RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
TNFRSF1A-208ENST00000536194 PHRF1Q9P1Y6 1649 aaKnown RBP15.88■□□□□ 0.13
TNFRSF1A-208ENST00000536194 TMF1P82094 1093 aa15.88■□□□□ 0.13
TNFRSF1A-208ENST00000536194 SLC12A5Q9H2X9 1139 aa15.88■□□□□ 0.13
TNFRSF1A-208ENST00000536194 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
TNFRSF1A-208ENST00000536194 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-208ENST00000536194 LMOD2Q6P5Q4 547 aa15.87■□□□□ 0.13
TNFRSF1A-208ENST00000536194 RGS17Q9UGC6 210 aaPredicted RBP15.87■□□□□ 0.13
TNFRSF1A-208ENST00000536194 CABLES1Q8TDN4 633 aa15.86■□□□□ 0.13
TNFRSF1A-208ENST00000536194 TMC1Q8TDI8 760 aa15.85■□□□□ 0.13
TNFRSF1A-208ENST00000536194 A0A1W2PP64 1363 aa15.85■□□□□ 0.13
TNFRSF1A-208ENST00000536194 BRD4O60885 1362 aaPredicted RBP15.85■□□□□ 0.13
TNFRSF1A-208ENST00000536194 PLEKHG5O94827 1062 aa15.84■□□□□ 0.13
TNFRSF1A-208ENST00000536194 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
TNFRSF1A-208ENST00000536194 KTN1Q86UP2 1357 aaKnown RBP15.84■□□□□ 0.13
TNFRSF1A-208ENST00000536194 NINLQ9Y2I6 1382 aa15.84■□□□□ 0.13
TNFRSF1A-208ENST00000536194 MEX3CQ5U5Q3 659 aaKnown RBP15.83■□□□□ 0.12
TNFRSF1A-208ENST00000536194 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
TNFRSF1A-208ENST00000536194 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1A-208ENST00000536194 USP54Q70EL1 1684 aa15.83■□□□□ 0.12
TNFRSF1A-208ENST00000536194 C11orf95C9JLR9 678 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-208ENST00000536194 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1A-208ENST00000536194 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
TNFRSF1A-208ENST00000536194 PLCH1Q4KWH8 1693 aa15.82■□□□□ 0.12
TNFRSF1A-208ENST00000536194 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
TNFRSF1A-208ENST00000536194 ABTB2Q8N961 1025 aa15.81■□□□□ 0.12
TNFRSF1A-208ENST00000536194 EDC4Q6P2E9 1401 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1A-208ENST00000536194 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
TNFRSF1A-208ENST00000536194 USP19O94966 1318 aa15.8■□□□□ 0.12
TNFRSF1A-208ENST00000536194 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
TNFRSF1A-208ENST00000536194 SLIT3O75094 1523 aa15.79■□□□□ 0.12
TNFRSF1A-208ENST00000536194 AFF2P51816 1311 aa15.79■□□□□ 0.12
TNFRSF1A-208ENST00000536194 HDGFL2Q7Z4V5 671 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1A-208ENST00000536194 TERF2IPQ9NYB0 399 aa15.79■□□□□ 0.12
TNFRSF1A-208ENST00000536194 TTC21AQ8NDW8 1320 aa15.78■□□□□ 0.12
TNFRSF1A-208ENST00000536194 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.78■□□□□ 0.12
TNFRSF1A-208ENST00000536194 NWD2Q9ULI1 1742 aa15.77■□□□□ 0.12
TNFRSF1A-208ENST00000536194 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
TNFRSF1A-208ENST00000536194 POTEAQ6S8J7 498 aa15.77■□□□□ 0.12
TNFRSF1A-208ENST00000536194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.77■□□□□ 0.12
TNFRSF1A-208ENST00000536194 SLIT2O94813 1529 aa15.77■□□□□ 0.11
TNFRSF1A-208ENST00000536194 COL14A1Q05707 1796 aaKnown RBP15.77■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NRAPQ86VF7 1730 aa15.77■□□□□ 0.11
TNFRSF1A-208ENST00000536194 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 FNBP4Q8N3X1 1017 aaPredicted RBP15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NGLY1Q96IV0 654 aa15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 ZRANB1Q9UGI0 708 aa15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 BCL9LQ86UU0 1499 aa15.76■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NLRP6P59044 892 aa15.75■□□□□ 0.11
TNFRSF1A-208ENST00000536194 ILDR2Q71H61 639 aa15.75■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NME9Q86XW9 330 aa15.75■□□□□ 0.11
TNFRSF1A-208ENST00000536194 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
TNFRSF1A-208ENST00000536194 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NFAT5O94916 1531 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 LMO7Q8WWI1 1683 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 FAM83GA6ND36 823 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 CARD14Q9BXL6 1004 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 OVOS2A0A0J9YW53 1432 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 OVOS2Q6IE36 1432 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 KIAA0232Q92628 1395 aa15.74■□□□□ 0.11
TNFRSF1A-208ENST00000536194 GCP02774 474 aa15.73■□□□□ 0.11
TNFRSF1A-208ENST00000536194 COL18A1P39060 1754 aa15.72■□□□□ 0.11
TNFRSF1A-208ENST00000536194 ZC3H6P61129 1189 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-208ENST00000536194 ZNF772Q68DY9 489 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-208ENST00000536194 CPDO75976 1380 aa15.72■□□□□ 0.11
TNFRSF1A-208ENST00000536194 ATRNO75882 1429 aa15.71■□□□□ 0.11
TNFRSF1A-208ENST00000536194 NSD3Q9BZ95 1437 aa15.71■□□□□ 0.11
TNFRSF1A-208ENST00000536194 USP21Q9UK80 565 aa15.71■□□□□ 0.11
TNFRSF1A-208ENST00000536194 LTN1O94822 1766 aa15.71■□□□□ 0.11
TNFRSF1A-208ENST00000536194 RGPD5Q99666 1765 aa15.71■□□□□ 0.11
TNFRSF1A-208ENST00000536194 CHRNA2Q15822 529 aa15.7■□□□□ 0.1
TNFRSF1A-208ENST00000536194 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
TNFRSF1A-208ENST00000536194 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
TNFRSF1A-208ENST00000536194 CAMTA1Q9Y6Y1 1673 aa15.69■□□□□ 0.1
TNFRSF1A-208ENST00000536194 WASHC2AQ641Q2 1341 aa15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 ANKRD26Q9UPS8 1709 aa15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 GLI3P10071 1580 aa15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 FYB1O15117 783 aa15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 UNC5CLQ8IV45 518 aa15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 QTRT2Q9H974 415 aaKnown RBP15.68■□□□□ 0.1
TNFRSF1A-208ENST00000536194 SOX12O15370 315 aa15.67■□□□□ 0.1
TNFRSF1A-208ENST00000536194 PANK3Q9H999 370 aa15.67■□□□□ 0.1
TNFRSF1A-208ENST00000536194 BTG4Q9NY30 223 aa15.67■□□□□ 0.1
TNFRSF1A-208ENST00000536194 KCNH5Q8NCM2 988 aa15.66■□□□□ 0.1
TNFRSF1A-208ENST00000536194 GGNBP2Q9H3C7 697 aa15.66■□□□□ 0.1
TNFRSF1A-208ENST00000536194 ARHGEF25Q86VW2 580 aa15.65■□□□□ 0.1
TNFRSF1A-208ENST00000536194 TRPC5Q9UL62 973 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1A-208ENST00000536194 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1A-208ENST00000536194 ABCC6O95255 1503 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 AATKQ6ZMQ8 1374 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 ZBTB7CA1YPR0 619 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 FBLN1P23142 703 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 RXRBP28702 533 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 COG3Q96JB2 828 aa15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 COL5A2P05997 1499 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1A-208ENST00000536194 RGS12O14924 1447 aa15.62■□□□□ 0.09
TNFRSF1A-208ENST00000536194 RBM6P78332 1123 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms