RNA–Protein interactions for RNA: ENST00000535979.5

CDK2AP1-203, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-203ENST00000535979 CRYBG1Q9Y4K1 1723 aa40.22■■■■■ 4.03
CDK2AP1-203ENST00000535979 SRPK2P78362 688 aaKnown RBP40.22■■■■■ 4.03
CDK2AP1-203ENST00000535979 GJD4Q96KN9 370 aaPredicted RBP40.22■■■■■ 4.03
CDK2AP1-203ENST00000535979 PLEKHG3A1L390 1219 aa40.21■■■■■ 4.03
CDK2AP1-203ENST00000535979 ACEP12821 1306 aa40.18■■■■■ 4.02
CDK2AP1-203ENST00000535979 COL14A1Q05707 1796 aaKnown RBP40.16■■■■■ 4.02
CDK2AP1-203ENST00000535979 TONSLQ96HA7 1378 aa40.16■■■■■ 4.02
CDK2AP1-203ENST00000535979 NBPF8Q3BBV2 869 aa40.16■■■■■ 4.02
CDK2AP1-203ENST00000535979 PPIP5K1Q6PFW1 1433 aa40.15■■■■■ 4.02
CDK2AP1-203ENST00000535979 EP400Q96L91 3159 aa40.15■■■■■ 4.02
CDK2AP1-203ENST00000535979 RALGAPBQ86X10 1494 aa40.14■■■■■ 4.02
CDK2AP1-203ENST00000535979 GLI3P10071 1580 aa40.13■■■■■ 4.01
CDK2AP1-203ENST00000535979 ATAD2Q6PL18 1390 aa40.12■■■■■ 4.01
CDK2AP1-203ENST00000535979 FAM83GA6ND36 823 aa40.12■■■■■ 4.01
CDK2AP1-203ENST00000535979 CABP2Q9NPB3 220 aa40.12■■■■■ 4.01
CDK2AP1-203ENST00000535979 EVC2Q86UK5 1308 aa40.12■■■■■ 4.01
CDK2AP1-203ENST00000535979 PHRF1Q9P1Y6 1649 aaKnown RBP40.1■■■■■ 4.01
CDK2AP1-203ENST00000535979 VPS72Q15906 364 aa40.1■■■■■ 4.01
CDK2AP1-203ENST00000535979 NRAPQ86VF7 1730 aa40.09■■■■■ 4.01
CDK2AP1-203ENST00000535979 BRD4O60885 1362 aaPredicted RBP40.05■■■■■ 4
CDK2AP1-203ENST00000535979 BTG4Q9NY30 223 aa40.02■■■■■ 4
CDK2AP1-203ENST00000535979 CCDC9Q9Y3X0 531 aaKnown RBP40.01■■■■■ 4
CDK2AP1-203ENST00000535979 ABTB2Q8N961 1025 aa40■■■■□ 3.99
CDK2AP1-203ENST00000535979 CARD11Q9BXL7 1154 aa39.99■■■■□ 3.99
CDK2AP1-203ENST00000535979 PRDM11Q9NQV5 511 aa39.99■■■■□ 3.99
CDK2AP1-203ENST00000535979 CABP1Q9NZU7 370 aa39.99■■■■□ 3.99
CDK2AP1-203ENST00000535979 BRWD3Q6RI45 1802 aa39.98■■■■□ 3.99
CDK2AP1-203ENST00000535979 SBNO2Q9Y2G9 1366 aa39.97■■■■□ 3.99
CDK2AP1-203ENST00000535979 NUTM2GQ5VZR2 741 aa39.96■■■■□ 3.99
CDK2AP1-203ENST00000535979 USP6P35125 1406 aa39.94■■■■□ 3.98
CDK2AP1-203ENST00000535979 KIAA0232Q92628 1395 aa39.94■■■■□ 3.98
CDK2AP1-203ENST00000535979 NRKQ7Z2Y5 1582 aa39.93■■■■□ 3.98
CDK2AP1-203ENST00000535979 ONECUT3O60422 494 aaPredicted RBP39.92■■■■□ 3.98
CDK2AP1-203ENST00000535979 NLRP13Q86W25 1043 aa39.91■■■■□ 3.98
CDK2AP1-203ENST00000535979 AKAP12Q02952 1782 aa39.91■■■■□ 3.98
CDK2AP1-203ENST00000535979 USP19O94966 1318 aa39.9■■■■□ 3.98
CDK2AP1-203ENST00000535979 SEPT12Q8IYM1 358 aa39.89■■■■□ 3.98
CDK2AP1-203ENST00000535979 ZC3H6P61129 1189 aaKnown RBP39.87■■■■□ 3.97
CDK2AP1-203ENST00000535979 CCDC125Q86Z20 511 aa39.86■■■■□ 3.97
CDK2AP1-203ENST00000535979 ZNF692Q9BU19 519 aaPredicted RBP39.86■■■■□ 3.97
CDK2AP1-203ENST00000535979 CPDO75976 1380 aa39.84■■■■□ 3.97
CDK2AP1-203ENST00000535979 CHRNA2Q15822 529 aa39.83■■■■□ 3.97
CDK2AP1-203ENST00000535979 SPATA31A5Q5VU36 1347 aa39.83■■■■□ 3.97
CDK2AP1-203ENST00000535979 SPATA31A7Q8IWB4 1347 aa39.83■■■■□ 3.97
CDK2AP1-203ENST00000535979 SSH2Q76I76 1423 aa39.82■■■■□ 3.97
CDK2AP1-203ENST00000535979 PIK3C2AO00443 1686 aa39.81■■■■□ 3.96
CDK2AP1-203ENST00000535979 GCP02774 474 aa39.79■■■■□ 3.96
CDK2AP1-203ENST00000535979 FAM98CQ17RN3 349 aaKnown RBP39.79■■■■□ 3.96
CDK2AP1-203ENST00000535979 A0A0G2JS52 829 aa39.78■■■■□ 3.96
CDK2AP1-203ENST00000535979 NLRP6P59044 892 aa39.78■■■■□ 3.96
CDK2AP1-203ENST00000535979 MYT1Q01538 1121 aa39.78■■■■□ 3.96
CDK2AP1-203ENST00000535979 LMO7Q8WWI1 1683 aa39.77■■■■□ 3.96
CDK2AP1-203ENST00000535979 KRT27Q7Z3Y8 459 aa39.77■■■■□ 3.96
CDK2AP1-203ENST00000535979 SLIT3O75094 1523 aa39.76■■■■□ 3.96
CDK2AP1-203ENST00000535979 CPSF1Q10570 1443 aaKnown RBP39.76■■■■□ 3.96
CDK2AP1-203ENST00000535979 MON2Q7Z3U7 1717 aa39.75■■■■□ 3.95
CDK2AP1-203ENST00000535979 STRN4Q9NRL3 753 aa39.74■■■■□ 3.95
CDK2AP1-203ENST00000535979 THSD7AQ9UPZ6 1657 aa39.73■■■■□ 3.95
CDK2AP1-203ENST00000535979 SPATA31A1Q5TZJ5 1347 aa39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 TTC21AQ8NDW8 1320 aa39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 EVA1CP58658 441 aa39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 CAMTA1Q9Y6Y1 1673 aa39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 BLMP54132 1417 aaPredicted RBP39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 KTN1Q86UP2 1357 aaKnown RBP39.72■■■■□ 3.95
CDK2AP1-203ENST00000535979 TTC21BQ7Z4L5 1316 aa39.71■■■■□ 3.95
CDK2AP1-203ENST00000535979 SLC24A1O60721 1099 aa39.69■■■■□ 3.94
CDK2AP1-203ENST00000535979 PUS7Q96PZ0 661 aaKnown RBP39.68■■■■□ 3.94
CDK2AP1-203ENST00000535979 CLSPNQ9HAW4 1339 aa39.67■■■■□ 3.94
CDK2AP1-203ENST00000535979 SF3B2Q13435 895 aaKnown RBP39.62■■■■□ 3.93
CDK2AP1-203ENST00000535979 KCNH5Q8NCM2 988 aa39.62■■■■□ 3.93
CDK2AP1-203ENST00000535979 TMC1Q8TDI8 760 aa39.62■■■■□ 3.93
CDK2AP1-203ENST00000535979 TIMELESSQ9UNS1 1208 aa39.62■■■■□ 3.93
CDK2AP1-203ENST00000535979 AATKQ6ZMQ8 1374 aa39.61■■■■□ 3.93
CDK2AP1-203ENST00000535979 ST20-MTHFSA0A0A6YYL1 179 aa39.61■■■■□ 3.93
CDK2AP1-203ENST00000535979 COL5A2P05997 1499 aaPredicted RBP39.61■■■■□ 3.93
CDK2AP1-203ENST00000535979 HDGFL2Q7Z4V5 671 aaPredicted RBP39.6■■■■□ 3.93
CDK2AP1-203ENST00000535979 CD163L1Q9NR16 1453 aa39.6■■■■□ 3.93
CDK2AP1-203ENST00000535979 TESK2Q96S53 571 aa39.59■■■■□ 3.93
CDK2AP1-203ENST00000535979 PCGF6Q9BYE7 350 aa39.59■■■■□ 3.93
CDK2AP1-203ENST00000535979 USP54Q70EL1 1684 aa39.58■■■■□ 3.93
CDK2AP1-203ENST00000535979 LARP1Q6PKG0 1096 aaKnown RBP39.58■■■■□ 3.93
CDK2AP1-203ENST00000535979 BARGINQ6ZT62 677 aa39.58■■■■□ 3.93
CDK2AP1-203ENST00000535979 COL18A1P39060 1754 aa39.58■■■■□ 3.93
CDK2AP1-203ENST00000535979 USP35Q9P2H5 1018 aa39.57■■■■□ 3.93
CDK2AP1-203ENST00000535979 ZBTB7CA1YPR0 619 aa39.56■■■■□ 3.92
CDK2AP1-203ENST00000535979 TERF2IPQ9NYB0 399 aa39.56■■■■□ 3.92
CDK2AP1-203ENST00000535979 NINLQ9Y2I6 1382 aa39.56■■■■□ 3.92
CDK2AP1-203ENST00000535979 THRAP3Q9Y2W1 955 aaKnown RBP39.55■■■■□ 3.92
CDK2AP1-203ENST00000535979 TCP11L2Q8N4U5 519 aa39.54■■■■□ 3.92
CDK2AP1-203ENST00000535979 SLC12A5Q9H2X9 1139 aa39.54■■■■□ 3.92
CDK2AP1-203ENST00000535979 RGPD1P0DJD0 1748 aa39.54■■■■□ 3.92
CDK2AP1-203ENST00000535979 CRB1P82279 1406 aa39.52■■■■□ 3.92
CDK2AP1-203ENST00000535979 EDC4Q6P2E9 1401 aaKnown RBP39.52■■■■□ 3.92
CDK2AP1-203ENST00000535979 NFAT5O94916 1531 aa39.51■■■■□ 3.92
CDK2AP1-203ENST00000535979 USP47Q96K76 1375 aa39.51■■■■□ 3.92
CDK2AP1-203ENST00000535979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.51■■■■□ 3.92
CDK2AP1-203ENST00000535979 USP31Q70CQ4 1352 aa39.5■■■■□ 3.91
CDK2AP1-203ENST00000535979 ARHGEF25Q86VW2 580 aa39.5■■■■□ 3.91
CDK2AP1-203ENST00000535979 RGPD5Q99666 1765 aa39.49■■■■□ 3.91
CDK2AP1-203ENST00000535979 A0A1W2PP64 1363 aa39.48■■■■□ 3.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms