RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 NRKQ7Z2Y5 1582 aa28.65■■■□□ 2.18
CHFR-209ENST00000535181 LRP6O75581 1613 aa28.64■■■□□ 2.18
CHFR-209ENST00000535181 MYOM1P52179 1685 aa28.64■■■□□ 2.17
CHFR-209ENST00000535181 TERF2IPQ9NYB0 399 aa28.63■■■□□ 2.17
CHFR-209ENST00000535181 KTN1Q86UP2 1357 aaKnown RBP28.62■■■□□ 2.17
CHFR-209ENST00000535181 HDGFL2Q7Z4V5 671 aaPredicted RBP28.61■■■□□ 2.17
CHFR-209ENST00000535181 A0A1W2PP64 1363 aa28.61■■■□□ 2.17
CHFR-209ENST00000535181 PAK3O75914 559 aaPredicted RBP28.6■■■□□ 2.17
CHFR-209ENST00000535181 ANKRD36BQ8N2N9 1353 aa28.6■■■□□ 2.17
CHFR-209ENST00000535181 ABCA3Q99758 1704 aa28.59■■■□□ 2.17
CHFR-209ENST00000535181 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
CHFR-209ENST00000535181 TTC21AQ8NDW8 1320 aa28.57■■■□□ 2.16
CHFR-209ENST00000535181 EDC4Q6P2E9 1401 aaKnown RBP28.57■■■□□ 2.16
CHFR-209ENST00000535181 LMOD2Q6P5Q4 547 aa28.56■■■□□ 2.16
CHFR-209ENST00000535181 TTC21BQ7Z4L5 1316 aa28.56■■■□□ 2.16
CHFR-209ENST00000535181 PIK3C2AO00443 1686 aa28.54■■■□□ 2.16
CHFR-209ENST00000535181 NUTM2BA6NNL0 878 aaPredicted RBP28.54■■■□□ 2.16
CHFR-209ENST00000535181 NUTM2EB1AL46 878 aaPredicted RBP28.54■■■□□ 2.16
CHFR-209ENST00000535181 NUTM2AQ8IVF1 878 aaPredicted RBP28.54■■■□□ 2.16
CHFR-209ENST00000535181 C11orf95C9JLR9 678 aaPredicted RBP28.53■■■□□ 2.16
CHFR-209ENST00000535181 ABTB2Q8N961 1025 aa28.53■■■□□ 2.16
CHFR-209ENST00000535181 MARF1Q9Y4F3 1742 aaKnown RBP28.52■■■□□ 2.16
CHFR-209ENST00000535181 PHRF1Q9P1Y6 1649 aaKnown RBP28.51■■■□□ 2.15
CHFR-209ENST00000535181 USP54Q70EL1 1684 aa28.51■■■□□ 2.15
CHFR-209ENST00000535181 USP19O94966 1318 aa28.5■■■□□ 2.15
CHFR-209ENST00000535181 KIF7Q2M1P5 1343 aa28.49■■■□□ 2.15
CHFR-209ENST00000535181 NLRP13Q86W25 1043 aa28.49■■■□□ 2.15
CHFR-209ENST00000535181 MEX3CQ5U5Q3 659 aaKnown RBP28.48■■■□□ 2.15
CHFR-209ENST00000535181 CABLES1Q8TDN4 633 aa28.47■■■□□ 2.15
CHFR-209ENST00000535181 USP31Q70CQ4 1352 aa28.47■■■□□ 2.15
CHFR-209ENST00000535181 SLIT3O75094 1523 aa28.46■■■□□ 2.15
CHFR-209ENST00000535181 POLR3GLQ9BT43 218 aa28.45■■■□□ 2.14
CHFR-209ENST00000535181 ADAMTS2O95450 1211 aa28.44■■■□□ 2.14
CHFR-209ENST00000535181 HAP1P54257 671 aaPredicted RBP28.44■■■□□ 2.14
CHFR-209ENST00000535181 NLRP6P59044 892 aa28.44■■■□□ 2.14
CHFR-209ENST00000535181 NUTM2GQ5VZR2 741 aa28.44■■■□□ 2.14
CHFR-209ENST00000535181 CCDC7Q96M83 1385 aa28.44■■■□□ 2.14
CHFR-209ENST00000535181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.43■■■□□ 2.14
CHFR-209ENST00000535181 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
CHFR-209ENST00000535181 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
CHFR-209ENST00000535181 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
CHFR-209ENST00000535181 OVOS2A0A0J9YW53 1432 aa28.4■■■□□ 2.14
CHFR-209ENST00000535181 OVOS2Q6IE36 1432 aa28.4■■■□□ 2.14
CHFR-209ENST00000535181 NME9Q86XW9 330 aa28.39■■■□□ 2.14
CHFR-209ENST00000535181 C8orf37Q96NL8 207 aa28.39■■■□□ 2.14
CHFR-209ENST00000535181 NSD3Q9BZ95 1437 aa28.39■■■□□ 2.14
CHFR-209ENST00000535181 FNBP4Q8N3X1 1017 aaPredicted RBP28.38■■■□□ 2.13
CHFR-209ENST00000535181 CPDO75976 1380 aa28.37■■■□□ 2.13
CHFR-209ENST00000535181 PLEKHG5O94827 1062 aa28.37■■■□□ 2.13
CHFR-209ENST00000535181 GCP02774 474 aa28.37■■■□□ 2.13
CHFR-209ENST00000535181 COL14A1Q05707 1796 aaKnown RBP28.37■■■□□ 2.13
CHFR-209ENST00000535181 KIF20BQ96Q89 1820 aa28.36■■■□□ 2.13
CHFR-209ENST00000535181 NGLY1Q96IV0 654 aa28.36■■■□□ 2.13
CHFR-209ENST00000535181 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
CHFR-209ENST00000535181 SLIT2O94813 1529 aa28.36■■■□□ 2.13
CHFR-209ENST00000535181 AFF2P51816 1311 aa28.36■■■□□ 2.13
CHFR-209ENST00000535181 NWD2Q9ULI1 1742 aa28.35■■■□□ 2.13
CHFR-209ENST00000535181 KCNH5Q8NCM2 988 aa28.35■■■□□ 2.13
CHFR-209ENST00000535181 PANK3Q9H999 370 aa28.35■■■□□ 2.13
CHFR-209ENST00000535181 NFAT5O94916 1531 aa28.34■■■□□ 2.13
CHFR-209ENST00000535181 ZNF772Q68DY9 489 aaPredicted RBP28.34■■■□□ 2.13
CHFR-209ENST00000535181 PLCH1Q4KWH8 1693 aa28.34■■■□□ 2.13
CHFR-209ENST00000535181 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.33■■■□□ 2.13
CHFR-209ENST00000535181 KIAA0232Q92628 1395 aa28.33■■■□□ 2.13
CHFR-209ENST00000535181 FYB1O15117 783 aa28.32■■■□□ 2.12
CHFR-209ENST00000535181 ZRANB1Q9UGI0 708 aa28.32■■■□□ 2.12
CHFR-209ENST00000535181 FAM83GA6ND36 823 aa28.31■■■□□ 2.12
CHFR-209ENST00000535181 BCL9LQ86UU0 1499 aa28.3■■■□□ 2.12
CHFR-209ENST00000535181 CGNL1Q0VF96 1302 aa28.3■■■□□ 2.12
CHFR-209ENST00000535181 PRDM11Q9NQV5 511 aa28.3■■■□□ 2.12
CHFR-209ENST00000535181 COG3Q96JB2 828 aa28.29■■■□□ 2.12
CHFR-209ENST00000535181 ZC3H6P61129 1189 aaKnown RBP28.28■■■□□ 2.12
CHFR-209ENST00000535181 LMO7Q8WWI1 1683 aa28.28■■■□□ 2.12
CHFR-209ENST00000535181 USP21Q9UK80 565 aa28.27■■■□□ 2.12
CHFR-209ENST00000535181 ABCC6O95255 1503 aa28.27■■■□□ 2.12
CHFR-209ENST00000535181 NRAPQ86VF7 1730 aa28.26■■■□□ 2.12
CHFR-209ENST00000535181 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.11
CHFR-209ENST00000535181 NSD2O96028 1365 aa28.25■■■□□ 2.11
CHFR-209ENST00000535181 GGNBP2Q9H3C7 697 aa28.25■■■□□ 2.11
CHFR-209ENST00000535181 AATKQ6ZMQ8 1374 aa28.24■■■□□ 2.11
CHFR-209ENST00000535181 ARHGEF25Q86VW2 580 aa28.24■■■□□ 2.11
CHFR-209ENST00000535181 UNC5CLQ8IV45 518 aa28.24■■■□□ 2.11
CHFR-209ENST00000535181 ATRNO75882 1429 aa28.24■■■□□ 2.11
CHFR-209ENST00000535181 COL18A1P39060 1754 aa28.23■■■□□ 2.11
CHFR-209ENST00000535181 POTEAQ6S8J7 498 aa28.22■■■□□ 2.11
CHFR-209ENST00000535181 KNSTRNQ9Y448 316 aa28.22■■■□□ 2.11
CHFR-209ENST00000535181 CHRNA2Q15822 529 aa28.21■■■□□ 2.11
CHFR-209ENST00000535181 BTG4Q9NY30 223 aa28.21■■■□□ 2.11
CHFR-209ENST00000535181 TRPC5Q9UL62 973 aaPredicted RBP28.21■■■□□ 2.11
CHFR-209ENST00000535181 LTN1O94822 1766 aa28.2■■■□□ 2.11
CHFR-209ENST00000535181 PER1O15534 1290 aaPredicted RBP28.2■■■□□ 2.1
CHFR-209ENST00000535181 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
CHFR-209ENST00000535181 SOX12O15370 315 aa28.19■■■□□ 2.1
CHFR-209ENST00000535181 QTRT2Q9H974 415 aaKnown RBP28.18■■■□□ 2.1
CHFR-209ENST00000535181 VPS72Q15906 364 aa28.16■■■□□ 2.1
CHFR-209ENST00000535181 AMER1Q5JTC6 1135 aaPredicted RBP28.16■■■□□ 2.1
CHFR-209ENST00000535181 NPC1L1Q9UHC9 1359 aa28.15■■■□□ 2.1
CHFR-209ENST00000535181 COL5A2P05997 1499 aaPredicted RBP28.15■■■□□ 2.1
CHFR-209ENST00000535181 RBM6P78332 1123 aaKnown RBP28.13■■■□□ 2.09
CHFR-209ENST00000535181 CDK12Q9NYV4 1490 aaPredicted RBP28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms