RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
KNTC1-208ENST00000535410 ATAD2Q6PL18 1390 aa16.88■□□□□ 0.29
KNTC1-208ENST00000535410 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
KNTC1-208ENST00000535410 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
KNTC1-208ENST00000535410 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
KNTC1-208ENST00000535410 MARF1Q9Y4F3 1742 aaKnown RBP16.86■□□□□ 0.29
KNTC1-208ENST00000535410 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
KNTC1-208ENST00000535410 NLRP13Q86W25 1043 aa16.85■□□□□ 0.29
KNTC1-208ENST00000535410 CCDC125Q86Z20 511 aa16.85■□□□□ 0.29
KNTC1-208ENST00000535410 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
KNTC1-208ENST00000535410 PRDM11Q9NQV5 511 aa16.85■□□□□ 0.29
KNTC1-208ENST00000535410 PPIP5K1Q6PFW1 1433 aa16.85■□□□□ 0.29
KNTC1-208ENST00000535410 BTG4Q9NY30 223 aa16.84■□□□□ 0.29
KNTC1-208ENST00000535410 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
KNTC1-208ENST00000535410 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
KNTC1-208ENST00000535410 TRPM1Q7Z4N2 1603 aa16.82■□□□□ 0.28
KNTC1-208ENST00000535410 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
KNTC1-208ENST00000535410 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
KNTC1-208ENST00000535410 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.81■□□□□ 0.28
KNTC1-208ENST00000535410 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
KNTC1-208ENST00000535410 ALS2Q96Q42 1657 aa16.8■□□□□ 0.28
KNTC1-208ENST00000535410 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
KNTC1-208ENST00000535410 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
KNTC1-208ENST00000535410 QRICH2Q9H0J4 1663 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 SBNO2Q9Y2G9 1366 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 A0A0G2JS52 829 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 EVA1CP58658 441 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 MYT1Q01538 1121 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 TIMELESSQ9UNS1 1208 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 NWD2Q9ULI1 1742 aa16.78■□□□□ 0.28
KNTC1-208ENST00000535410 KIAA0232Q92628 1395 aa16.77■□□□□ 0.28
KNTC1-208ENST00000535410 NLRP6P59044 892 aa16.77■□□□□ 0.28
KNTC1-208ENST00000535410 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.28
KNTC1-208ENST00000535410 TOPAZ1Q8N9V7 1692 aa16.77■□□□□ 0.28
KNTC1-208ENST00000535410 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
KNTC1-208ENST00000535410 GCP02774 474 aa16.76■□□□□ 0.27
KNTC1-208ENST00000535410 COL14A1Q05707 1796 aaKnown RBP16.76■□□□□ 0.27
KNTC1-208ENST00000535410 USP19O94966 1318 aa16.75■□□□□ 0.27
KNTC1-208ENST00000535410 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
KNTC1-208ENST00000535410 KRT27Q7Z3Y8 459 aa16.75■□□□□ 0.27
KNTC1-208ENST00000535410 USP6P35125 1406 aa16.75■□□□□ 0.27
KNTC1-208ENST00000535410 SPATA31A5Q5VU36 1347 aa16.74■□□□□ 0.27
KNTC1-208ENST00000535410 SPATA31A7Q8IWB4 1347 aa16.74■□□□□ 0.27
KNTC1-208ENST00000535410 ABCA3Q99758 1704 aa16.74■□□□□ 0.27
KNTC1-208ENST00000535410 CHRNA2Q15822 529 aa16.74■□□□□ 0.27
KNTC1-208ENST00000535410 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
KNTC1-208ENST00000535410 CPDO75976 1380 aa16.74■□□□□ 0.27
KNTC1-208ENST00000535410 TTC21AQ8NDW8 1320 aa16.73■□□□□ 0.27
KNTC1-208ENST00000535410 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
KNTC1-208ENST00000535410 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
KNTC1-208ENST00000535410 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
KNTC1-208ENST00000535410 GLI3P10071 1580 aa16.72■□□□□ 0.27
KNTC1-208ENST00000535410 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
KNTC1-208ENST00000535410 TMC1Q8TDI8 760 aa16.72■□□□□ 0.27
KNTC1-208ENST00000535410 ADRA2BP18089 450 aa16.71■□□□□ 0.27
KNTC1-208ENST00000535410 PCGF6Q9BYE7 350 aa16.71■□□□□ 0.27
KNTC1-208ENST00000535410 TERF2IPQ9NYB0 399 aa16.71■□□□□ 0.27
KNTC1-208ENST00000535410 KTN1Q86UP2 1357 aaKnown RBP16.71■□□□□ 0.27
KNTC1-208ENST00000535410 TTC21BQ7Z4L5 1316 aa16.7■□□□□ 0.26
KNTC1-208ENST00000535410 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
KNTC1-208ENST00000535410 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
KNTC1-208ENST00000535410 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
KNTC1-208ENST00000535410 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
KNTC1-208ENST00000535410 ST20-MTHFSA0A0A6YYL1 179 aa16.68■□□□□ 0.26
KNTC1-208ENST00000535410 CPSF1Q10570 1443 aaKnown RBP16.68■□□□□ 0.26
KNTC1-208ENST00000535410 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
KNTC1-208ENST00000535410 TCP11L2Q8N4U5 519 aa16.67■□□□□ 0.26
KNTC1-208ENST00000535410 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 NINLQ9Y2I6 1382 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 USP35Q9P2H5 1018 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 ZRANB1Q9UGI0 708 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
KNTC1-208ENST00000535410 TMF1P82094 1093 aa16.65■□□□□ 0.26
KNTC1-208ENST00000535410 PDE3BQ13370 1112 aa16.65■□□□□ 0.26
KNTC1-208ENST00000535410 LARP1Q6PKG0 1096 aaKnown RBP16.65■□□□□ 0.26
KNTC1-208ENST00000535410 PHRF1Q9P1Y6 1649 aaKnown RBP16.65■□□□□ 0.26
KNTC1-208ENST00000535410 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
KNTC1-208ENST00000535410 C11orf95C9JLR9 678 aaPredicted RBP16.64■□□□□ 0.25
KNTC1-208ENST00000535410 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.64■□□□□ 0.25
KNTC1-208ENST00000535410 TESK2Q96S53 571 aa16.64■□□□□ 0.25
KNTC1-208ENST00000535410 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
KNTC1-208ENST00000535410 FAM196AQ6ZSG2 479 aa16.63■□□□□ 0.25
KNTC1-208ENST00000535410 NRKQ7Z2Y5 1582 aa16.63■□□□□ 0.25
KNTC1-208ENST00000535410 BAG6P46379 1132 aa16.62■□□□□ 0.25
KNTC1-208ENST00000535410 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
KNTC1-208ENST00000535410 CAMTA1Q9Y6Y1 1673 aa16.62■□□□□ 0.25
KNTC1-208ENST00000535410 SLIT3O75094 1523 aa16.61■□□□□ 0.25
KNTC1-208ENST00000535410 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
KNTC1-208ENST00000535410 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
KNTC1-208ENST00000535410 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
KNTC1-208ENST00000535410 USP31Q70CQ4 1352 aa16.61■□□□□ 0.25
KNTC1-208ENST00000535410 SOX12O15370 315 aa16.6■□□□□ 0.25
KNTC1-208ENST00000535410 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
KNTC1-208ENST00000535410 CDCA7Q9BWT1 371 aaPredicted RBP16.6■□□□□ 0.25
KNTC1-208ENST00000535410 USP47Q96K76 1375 aa16.6■□□□□ 0.25
KNTC1-208ENST00000535410 CRB1P82279 1406 aa16.6■□□□□ 0.25
KNTC1-208ENST00000535410 EDC4Q6P2E9 1401 aaKnown RBP16.6■□□□□ 0.25
KNTC1-208ENST00000535410 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms