RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 SRPK2P78362 688 aaKnown RBP13.48□□□□□ -0.25
CDCA3-204ENST00000535406 NBPF8Q3BBV2 869 aa13.48□□□□□ -0.25
CDCA3-204ENST00000535406 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
CDCA3-204ENST00000535406 USP21Q9UK80 565 aa13.48□□□□□ -0.25
CDCA3-204ENST00000535406 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
CDCA3-204ENST00000535406 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
CDCA3-204ENST00000535406 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
CDCA3-204ENST00000535406 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
CDCA3-204ENST00000535406 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
CDCA3-204ENST00000535406 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
CDCA3-204ENST00000535406 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
CDCA3-204ENST00000535406 ATRNO75882 1429 aa13.46□□□□□ -0.26
CDCA3-204ENST00000535406 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
CDCA3-204ENST00000535406 PLCH1Q4KWH8 1693 aa13.46□□□□□ -0.26
CDCA3-204ENST00000535406 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
CDCA3-204ENST00000535406 CABP2Q9NPB3 220 aa13.45□□□□□ -0.26
CDCA3-204ENST00000535406 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
CDCA3-204ENST00000535406 BCL9LQ86UU0 1499 aa13.45□□□□□ -0.26
CDCA3-204ENST00000535406 CRYBG1Q9Y4K1 1723 aa13.45□□□□□ -0.26
CDCA3-204ENST00000535406 RGS12O14924 1447 aa13.45□□□□□ -0.26
CDCA3-204ENST00000535406 ACEP12821 1306 aa13.44□□□□□ -0.26
CDCA3-204ENST00000535406 EVC2Q86UK5 1308 aa13.44□□□□□ -0.26
CDCA3-204ENST00000535406 SLIT2O94813 1529 aa13.44□□□□□ -0.26
CDCA3-204ENST00000535406 CARD11Q9BXL7 1154 aa13.44□□□□□ -0.26
CDCA3-204ENST00000535406 NWD2Q9ULI1 1742 aa13.44□□□□□ -0.26
CDCA3-204ENST00000535406 PLEKHG3A1L390 1219 aa13.43□□□□□ -0.26
CDCA3-204ENST00000535406 PHRF1Q9P1Y6 1649 aaKnown RBP13.42□□□□□ -0.26
CDCA3-204ENST00000535406 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
CDCA3-204ENST00000535406 UNC5CLQ8IV45 518 aa13.41□□□□□ -0.26
CDCA3-204ENST00000535406 PCGF6Q9BYE7 350 aa13.41□□□□□ -0.26
CDCA3-204ENST00000535406 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
CDCA3-204ENST00000535406 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-204ENST00000535406 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
CDCA3-204ENST00000535406 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
CDCA3-204ENST00000535406 USP6P35125 1406 aa13.39□□□□□ -0.27
CDCA3-204ENST00000535406 GJD4Q96KN9 370 aaPredicted RBP13.39□□□□□ -0.27
CDCA3-204ENST00000535406 CABP1Q9NZU7 370 aa13.39□□□□□ -0.27
CDCA3-204ENST00000535406 BRD4O60885 1362 aaPredicted RBP13.38□□□□□ -0.27
CDCA3-204ENST00000535406 GLI3P10071 1580 aa13.38□□□□□ -0.27
CDCA3-204ENST00000535406 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
CDCA3-204ENST00000535406 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
CDCA3-204ENST00000535406 NUTM2GQ5VZR2 741 aa13.38□□□□□ -0.27
CDCA3-204ENST00000535406 ABTB2Q8N961 1025 aa13.38□□□□□ -0.27
CDCA3-204ENST00000535406 AKAP12Q02952 1782 aa13.37□□□□□ -0.27
CDCA3-204ENST00000535406 FAM83GA6ND36 823 aa13.37□□□□□ -0.27
CDCA3-204ENST00000535406 VPS72Q15906 364 aa13.36□□□□□ -0.27
CDCA3-204ENST00000535406 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
CDCA3-204ENST00000535406 USP19O94966 1318 aa13.35□□□□□ -0.27
CDCA3-204ENST00000535406 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
CDCA3-204ENST00000535406 BTG4Q9NY30 223 aa13.35□□□□□ -0.27
CDCA3-204ENST00000535406 CCDC9Q9Y3X0 531 aaKnown RBP13.35□□□□□ -0.27
CDCA3-204ENST00000535406 PIK3C2AO00443 1686 aa13.35□□□□□ -0.27
CDCA3-204ENST00000535406 NLRP13Q86W25 1043 aa13.34□□□□□ -0.27
CDCA3-204ENST00000535406 UPF1Q92900 1129 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDCA3-204ENST00000535406 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
CDCA3-204ENST00000535406 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
CDCA3-204ENST00000535406 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
CDCA3-204ENST00000535406 SLIT3O75094 1523 aa13.32□□□□□ -0.28
CDCA3-204ENST00000535406 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
CDCA3-204ENST00000535406 ZC3H6P61129 1189 aaKnown RBP13.32□□□□□ -0.28
CDCA3-204ENST00000535406 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-204ENST00000535406 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
CDCA3-204ENST00000535406 EP400Q96L91 3159 aa13.32□□□□□ -0.28
CDCA3-204ENST00000535406 CPDO75976 1380 aa13.31□□□□□ -0.28
CDCA3-204ENST00000535406 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
CDCA3-204ENST00000535406 USP47Q96K76 1375 aa13.31□□□□□ -0.28
CDCA3-204ENST00000535406 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
CDCA3-204ENST00000535406 CHRNA2Q15822 529 aa13.31□□□□□ -0.28
CDCA3-204ENST00000535406 LMO7Q8WWI1 1683 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 NLRP6P59044 892 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 CCER1Q8TC90 406 aaPredicted RBP13.3□□□□□ -0.28
CDCA3-204ENST00000535406 TESK2Q96S53 571 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 BRWD3Q6RI45 1802 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
CDCA3-204ENST00000535406 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
CDCA3-204ENST00000535406 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
CDCA3-204ENST00000535406 GCP02774 474 aa13.29□□□□□ -0.28
CDCA3-204ENST00000535406 TMC1Q8TDI8 760 aa13.29□□□□□ -0.28
CDCA3-204ENST00000535406 A0A0G2JS52 829 aa13.28□□□□□ -0.28
CDCA3-204ENST00000535406 MYT1Q01538 1121 aa13.28□□□□□ -0.28
CDCA3-204ENST00000535406 FKBP8Q14318 412 aa13.28□□□□□ -0.28
CDCA3-204ENST00000535406 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
CDCA3-204ENST00000535406 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
CDCA3-204ENST00000535406 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
CDCA3-204ENST00000535406 CAMTA1Q9Y6Y1 1673 aa13.27□□□□□ -0.28
CDCA3-204ENST00000535406 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
CDCA3-204ENST00000535406 SPATA31A5Q5VU36 1347 aa13.27□□□□□ -0.29
CDCA3-204ENST00000535406 SPATA31A7Q8IWB4 1347 aa13.27□□□□□ -0.29
CDCA3-204ENST00000535406 NINLQ9Y2I6 1382 aa13.27□□□□□ -0.29
CDCA3-204ENST00000535406 USP54Q70EL1 1684 aa13.27□□□□□ -0.29
CDCA3-204ENST00000535406 THSD7AQ9UPZ6 1657 aa13.27□□□□□ -0.29
CDCA3-204ENST00000535406 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
CDCA3-204ENST00000535406 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
CDCA3-204ENST00000535406 A0A1W2PP64 1363 aa13.26□□□□□ -0.29
CDCA3-204ENST00000535406 EDC4Q6P2E9 1401 aaKnown RBP13.26□□□□□ -0.29
CDCA3-204ENST00000535406 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
CDCA3-204ENST00000535406 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
CDCA3-204ENST00000535406 TMF1P82094 1093 aa13.25□□□□□ -0.29
CDCA3-204ENST00000535406 SLC12A5Q9H2X9 1139 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms