RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 NUTM2GQ5VZR2 741 aa25.07■■□□□ 1.6
DDX55-204ENST00000536079 SSH2Q76I76 1423 aa25.06■■□□□ 1.6
DDX55-204ENST00000536079 ARHGEF10O15013 1369 aa25.05■■□□□ 1.6
DDX55-204ENST00000536079 MEX3CQ5U5Q3 659 aaKnown RBP25.04■■□□□ 1.6
DDX55-204ENST00000536079 C11orf95C9JLR9 678 aaPredicted RBP25.03■■□□□ 1.6
DDX55-204ENST00000536079 SLC24A1O60721 1099 aa25.03■■□□□ 1.6
DDX55-204ENST00000536079 PHF23Q9BUL5 403 aaPredicted RBP25.02■■□□□ 1.6
DDX55-204ENST00000536079 AKAP12Q02952 1782 aa25■■□□□ 1.59
DDX55-204ENST00000536079 ABTB2Q8N961 1025 aa25■■□□□ 1.59
DDX55-204ENST00000536079 C8orf37Q96NL8 207 aa25■■□□□ 1.59
DDX55-204ENST00000536079 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
DDX55-204ENST00000536079 TTC21BQ7Z4L5 1316 aa25■■□□□ 1.59
DDX55-204ENST00000536079 A0A1W2PP64 1363 aa25■■□□□ 1.59
DDX55-204ENST00000536079 KTN1Q86UP2 1357 aaKnown RBP25■■□□□ 1.59
DDX55-204ENST00000536079 ABCA3Q99758 1704 aa24.97■■□□□ 1.59
DDX55-204ENST00000536079 POTEAQ6S8J7 498 aa24.96■■□□□ 1.59
DDX55-204ENST00000536079 ZRANB1Q9UGI0 708 aa24.96■■□□□ 1.59
DDX55-204ENST00000536079 NRKQ7Z2Y5 1582 aa24.96■■□□□ 1.59
DDX55-204ENST00000536079 CRYBG1Q9Y4K1 1723 aa24.95■■□□□ 1.59
DDX55-204ENST00000536079 BRD4O60885 1362 aaPredicted RBP24.95■■□□□ 1.59
DDX55-204ENST00000536079 AFF2P51816 1311 aa24.95■■□□□ 1.58
DDX55-204ENST00000536079 CDCA8Q53HL2 280 aa24.95■■□□□ 1.58
DDX55-204ENST00000536079 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.58
DDX55-204ENST00000536079 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.95■■□□□ 1.58
DDX55-204ENST00000536079 ILDR2Q71H61 639 aa24.94■■□□□ 1.58
DDX55-204ENST00000536079 NGLY1Q96IV0 654 aa24.94■■□□□ 1.58
DDX55-204ENST00000536079 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
DDX55-204ENST00000536079 MON2Q7Z3U7 1717 aa24.94■■□□□ 1.58
DDX55-204ENST00000536079 NINLQ9Y2I6 1382 aa24.93■■□□□ 1.58
DDX55-204ENST00000536079 HAP1P54257 671 aaPredicted RBP24.93■■□□□ 1.58
DDX55-204ENST00000536079 TERF2IPQ9NYB0 399 aa24.93■■□□□ 1.58
DDX55-204ENST00000536079 PIK3C2AO00443 1686 aa24.93■■□□□ 1.58
DDX55-204ENST00000536079 USP19O94966 1318 aa24.92■■□□□ 1.58
DDX55-204ENST00000536079 MYOM1P52179 1685 aa24.92■■□□□ 1.58
DDX55-204ENST00000536079 NME9Q86XW9 330 aa24.92■■□□□ 1.58
DDX55-204ENST00000536079 ANKRD36BQ8N2N9 1353 aa24.92■■□□□ 1.58
DDX55-204ENST00000536079 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
DDX55-204ENST00000536079 NLRP6P59044 892 aa24.91■■□□□ 1.58
DDX55-204ENST00000536079 FNBP4Q8N3X1 1017 aaPredicted RBP24.9■■□□□ 1.58
DDX55-204ENST00000536079 TTC21AQ8NDW8 1320 aa24.89■■□□□ 1.58
DDX55-204ENST00000536079 EDC4Q6P2E9 1401 aaKnown RBP24.89■■□□□ 1.58
DDX55-204ENST00000536079 NLRP13Q86W25 1043 aa24.89■■□□□ 1.58
DDX55-204ENST00000536079 CARD14Q9BXL6 1004 aa24.89■■□□□ 1.58
DDX55-204ENST00000536079 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.57
DDX55-204ENST00000536079 PHRF1Q9P1Y6 1649 aaKnown RBP24.88■■□□□ 1.57
DDX55-204ENST00000536079 ZC3H6P61129 1189 aaKnown RBP24.87■■□□□ 1.57
DDX55-204ENST00000536079 KIF7Q2M1P5 1343 aa24.86■■□□□ 1.57
DDX55-204ENST00000536079 BCL9LQ86UU0 1499 aa24.86■■□□□ 1.57
DDX55-204ENST00000536079 GCP02774 474 aa24.86■■□□□ 1.57
DDX55-204ENST00000536079 KIAA0232Q92628 1395 aa24.85■■□□□ 1.57
DDX55-204ENST00000536079 USP21Q9UK80 565 aa24.85■■□□□ 1.57
DDX55-204ENST00000536079 SLIT2O94813 1529 aa24.85■■□□□ 1.57
DDX55-204ENST00000536079 CHRNA2Q15822 529 aa24.84■■□□□ 1.57
DDX55-204ENST00000536079 ZNF772Q68DY9 489 aaPredicted RBP24.84■■□□□ 1.57
DDX55-204ENST00000536079 SLIT3O75094 1523 aa24.84■■□□□ 1.57
DDX55-204ENST00000536079 USP31Q70CQ4 1352 aa24.83■■□□□ 1.57
DDX55-204ENST00000536079 SOX12O15370 315 aa24.81■■□□□ 1.56
DDX55-204ENST00000536079 QTRT2Q9H974 415 aaKnown RBP24.81■■□□□ 1.56
DDX55-204ENST00000536079 PANK3Q9H999 370 aa24.8■■□□□ 1.56
DDX55-204ENST00000536079 PRDM11Q9NQV5 511 aa24.8■■□□□ 1.56
DDX55-204ENST00000536079 FYB1O15117 783 aa24.79■■□□□ 1.56
DDX55-204ENST00000536079 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
DDX55-204ENST00000536079 ATRNO75882 1429 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 NSD3Q9BZ95 1437 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 BTG4Q9NY30 223 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 WASHC2AQ641Q2 1341 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 PLCH1Q4KWH8 1693 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 CPDO75976 1380 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 OVOS2A0A0J9YW53 1432 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 OVOS2Q6IE36 1432 aa24.78■■□□□ 1.56
DDX55-204ENST00000536079 GGNBP2Q9H3C7 697 aa24.76■■□□□ 1.55
DDX55-204ENST00000536079 CCDC7Q96M83 1385 aa24.76■■□□□ 1.55
DDX55-204ENST00000536079 NFAT5O94916 1531 aa24.76■■□□□ 1.55
DDX55-204ENST00000536079 USP54Q70EL1 1684 aa24.75■■□□□ 1.55
DDX55-204ENST00000536079 COL14A1Q05707 1796 aaKnown RBP24.75■■□□□ 1.55
DDX55-204ENST00000536079 ZBTB7CA1YPR0 619 aa24.75■■□□□ 1.55
DDX55-204ENST00000536079 FBLN1P23142 703 aa24.75■■□□□ 1.55
DDX55-204ENST00000536079 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
DDX55-204ENST00000536079 ARHGEF25Q86VW2 580 aa24.73■■□□□ 1.55
DDX55-204ENST00000536079 CAMTA1Q9Y6Y1 1673 aa24.72■■□□□ 1.55
DDX55-204ENST00000536079 RXRBP28702 533 aa24.72■■□□□ 1.55
DDX55-204ENST00000536079 KCNH5Q8NCM2 988 aa24.72■■□□□ 1.55
DDX55-204ENST00000536079 AXIN2Q9Y2T1 843 aa24.72■■□□□ 1.55
DDX55-204ENST00000536079 NRAPQ86VF7 1730 aa24.72■■□□□ 1.55
DDX55-204ENST00000536079 NWD2Q9ULI1 1742 aa24.7■■□□□ 1.54
DDX55-204ENST00000536079 LMO7Q8WWI1 1683 aa24.7■■□□□ 1.54
DDX55-204ENST00000536079 COG3Q96JB2 828 aa24.7■■□□□ 1.54
DDX55-204ENST00000536079 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.69■■□□□ 1.54
DDX55-204ENST00000536079 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
DDX55-204ENST00000536079 RBM6P78332 1123 aaKnown RBP24.69■■□□□ 1.54
DDX55-204ENST00000536079 VPS72Q15906 364 aa24.69■■□□□ 1.54
DDX55-204ENST00000536079 GJD4Q96KN9 370 aaPredicted RBP24.69■■□□□ 1.54
DDX55-204ENST00000536079 AATKQ6ZMQ8 1374 aa24.68■■□□□ 1.54
DDX55-204ENST00000536079 STRN4Q9NRL3 753 aa24.68■■□□□ 1.54
DDX55-204ENST00000536079 COL18A1P39060 1754 aa24.67■■□□□ 1.54
DDX55-204ENST00000536079 GLI3P10071 1580 aa24.67■■□□□ 1.54
DDX55-204ENST00000536079 LARP1Q6PKG0 1096 aaKnown RBP24.65■■□□□ 1.54
DDX55-204ENST00000536079 CGNL1Q0VF96 1302 aa24.64■■□□□ 1.54
DDX55-204ENST00000536079 RGS12O14924 1447 aa24.64■■□□□ 1.54
DDX55-204ENST00000536079 KIF20BQ96Q89 1820 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms