RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, human

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-210	ENST00000534406	SLC12A5	Q9H2X9	1139 aa		33.68	■■■□□ 2.98
SIPA1-210	ENST00000534406	LMOD2	Q6P5Q4	547 aa		33.67	■■■□□ 2.98
SIPA1-210	ENST00000534406	ZNF692	Q9BU19	519 aa	Predicted RBP	33.67	■■■□□ 2.98
SIPA1-210	ENST00000534406	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.66	■■■□□ 2.98
SIPA1-210	ENST00000534406	KTN1	Q86UP2	1357 aa	Known RBP	33.66	■■■□□ 2.98
SIPA1-210	ENST00000534406	LRP6	O75581	1613 aa		33.65	■■■□□ 2.98
SIPA1-210	ENST00000534406		A0A1W2PP64	1363 aa		33.65	■■■□□ 2.98
SIPA1-210	ENST00000534406	TERF2IP	Q9NYB0	399 aa		33.65	■■■□□ 2.98
SIPA1-210	ENST00000534406	ABCA3	Q99758	1704 aa		33.64	■■■□□ 2.98
SIPA1-210	ENST00000534406	SSH2	Q76I76	1423 aa		33.63	■■■□□ 2.97
SIPA1-210	ENST00000534406	POLR3GL	Q9BT43	218 aa		33.62	■■■□□ 2.97
SIPA1-210	ENST00000534406	ANKRD36B	Q8N2N9	1353 aa		33.61	■■■□□ 2.97
SIPA1-210	ENST00000534406	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.61	■■■□□ 2.97
SIPA1-210	ENST00000534406	NUTM2E	B1AL46	878 aa	Predicted RBP	33.61	■■■□□ 2.97
SIPA1-210	ENST00000534406	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.61	■■■□□ 2.97
SIPA1-210	ENST00000534406	EDC4	Q6P2E9	1401 aa	Known RBP	33.59	■■■□□ 2.97
SIPA1-210	ENST00000534406	PIK3C2A	O00443	1686 aa		33.58	■■■□□ 2.97
SIPA1-210	ENST00000534406	CRYBG1	Q9Y4K1	1723 aa		33.58	■■■□□ 2.97
SIPA1-210	ENST00000534406	TTC21B	Q7Z4L5	1316 aa		33.56	■■■□□ 2.96
SIPA1-210	ENST00000534406	TTC21A	Q8NDW8	1320 aa		33.56	■■■□□ 2.96
SIPA1-210	ENST00000534406	C11orf95	C9JLR9	678 aa	Predicted RBP	33.56	■■■□□ 2.96
SIPA1-210	ENST00000534406	ABTB2	Q8N961	1025 aa		33.55	■■■□□ 2.96
SIPA1-210	ENST00000534406	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.54	■■■□□ 2.96
SIPA1-210	ENST00000534406	KIF7	Q2M1P5	1343 aa		33.53	■■■□□ 2.96
SIPA1-210	ENST00000534406	MARF1	Q9Y4F3	1742 aa	Known RBP	33.53	■■■□□ 2.96
SIPA1-210	ENST00000534406	MEX3C	Q5U5Q3	659 aa	Known RBP	33.53	■■■□□ 2.96
SIPA1-210	ENST00000534406	PLEKHG5	O94827	1062 aa		33.52	■■■□□ 2.96
SIPA1-210	ENST00000534406	HAP1	P54257	671 aa	Predicted RBP	33.51	■■■□□ 2.95
SIPA1-210	ENST00000534406	NUTM2G	Q5VZR2	741 aa		33.51	■■■□□ 2.95
SIPA1-210	ENST00000534406	CABLES1	Q8TDN4	633 aa		33.5	■■■□□ 2.95
SIPA1-210	ENST00000534406	ADAMTS2	O95450	1211 aa		33.48	■■■□□ 2.95
SIPA1-210	ENST00000534406	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	33.48	■■■□□ 2.95
SIPA1-210	ENST00000534406	USP54	Q70EL1	1684 aa		33.48	■■■□□ 2.95
SIPA1-210	ENST00000534406	USP19	O94966	1318 aa		33.48	■■■□□ 2.95
SIPA1-210	ENST00000534406	CCDC7	Q96M83	1385 aa		33.47	■■■□□ 2.95
SIPA1-210	ENST00000534406	NLRP13	Q86W25	1043 aa		33.47	■■■□□ 2.95
SIPA1-210	ENST00000534406	NLRP6	P59044	892 aa		33.45	■■■□□ 2.95
SIPA1-210	ENST00000534406	SLIT3	O75094	1523 aa		33.44	■■■□□ 2.94
SIPA1-210	ENST00000534406	PHF23	Q9BUL5	403 aa	Predicted RBP	33.44	■■■□□ 2.94
SIPA1-210	ENST00000534406	NSD3	Q9BZ95	1437 aa		33.43	■■■□□ 2.94
SIPA1-210	ENST00000534406	NME9	Q86XW9	330 aa		33.42	■■■□□ 2.94
SIPA1-210	ENST00000534406	WASHC2A	Q641Q2	1341 aa		33.42	■■■□□ 2.94
SIPA1-210	ENST00000534406	KIF20B	Q96Q89	1820 aa		33.42	■■■□□ 2.94
SIPA1-210	ENST00000534406	USP31	Q70CQ4	1352 aa		33.41	■■■□□ 2.94
SIPA1-210	ENST00000534406	C8orf37	Q96NL8	207 aa		33.4	■■■□□ 2.94
SIPA1-210	ENST00000534406	OVOS2	A0A0J9YW53	1432 aa		33.37	■■■□□ 2.93
SIPA1-210	ENST00000534406	OVOS2	Q6IE36	1432 aa		33.37	■■■□□ 2.93
SIPA1-210	ENST00000534406	CARD14	Q9BXL6	1004 aa		33.37	■■■□□ 2.93
SIPA1-210	ENST00000534406	PANK3	Q9H999	370 aa		33.36	■■■□□ 2.93
SIPA1-210	ENST00000534406	PLCH1	Q4KWH8	1693 aa		33.35	■■■□□ 2.93
SIPA1-210	ENST00000534406	AFF2	P51816	1311 aa		33.34	■■■□□ 2.93
SIPA1-210	ENST00000534406	NGLY1	Q96IV0	654 aa		33.34	■■■□□ 2.93
SIPA1-210	ENST00000534406	ZRANB1	Q9UGI0	708 aa		33.34	■■■□□ 2.93
SIPA1-210	ENST00000534406	COL14A1	Q05707	1796 aa	Known RBP	33.34	■■■□□ 2.93
SIPA1-210	ENST00000534406	GC	P02774	474 aa		33.33	■■■□□ 2.93
SIPA1-210	ENST00000534406	NFAT5	O94916	1531 aa		33.32	■■■□□ 2.92
SIPA1-210	ENST00000534406	KIAA0232	Q92628	1395 aa		33.32	■■■□□ 2.92
SIPA1-210	ENST00000534406	KCNH5	Q8NCM2	988 aa		33.3	■■■□□ 2.92
SIPA1-210	ENST00000534406	PRDM11	Q9NQV5	511 aa		33.3	■■■□□ 2.92
SIPA1-210	ENST00000534406	CPD	O75976	1380 aa		33.3	■■■□□ 2.92
SIPA1-210	ENST00000534406	NWD2	Q9ULI1	1742 aa		33.3	■■■□□ 2.92
SIPA1-210	ENST00000534406	CGNL1	Q0VF96	1302 aa		33.29	■■■□□ 2.92
SIPA1-210	ENST00000534406	ZC3H6	P61129	1189 aa	Known RBP	33.29	■■■□□ 2.92
SIPA1-210	ENST00000534406	COG3	Q96JB2	828 aa		33.29	■■■□□ 2.92
SIPA1-210	ENST00000534406	SLIT2	O94813	1529 aa		33.28	■■■□□ 2.92
SIPA1-210	ENST00000534406	FYB1	O15117	783 aa		33.28	■■■□□ 2.92
SIPA1-210	ENST00000534406	FNBP4	Q8N3X1	1017 aa	Predicted RBP	33.27	■■■□□ 2.92
SIPA1-210	ENST00000534406	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	33.27	■■■□□ 2.92
SIPA1-210	ENST00000534406	ZNF772	Q68DY9	489 aa	Predicted RBP	33.26	■■■□□ 2.91
SIPA1-210	ENST00000534406	GGNBP2	Q9H3C7	697 aa		33.26	■■■□□ 2.91
SIPA1-210	ENST00000534406	ANKRD26	Q9UPS8	1709 aa		33.25	■■■□□ 2.91
SIPA1-210	ENST00000534406	SOX12	O15370	315 aa		33.25	■■■□□ 2.91
SIPA1-210	ENST00000534406	RGS17	Q9UGC6	210 aa	Predicted RBP	33.25	■■■□□ 2.91
SIPA1-210	ENST00000534406	FAM83G	A6ND36	823 aa		33.24	■■■□□ 2.91
SIPA1-210	ENST00000534406	NRAP	Q86VF7	1730 aa		33.23	■■■□□ 2.91
SIPA1-210	ENST00000534406	USP21	Q9UK80	565 aa		33.23	■■■□□ 2.91
SIPA1-210	ENST00000534406	BCL9L	Q86UU0	1499 aa		33.22	■■■□□ 2.91
SIPA1-210	ENST00000534406	LMO7	Q8WWI1	1683 aa		33.22	■■■□□ 2.91
SIPA1-210	ENST00000534406	CHRNA2	Q15822	529 aa		33.21	■■■□□ 2.91
SIPA1-210	ENST00000534406	LTN1	O94822	1766 aa		33.21	■■■□□ 2.91
SIPA1-210	ENST00000534406	NSD2	O96028	1365 aa		33.21	■■■□□ 2.91
SIPA1-210	ENST00000534406	KNSTRN	Q9Y448	316 aa		33.2	■■■□□ 2.91
SIPA1-210	ENST00000534406	ABCC6	O95255	1503 aa		33.18	■■■□□ 2.9
SIPA1-210	ENST00000534406	ZBTB7C	A1YPR0	619 aa		33.18	■■■□□ 2.9
SIPA1-210	ENST00000534406	ARHGEF25	Q86VW2	580 aa		33.17	■■■□□ 2.9
SIPA1-210	ENST00000534406	AATK	Q6ZMQ8	1374 aa		33.17	■■■□□ 2.9
SIPA1-210	ENST00000534406	UNC5CL	Q8IV45	518 aa		33.16	■■■□□ 2.9
SIPA1-210	ENST00000534406	BTG4	Q9NY30	223 aa		33.16	■■■□□ 2.9
SIPA1-210	ENST00000534406	COL18A1	P39060	1754 aa		33.16	■■■□□ 2.9
SIPA1-210	ENST00000534406	ATRN	O75882	1429 aa		33.15	■■■□□ 2.9
SIPA1-210	ENST00000534406	POTEA	Q6S8J7	498 aa		33.14	■■■□□ 2.9
SIPA1-210	ENST00000534406	CAMTA1	Q9Y6Y1	1673 aa		33.13	■■■□□ 2.89
SIPA1-210	ENST00000534406	TRPC5	Q9UL62	973 aa	Predicted RBP	33.12	■■■□□ 2.89
SIPA1-210	ENST00000534406	PER1	O15534	1290 aa	Predicted RBP	33.1	■■■□□ 2.89
SIPA1-210	ENST00000534406	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.1	■■■□□ 2.89
SIPA1-210	ENST00000534406	QTRT2	Q9H974	415 aa	Known RBP	33.09	■■■□□ 2.89
SIPA1-210	ENST00000534406	COL5A2	P05997	1499 aa	Predicted RBP	33.09	■■■□□ 2.89
SIPA1-210	ENST00000534406	RGPD5	Q99666	1765 aa		33.08	■■■□□ 2.89
SIPA1-210	ENST00000534406	MAP3K19	Q56UN5	1328 aa		33.05	■■■□□ 2.88
SIPA1-210	ENST00000534406	VPS72	Q15906	364 aa		33.05	■■■□□ 2.88

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms