RNA–Protein interactions for RNA: ENST00000534477.5

LINC00958-207, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 888 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-207ENST00000534477 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.515e-7■■□□□ 11.6
LINC00958-207ENST00000534477 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
LINC00958-207ENST00000534477 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
LINC00958-207ENST00000534477 CDK12Q9NYV4 1490 aaPredicted RBP11.84□□□□□ -0.51
LINC00958-207ENST00000534477 HAX1O00165 279 aa11.84□□□□□ -0.51
LINC00958-207ENST00000534477 ZNF467Q7Z7K2 595 aaPredicted RBP11.84□□□□□ -0.51
LINC00958-207ENST00000534477 CDC42BPGQ6DT37 1551 aa11.84□□□□□ -0.51
LINC00958-207ENST00000534477 ANKRD30BQ9BXX2 1392 aa11.83□□□□□ -0.52
LINC00958-207ENST00000534477 TRPC5Q9UL62 973 aaPredicted RBP11.83□□□□□ -0.52
LINC00958-207ENST00000534477 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
LINC00958-207ENST00000534477 LRPPRCP42704 1394 aaKnown RBP11.82□□□□□ -0.52
LINC00958-207ENST00000534477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.82□□□□□ -0.52
LINC00958-207ENST00000534477 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
LINC00958-207ENST00000534477 VSIG10Q8N0Z9 540 aa11.82□□□□□ -0.52
LINC00958-207ENST00000534477 ZFP91Q96JP5 570 aaPredicted RBP11.82□□□□□ -0.52
LINC00958-207ENST00000534477 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
LINC00958-207ENST00000534477 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
LINC00958-207ENST00000534477 LAMC1P11047 1609 aa11.82□□□□□ -0.52
LINC00958-207ENST00000534477 PIK3C2GO75747 1445 aa11.8□□□□□ -0.52
LINC00958-207ENST00000534477 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
LINC00958-207ENST00000534477 YTHDC2Q9H6S0 1430 aaKnown RBP11.8□□□□□ -0.52
LINC00958-207ENST00000534477 CFAP70Q5T0N1 1121 aa11.8□□□□□ -0.52
LINC00958-207ENST00000534477 BCL11BQ9C0K0 894 aaPredicted RBP11.8□□□□□ -0.52
LINC00958-207ENST00000534477 STK24Q9Y6E0 443 aa11.8□□□□□ -0.52
LINC00958-207ENST00000534477 PXDNQ92626 1479 aa11.8□□□□□ -0.52
LINC00958-207ENST00000534477 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
LINC00958-207ENST00000534477 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
LINC00958-207ENST00000534477 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
LINC00958-207ENST00000534477 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
LINC00958-207ENST00000534477 MYOM2P54296 1465 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 KRT28Q7Z3Y7 464 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 POGKQ9P215 609 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 CCDC9Q9Y3X0 531 aaKnown RBP11.78□□□□□ -0.52
LINC00958-207ENST00000534477 DHX57Q6P158 1386 aaKnown RBP11.78□□□□□ -0.52
LINC00958-207ENST00000534477 ABCC11Q96J66 1382 aa11.78□□□□□ -0.52
LINC00958-207ENST00000534477 TECPR2O15040 1411 aa11.77□□□□□ -0.52
LINC00958-207ENST00000534477 ATRNO75882 1429 aa11.77□□□□□ -0.52
LINC00958-207ENST00000534477 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.52
LINC00958-207ENST00000534477 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
LINC00958-207ENST00000534477 CABLES1Q8TDN4 633 aa11.77□□□□□ -0.53
LINC00958-207ENST00000534477 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
LINC00958-207ENST00000534477 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 A0A0G2JS52 829 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 MYT1Q01538 1121 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 PMFBP1Q8TBY8 1022 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 HIRIP3Q9BW71 556 aaPredicted RBP11.76□□□□□ -0.53
LINC00958-207ENST00000534477 C14orf93Q9H972 538 aaKnown RBP11.76□□□□□ -0.53
LINC00958-207ENST00000534477 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
LINC00958-207ENST00000534477 PSME1Q06323 249 aa11.75□□□□□ -0.53
LINC00958-207ENST00000534477 NKX1-1Q15270 411 aaPredicted RBP11.75□□□□□ -0.53
LINC00958-207ENST00000534477 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
LINC00958-207ENST00000534477 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
LINC00958-207ENST00000534477 PDAP1Q13442 181 aaKnown RBP11.74□□□□□ -0.53
LINC00958-207ENST00000534477 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
LINC00958-207ENST00000534477 TRAK1Q9UPV9 953 aa11.74□□□□□ -0.53
LINC00958-207ENST00000534477 MINK1Q8N4C8 1332 aaPredicted RBP11.74□□□□□ -0.53
LINC00958-207ENST00000534477 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
LINC00958-207ENST00000534477 TNS3Q68CZ2 1445 aa11.73□□□□□ -0.53
LINC00958-207ENST00000534477 UNC5CLQ8IV45 518 aa11.73□□□□□ -0.53
LINC00958-207ENST00000534477 RYDENQ9NUL5 291 aaKnown RBP11.73□□□□□ -0.53
LINC00958-207ENST00000534477 USP32Q8NFA0 1604 aa11.72□□□□□ -0.53
LINC00958-207ENST00000534477 DCAF11Q8TEB1 546 aa11.72□□□□□ -0.53
LINC00958-207ENST00000534477 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
LINC00958-207ENST00000534477 CD44P16070 742 aaKnown RBP11.71□□□□□ -0.53
LINC00958-207ENST00000534477 PCDHB8Q9UN66 801 aa11.71□□□□□ -0.53
LINC00958-207ENST00000534477 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
LINC00958-207ENST00000534477 C19orf67A6NJJ6 358 aa11.7□□□□□ -0.54
LINC00958-207ENST00000534477 ZRANB1Q9UGI0 708 aa11.7□□□□□ -0.54
LINC00958-207ENST00000534477 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
LINC00958-207ENST00000534477 PLCH1Q4KWH8 1693 aa11.69□□□□□ -0.54
LINC00958-207ENST00000534477 ACIN1Q9UKV3 1341 aaKnown RBP11.69□□□□□ -0.54
LINC00958-207ENST00000534477 SIRT1Q96EB6 747 aa11.69□□□□□ -0.54
LINC00958-207ENST00000534477 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
LINC00958-207ENST00000534477 GLI3P10071 1580 aa11.69□□□□□ -0.54
LINC00958-207ENST00000534477 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
LINC00958-207ENST00000534477 EVX2Q03828 476 aa11.68□□□□□ -0.54
LINC00958-207ENST00000534477 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
LINC00958-207ENST00000534477 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
LINC00958-207ENST00000534477 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
LINC00958-207ENST00000534477 SLIT2O94813 1529 aa11.68□□□□□ -0.54
LINC00958-207ENST00000534477 ARHGEF10O15013 1369 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 GPRASP1Q5JY77 1395 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 ABCA3Q99758 1704 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
LINC00958-207ENST00000534477 PSEN1P49768 467 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 SBNO1A3KN83 1393 aa11.67□□□□□ -0.54
LINC00958-207ENST00000534477 DLC1Q96QB1 1528 aa11.66□□□□□ -0.54
LINC00958-207ENST00000534477 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
LINC00958-207ENST00000534477 KIF12Q96FN5 646 aa11.66□□□□□ -0.54
LINC00958-207ENST00000534477 ANKARQ7Z5J8 1434 aa11.66□□□□□ -0.54
LINC00958-207ENST00000534477 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
LINC00958-207ENST00000534477 FAM83GA6ND36 823 aa11.65□□□□□ -0.54
LINC00958-207ENST00000534477 MAP3K13O43283 966 aa11.65□□□□□ -0.54
LINC00958-207ENST00000534477 VPS72Q15906 364 aa11.65□□□□□ -0.54
LINC00958-207ENST00000534477 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
LINC00958-207ENST00000534477 BTG4Q9NY30 223 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms