RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 FNBP4Q8N3X1 1017 aaPredicted RBP17.94■□□□□ 0.46
VPS37C-203ENST00000536000 ABTB2Q8N961 1025 aa17.93■□□□□ 0.46
VPS37C-203ENST00000536000 ZNF692Q9BU19 519 aaPredicted RBP17.93■□□□□ 0.46
VPS37C-203ENST00000536000 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
VPS37C-203ENST00000536000 NUTM2GQ5VZR2 741 aa17.92■□□□□ 0.46
VPS37C-203ENST00000536000 PUS7Q96PZ0 661 aaKnown RBP17.91■□□□□ 0.46
VPS37C-203ENST00000536000 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
VPS37C-203ENST00000536000 TESK2Q96S53 571 aa17.9■□□□□ 0.46
VPS37C-203ENST00000536000 TRPC5Q9UL62 973 aaPredicted RBP17.9■□□□□ 0.46
VPS37C-203ENST00000536000 TRPM3Q9HCF6 1732 aaPredicted RBP17.89■□□□□ 0.46
VPS37C-203ENST00000536000 RBM6P78332 1123 aaKnown RBP17.89■□□□□ 0.45
VPS37C-203ENST00000536000 NLRP13Q86W25 1043 aa17.89■□□□□ 0.45
VPS37C-203ENST00000536000 TOPAZ1Q8N9V7 1692 aa17.89■□□□□ 0.45
VPS37C-203ENST00000536000 BRD4O60885 1362 aaPredicted RBP17.89■□□□□ 0.45
VPS37C-203ENST00000536000 USP47Q96K76 1375 aa17.89■□□□□ 0.45
VPS37C-203ENST00000536000 FAM83GA6ND36 823 aa17.88■□□□□ 0.45
VPS37C-203ENST00000536000 TMF1P82094 1093 aa17.87■□□□□ 0.45
VPS37C-203ENST00000536000 UNC5CLQ8IV45 518 aa17.87■□□□□ 0.45
VPS37C-203ENST00000536000 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
VPS37C-203ENST00000536000 ALS2Q96Q42 1657 aa17.86■□□□□ 0.45
VPS37C-203ENST00000536000 USP6P35125 1406 aa17.85■□□□□ 0.45
VPS37C-203ENST00000536000 NLRP6P59044 892 aa17.85■□□□□ 0.45
VPS37C-203ENST00000536000 HDGFL2Q7Z4V5 671 aaPredicted RBP17.85■□□□□ 0.45
VPS37C-203ENST00000536000 MARF1Q9Y4F3 1742 aaKnown RBP17.84■□□□□ 0.45
VPS37C-203ENST00000536000 BCL9LQ86UU0 1499 aa17.83■□□□□ 0.45
VPS37C-203ENST00000536000 KTN1Q86UP2 1357 aaKnown RBP17.83■□□□□ 0.45
VPS37C-203ENST00000536000 TTC21BQ7Z4L5 1316 aa17.83■□□□□ 0.44
VPS37C-203ENST00000536000 ZC3H6P61129 1189 aaKnown RBP17.83■□□□□ 0.44
VPS37C-203ENST00000536000 CDCA8Q53HL2 280 aa17.83■□□□□ 0.44
VPS37C-203ENST00000536000 PRDM11Q9NQV5 511 aa17.83■□□□□ 0.44
VPS37C-203ENST00000536000 TERF2IPQ9NYB0 399 aa17.83■□□□□ 0.44
VPS37C-203ENST00000536000 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
VPS37C-203ENST00000536000 TTC21AQ8NDW8 1320 aa17.81■□□□□ 0.44
VPS37C-203ENST00000536000 GCP02774 474 aa17.81■□□□□ 0.44
VPS37C-203ENST00000536000 BTG4Q9NY30 223 aa17.81■□□□□ 0.44
VPS37C-203ENST00000536000 SLIT2O94813 1529 aa17.81■□□□□ 0.44
VPS37C-203ENST00000536000 ATRNO75882 1429 aa17.81■□□□□ 0.44
VPS37C-203ENST00000536000 CPSF1Q10570 1443 aaKnown RBP17.81■□□□□ 0.44
VPS37C-203ENST00000536000 EIF4G2P78344 907 aaKnown RBP eCLIP17.8■□□□□ 0.44
VPS37C-203ENST00000536000 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
VPS37C-203ENST00000536000 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
VPS37C-203ENST00000536000 CHRNA2Q15822 529 aa17.79■□□□□ 0.44
VPS37C-203ENST00000536000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.44
VPS37C-203ENST00000536000 USP19O94966 1318 aa17.78■□□□□ 0.44
VPS37C-203ENST00000536000 VPS72Q15906 364 aa17.78■□□□□ 0.44
VPS37C-203ENST00000536000 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
VPS37C-203ENST00000536000 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
VPS37C-203ENST00000536000 ABCA3Q99758 1704 aa17.76■□□□□ 0.43
VPS37C-203ENST00000536000 HSPA5P11021 654 aaKnown RBP17.76■□□□□ 0.43
VPS37C-203ENST00000536000 EVA1CP58658 441 aa17.76■□□□□ 0.43
VPS37C-203ENST00000536000 NINLQ9Y2I6 1382 aa17.76■□□□□ 0.43
VPS37C-203ENST00000536000 ZBTB7CA1YPR0 619 aa17.75■□□□□ 0.43
VPS37C-203ENST00000536000 KCNH5Q8NCM2 988 aa17.75■□□□□ 0.43
VPS37C-203ENST00000536000 AKAP12Q02952 1782 aa17.75■□□□□ 0.43
VPS37C-203ENST00000536000 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
VPS37C-203ENST00000536000 NME9Q86XW9 330 aa17.73■□□□□ 0.43
VPS37C-203ENST00000536000 STRN4Q9NRL3 753 aa17.73■□□□□ 0.43
VPS37C-203ENST00000536000 ZRANB1Q9UGI0 708 aa17.73■□□□□ 0.43
VPS37C-203ENST00000536000 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
VPS37C-203ENST00000536000 COL14A1Q05707 1796 aaKnown RBP17.73■□□□□ 0.43
VPS37C-203ENST00000536000 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
VPS37C-203ENST00000536000 CPDO75976 1380 aa17.72■□□□□ 0.43
VPS37C-203ENST00000536000 SOX12O15370 315 aa17.72■□□□□ 0.43
VPS37C-203ENST00000536000 POLR3GLQ9BT43 218 aa17.72■□□□□ 0.43
VPS37C-203ENST00000536000 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
VPS37C-203ENST00000536000 EDC4Q6P2E9 1401 aaKnown RBP17.72■□□□□ 0.43
VPS37C-203ENST00000536000 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.43
VPS37C-203ENST00000536000 RGS12O14924 1447 aa17.71■□□□□ 0.43
VPS37C-203ENST00000536000 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.42
VPS37C-203ENST00000536000 USP31Q70CQ4 1352 aa17.7■□□□□ 0.42
VPS37C-203ENST00000536000 PHRF1Q9P1Y6 1649 aaKnown RBP17.7■□□□□ 0.42
VPS37C-203ENST00000536000 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
VPS37C-203ENST00000536000 ONECUT3O60422 494 aaPredicted RBP17.69■□□□□ 0.42
VPS37C-203ENST00000536000 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
VPS37C-203ENST00000536000 SEPT12Q8IYM1 358 aa17.69■□□□□ 0.42
VPS37C-203ENST00000536000 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
VPS37C-203ENST00000536000 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
VPS37C-203ENST00000536000 A0A0G2JS52 829 aa17.68■□□□□ 0.42
VPS37C-203ENST00000536000 MYT1Q01538 1121 aa17.68■□□□□ 0.42
VPS37C-203ENST00000536000 MON2Q7Z3U7 1717 aa17.68■□□□□ 0.42
VPS37C-203ENST00000536000 PIK3C2AO00443 1686 aa17.67■□□□□ 0.42
VPS37C-203ENST00000536000 FAM98CQ17RN3 349 aaKnown RBP17.67■□□□□ 0.42
VPS37C-203ENST00000536000 SLIT3O75094 1523 aa17.67■□□□□ 0.42
VPS37C-203ENST00000536000 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
VPS37C-203ENST00000536000 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
VPS37C-203ENST00000536000 UPF1Q92900 1129 aaKnown RBP eCLIP17.66■□□□□ 0.42
VPS37C-203ENST00000536000 COG3Q96JB2 828 aa17.66■□□□□ 0.42
VPS37C-203ENST00000536000 USP35Q9P2H5 1018 aa17.66■□□□□ 0.42
VPS37C-203ENST00000536000 GLI3P10071 1580 aa17.66■□□□□ 0.42
VPS37C-203ENST00000536000 LARP1Q6PKG0 1096 aaKnown RBP17.65■□□□□ 0.42
VPS37C-203ENST00000536000 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
VPS37C-203ENST00000536000 CAMTA1Q9Y6Y1 1673 aa17.64■□□□□ 0.42
VPS37C-203ENST00000536000 AXIN2Q9Y2T1 843 aa17.64■□□□□ 0.41
VPS37C-203ENST00000536000 NRAPQ86VF7 1730 aa17.64■□□□□ 0.41
VPS37C-203ENST00000536000 FYB1O15117 783 aa17.63■□□□□ 0.41
VPS37C-203ENST00000536000 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
VPS37C-203ENST00000536000 CARD14Q9BXL6 1004 aa17.62■□□□□ 0.41
VPS37C-203ENST00000536000 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
VPS37C-203ENST00000536000 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
VPS37C-203ENST00000536000 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms