA4-207ENST00000536513 PRDM11Q9NQV5 511 aa10.47□□□□□ -0.73
ABCA4-207ENST00000536513 KDM4FA0A1W2PPD8 638 aa10.47□□□□□ -0.73
ABCA4-207ENST00000536513 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms