RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 COL14A1Q05707 1796 aaKnown RBP18.91■□□□□ 0.62
RTN3-207ENST00000536011 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
RTN3-207ENST00000536011 CCDC61Q9Y6R9 512 aa18.9■□□□□ 0.62
RTN3-207ENST00000536011 FAM83GA6ND36 823 aa18.89■□□□□ 0.61
RTN3-207ENST00000536011 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
RTN3-207ENST00000536011 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
RTN3-207ENST00000536011 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
RTN3-207ENST00000536011 BTG4Q9NY30 223 aa18.87■□□□□ 0.61
RTN3-207ENST00000536011 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
RTN3-207ENST00000536011 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
RTN3-207ENST00000536011 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
RTN3-207ENST00000536011 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
RTN3-207ENST00000536011 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
RTN3-207ENST00000536011 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
RTN3-207ENST00000536011 ACEP12821 1306 aa18.85■□□□□ 0.61
RTN3-207ENST00000536011 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
RTN3-207ENST00000536011 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
RTN3-207ENST00000536011 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
RTN3-207ENST00000536011 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
RTN3-207ENST00000536011 PHRF1Q9P1Y6 1649 aaKnown RBP18.83■□□□□ 0.61
RTN3-207ENST00000536011 A0A0G2JS52 829 aa18.83■□□□□ 0.6
RTN3-207ENST00000536011 MYT1Q01538 1121 aa18.83■□□□□ 0.6
RTN3-207ENST00000536011 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
RTN3-207ENST00000536011 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
RTN3-207ENST00000536011 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
RTN3-207ENST00000536011 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
RTN3-207ENST00000536011 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
RTN3-207ENST00000536011 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
RTN3-207ENST00000536011 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
RTN3-207ENST00000536011 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
RTN3-207ENST00000536011 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
RTN3-207ENST00000536011 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
RTN3-207ENST00000536011 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
RTN3-207ENST00000536011 FAM98CQ17RN3 349 aaKnown RBP18.79■□□□□ 0.6
RTN3-207ENST00000536011 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
RTN3-207ENST00000536011 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
RTN3-207ENST00000536011 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
RTN3-207ENST00000536011 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
RTN3-207ENST00000536011 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
RTN3-207ENST00000536011 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
RTN3-207ENST00000536011 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
RTN3-207ENST00000536011 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
RTN3-207ENST00000536011 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
RTN3-207ENST00000536011 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
RTN3-207ENST00000536011 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
RTN3-207ENST00000536011 USP19O94966 1318 aa18.75■□□□□ 0.59
RTN3-207ENST00000536011 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
RTN3-207ENST00000536011 CPDO75976 1380 aa18.75■□□□□ 0.59
RTN3-207ENST00000536011 CHRNA2Q15822 529 aa18.74■□□□□ 0.59
RTN3-207ENST00000536011 USP6P35125 1406 aa18.74■□□□□ 0.59
RTN3-207ENST00000536011 THSD7AQ9UPZ6 1657 aa18.73■□□□□ 0.59
RTN3-207ENST00000536011 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
RTN3-207ENST00000536011 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
RTN3-207ENST00000536011 EVA1CP58658 441 aa18.72■□□□□ 0.59
RTN3-207ENST00000536011 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
RTN3-207ENST00000536011 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
RTN3-207ENST00000536011 GCP02774 474 aa18.7■□□□□ 0.58
RTN3-207ENST00000536011 BAG6P46379 1132 aa18.7■□□□□ 0.58
RTN3-207ENST00000536011 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
RTN3-207ENST00000536011 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
RTN3-207ENST00000536011 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
RTN3-207ENST00000536011 NLRP6P59044 892 aa18.68■□□□□ 0.58
RTN3-207ENST00000536011 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
RTN3-207ENST00000536011 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
RTN3-207ENST00000536011 LMO7Q8WWI1 1683 aa18.68■□□□□ 0.58
RTN3-207ENST00000536011 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
RTN3-207ENST00000536011 SLIT3O75094 1523 aa18.66■□□□□ 0.58
RTN3-207ENST00000536011 BARGINQ6ZT62 677 aa18.66■□□□□ 0.58
RTN3-207ENST00000536011 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
RTN3-207ENST00000536011 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
RTN3-207ENST00000536011 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
RTN3-207ENST00000536011 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
RTN3-207ENST00000536011 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
RTN3-207ENST00000536011 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
RTN3-207ENST00000536011 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
RTN3-207ENST00000536011 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
RTN3-207ENST00000536011 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
RTN3-207ENST00000536011 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
RTN3-207ENST00000536011 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
RTN3-207ENST00000536011 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
RTN3-207ENST00000536011 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
RTN3-207ENST00000536011 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
RTN3-207ENST00000536011 CRB1P82279 1406 aa18.61■□□□□ 0.57
RTN3-207ENST00000536011 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
RTN3-207ENST00000536011 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
RTN3-207ENST00000536011 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
RTN3-207ENST00000536011 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
RTN3-207ENST00000536011 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
RTN3-207ENST00000536011 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
RTN3-207ENST00000536011 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
RTN3-207ENST00000536011 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
RTN3-207ENST00000536011 MON2Q7Z3U7 1717 aa18.57■□□□□ 0.56
RTN3-207ENST00000536011 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
RTN3-207ENST00000536011 PARD3Q8TEW0 1356 aa18.57■□□□□ 0.56
RTN3-207ENST00000536011 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
RTN3-207ENST00000536011 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
RTN3-207ENST00000536011 ABCC6O95255 1503 aa18.55■□□□□ 0.56
RTN3-207ENST00000536011 TRIM37O94972 964 aa18.55■□□□□ 0.56
RTN3-207ENST00000536011 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
RTN3-207ENST00000536011 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms