RNA–Protein interactions for RNA: ENST00000536509.5

LMO3-214, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 550 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-214ENST00000536509 ALS2Q96Q42 1657 aa16.32■□□□□ 0.2
LMO3-214ENST00000536509 RAB3GAP2Q9H2M9 1393 aa16.32■□□□□ 0.2
LMO3-214ENST00000536509 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
LMO3-214ENST00000536509 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
LMO3-214ENST00000536509 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
LMO3-214ENST00000536509 KRT27Q7Z3Y8 459 aa16.3■□□□□ 0.2
LMO3-214ENST00000536509 PMFBP1Q8TBY8 1022 aa16.3■□□□□ 0.2
LMO3-214ENST00000536509 ITSN1Q15811 1721 aa16.3■□□□□ 0.2
LMO3-214ENST00000536509 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
LMO3-214ENST00000536509 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
LMO3-214ENST00000536509 FAM83GA6ND36 823 aa16.29■□□□□ 0.2
LMO3-214ENST00000536509 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
LMO3-214ENST00000536509 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.2
LMO3-214ENST00000536509 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
LMO3-214ENST00000536509 HRCP23327 699 aa16.26■□□□□ 0.19
LMO3-214ENST00000536509 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
LMO3-214ENST00000536509 CRYBG1Q9Y4K1 1723 aa16.25■□□□□ 0.19
LMO3-214ENST00000536509 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
LMO3-214ENST00000536509 PLEKHG5O94827 1062 aa16.25■□□□□ 0.19
LMO3-214ENST00000536509 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
LMO3-214ENST00000536509 BTG4Q9NY30 223 aa16.25■□□□□ 0.19
LMO3-214ENST00000536509 ARHGEF28Q8N1W1 1705 aaKnown RBP16.25■□□□□ 0.19
LMO3-214ENST00000536509 A0A0G2JS52 829 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 BAG6P46379 1132 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 MYT1Q01538 1121 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 POTEDQ86YR6 584 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 KDM2AQ9Y2K7 1162 aa16.24■□□□□ 0.19
LMO3-214ENST00000536509 PRR36Q9H6K5 1346 aa16.23■□□□□ 0.19
LMO3-214ENST00000536509 RGPD1P0DJD0 1748 aa16.23■□□□□ 0.19
LMO3-214ENST00000536509 LRP5O75197 1615 aa16.23■□□□□ 0.19
LMO3-214ENST00000536509 FAM98CQ17RN3 349 aaKnown RBP16.22■□□□□ 0.19
LMO3-214ENST00000536509 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
LMO3-214ENST00000536509 ATP7BP35670 1465 aa16.21■□□□□ 0.19
LMO3-214ENST00000536509 SPATA31A5Q5VU36 1347 aa16.2■□□□□ 0.18
LMO3-214ENST00000536509 SPATA31A7Q8IWB4 1347 aa16.2■□□□□ 0.18
LMO3-214ENST00000536509 KIAA1210Q9ULL0 1709 aa16.2■□□□□ 0.18
LMO3-214ENST00000536509 PRDM11Q9NQV5 511 aa16.2■□□□□ 0.18
LMO3-214ENST00000536509 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
LMO3-214ENST00000536509 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
LMO3-214ENST00000536509 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
LMO3-214ENST00000536509 TOPAZ1Q8N9V7 1692 aa16.17■□□□□ 0.18
LMO3-214ENST00000536509 POLR3AO14802 1390 aaPredicted RBP16.16■□□□□ 0.18
LMO3-214ENST00000536509 DISP2A7MBM2 1401 aa16.16■□□□□ 0.18
LMO3-214ENST00000536509 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
LMO3-214ENST00000536509 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
LMO3-214ENST00000536509 KIAA0232Q92628 1395 aa16.14■□□□□ 0.17
LMO3-214ENST00000536509 TNS1Q9HBL0 1735 aaKnown RBP16.14■□□□□ 0.17
LMO3-214ENST00000536509 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
LMO3-214ENST00000536509 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
LMO3-214ENST00000536509 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
LMO3-214ENST00000536509 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
LMO3-214ENST00000536509 ACEP12821 1306 aa16.12■□□□□ 0.17
LMO3-214ENST00000536509 EN1Q05925 392 aaPredicted RBP16.11■□□□□ 0.17
LMO3-214ENST00000536509 BARGINQ6ZT62 677 aa16.11■□□□□ 0.17
LMO3-214ENST00000536509 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
LMO3-214ENST00000536509 PARD3Q8TEW0 1356 aa16.11■□□□□ 0.17
LMO3-214ENST00000536509 EVA1CP58658 441 aa16.1■□□□□ 0.17
LMO3-214ENST00000536509 CPDO75976 1380 aa16.1■□□□□ 0.17
LMO3-214ENST00000536509 NRKQ7Z2Y5 1582 aa16.09■□□□□ 0.17
LMO3-214ENST00000536509 ZC3H6P61129 1189 aaKnown RBP16.09■□□□□ 0.17
LMO3-214ENST00000536509 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
LMO3-214ENST00000536509 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
LMO3-214ENST00000536509 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
LMO3-214ENST00000536509 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
LMO3-214ENST00000536509 C11orf95C9JLR9 678 aaPredicted RBP16.08■□□□□ 0.16
LMO3-214ENST00000536509 FAM182BQ5T319 152 aa16.08■□□□□ 0.16
LMO3-214ENST00000536509 NLRP13Q86W25 1043 aa16.08■□□□□ 0.16
LMO3-214ENST00000536509 SSH2Q76I76 1423 aa16.08■□□□□ 0.16
LMO3-214ENST00000536509 LMO7Q8WWI1 1683 aa16.08■□□□□ 0.16
LMO3-214ENST00000536509 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
LMO3-214ENST00000536509 THRAP3Q9Y2W1 955 aaKnown RBP16.07■□□□□ 0.16
LMO3-214ENST00000536509 USP19O94966 1318 aa16.07■□□□□ 0.16
LMO3-214ENST00000536509 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
LMO3-214ENST00000536509 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
LMO3-214ENST00000536509 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
LMO3-214ENST00000536509 PPIP5K1Q6PFW1 1433 aa16.05■□□□□ 0.16
LMO3-214ENST00000536509 CENPJQ9HC77 1338 aaPredicted RBP16.05■□□□□ 0.16
LMO3-214ENST00000536509 TRIM37O94972 964 aa16.05■□□□□ 0.16
LMO3-214ENST00000536509 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
LMO3-214ENST00000536509 TCP11L2Q8N4U5 519 aa16.05■□□□□ 0.16
LMO3-214ENST00000536509 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
LMO3-214ENST00000536509 R3HDM1Q15032 1099 aaKnown RBP16.04■□□□□ 0.16
LMO3-214ENST00000536509 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
LMO3-214ENST00000536509 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
LMO3-214ENST00000536509 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
LMO3-214ENST00000536509 PARP4Q9UKK3 1724 aaKnown RBP16.04■□□□□ 0.16
LMO3-214ENST00000536509 QRICH2Q9H0J4 1663 aa16.04■□□□□ 0.16
LMO3-214ENST00000536509 RREB1Q92766 1687 aa16.03■□□□□ 0.16
LMO3-214ENST00000536509 APBA3O96018 575 aa16.03■□□□□ 0.16
LMO3-214ENST00000536509 GCP02774 474 aa16.03■□□□□ 0.16
LMO3-214ENST00000536509 NBPF1Q3BBV0 1214 aa16.02■□□□□ 0.16
LMO3-214ENST00000536509 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.16
LMO3-214ENST00000536509 FKBP8Q14318 412 aa16.01■□□□□ 0.15
LMO3-214ENST00000536509 COL5A2P05997 1499 aaPredicted RBP16.01■□□□□ 0.15
LMO3-214ENST00000536509 CRB1P82279 1406 aa16■□□□□ 0.15
LMO3-214ENST00000536509 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
LMO3-214ENST00000536509 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
LMO3-214ENST00000536509 USP6P35125 1406 aa15.99■□□□□ 0.15
LMO3-214ENST00000536509 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms