RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 YEATS2Q9ULM3 1422 aa24.2■■□□□ 1.46
SMPD1-210ENST00000534405 ARHGAP31Q2M1Z3 1444 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 RICTORQ6R327 1708 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 TRAK2O60296 914 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 IGHDP01880 384 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 RIPK4P57078 832 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 PANK1Q8TE04 598 aa24.19■■□□□ 1.46
SMPD1-210ENST00000534405 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
SMPD1-210ENST00000534405 PDE3AQ14432 1141 aa24.18■■□□□ 1.46
SMPD1-210ENST00000534405 STK26Q9P289 416 aa24.16■■□□□ 1.46
SMPD1-210ENST00000534405 COG6Q9Y2V7 657 aa24.16■■□□□ 1.46
SMPD1-210ENST00000534405 MYO5BQ9ULV0 1848 aa24.16■■□□□ 1.46
SMPD1-210ENST00000534405 OFD1O75665 1012 aa24.15■■□□□ 1.46
SMPD1-210ENST00000534405 SEC24BO95487 1268 aa24.14■■□□□ 1.45
SMPD1-210ENST00000534405 RARSP54136 660 aaKnown RBP24.14■■□□□ 1.45
SMPD1-210ENST00000534405 CFAP53Q96M91 514 aa24.14■■□□□ 1.45
SMPD1-210ENST00000534405 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
SMPD1-210ENST00000534405 A0A1W2PP64 1363 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 NSD2O96028 1365 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 CANXP27824 592 aaKnown RBP24.12■■□□□ 1.45
SMPD1-210ENST00000534405 WDR63Q8IWG1 891 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 CLUAP1Q96AJ1 413 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 TBC1D2Q9BYX2 928 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 TNNQ9UQP3 1299 aa24.12■■□□□ 1.45
SMPD1-210ENST00000534405 NINLQ9Y2I6 1382 aa24.11■■□□□ 1.45
SMPD1-210ENST00000534405 SLC52A1Q9NWF4 448 aa24.11■■□□□ 1.45
SMPD1-210ENST00000534405 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
SMPD1-210ENST00000534405 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
SMPD1-210ENST00000534405 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.1■■□□□ 1.45
SMPD1-210ENST00000534405 CCDC27Q2M243 656 aa24.1■■□□□ 1.45
SMPD1-210ENST00000534405 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
SMPD1-210ENST00000534405 BCL2L13Q9BXK5 485 aa24.09■■□□□ 1.45
SMPD1-210ENST00000534405 PREX1Q8TCU6 1659 aa24.09■■□□□ 1.45
SMPD1-210ENST00000534405 SRPK2P78362 688 aaKnown RBP24.09■■□□□ 1.45
SMPD1-210ENST00000534405 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
SMPD1-210ENST00000534405 PTPRMP28827 1452 aa24.08■■□□□ 1.45
SMPD1-210ENST00000534405 RLBP1P12271 317 aa24.08■■□□□ 1.45
SMPD1-210ENST00000534405 UTP14CQ5TAP6 766 aaKnown RBP24.08■■□□□ 1.45
SMPD1-210ENST00000534405 MTERF4Q7Z6M4 381 aaKnown RBP24.08■■□□□ 1.44
SMPD1-210ENST00000534405 GGNBP2Q9H3C7 697 aa24.07■■□□□ 1.44
SMPD1-210ENST00000534405 MINK1Q8N4C8 1332 aaPredicted RBP24.06■■□□□ 1.44
SMPD1-210ENST00000534405 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
SMPD1-210ENST00000534405 ADGRB2O60241 1585 aa24.06■■□□□ 1.44
SMPD1-210ENST00000534405 CHMP5Q9NZZ3 219 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 MAPK8IP3Q9UPT6 1336 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 DDX11L8A8MPP1 907 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 ZSCAN30Q86W11 494 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 TBC1D32Q96NH3 1257 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 PRAM1Q96QH2 718 aa24.05■■□□□ 1.44
SMPD1-210ENST00000534405 FAM13BQ9NYF5 915 aa24.04■■□□□ 1.44
SMPD1-210ENST00000534405 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
SMPD1-210ENST00000534405 PDIA4P13667 645 aaKnown RBP24.03■■□□□ 1.44
SMPD1-210ENST00000534405 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
SMPD1-210ENST00000534405 PPP1R9BQ96SB3 815 aa24.02■■□□□ 1.44
SMPD1-210ENST00000534405 COL3A1P02461 1466 aaPredicted RBP24.01■■□□□ 1.43
SMPD1-210ENST00000534405 FYB1O15117 783 aa24.01■■□□□ 1.43
SMPD1-210ENST00000534405 CCDC173Q0VFZ6 552 aa24.01■■□□□ 1.43
SMPD1-210ENST00000534405 BCL11BQ9C0K0 894 aaPredicted RBP24.01■■□□□ 1.43
SMPD1-210ENST00000534405 PCDHB15Q9Y5E8 787 aa24.01■■□□□ 1.43
SMPD1-210ENST00000534405 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
SMPD1-210ENST00000534405 DMTNQ08495 405 aa24■■□□□ 1.43
SMPD1-210ENST00000534405 NCBP3Q53F19 620 aaKnown RBP24■■□□□ 1.43
SMPD1-210ENST00000534405 UPF2Q9HAU5 1272 aaKnown RBP24■■□□□ 1.43
SMPD1-210ENST00000534405 U2SURPO15042 1029 aaKnown RBP23.99■■□□□ 1.43
SMPD1-210ENST00000534405 BBXQ8WY36 941 aaPredicted RBP23.99■■□□□ 1.43
SMPD1-210ENST00000534405 ZHX1Q9UKY1 873 aaPredicted RBP23.99■■□□□ 1.43
SMPD1-210ENST00000534405 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
SMPD1-210ENST00000534405 NCLP19338 710 aaKnown RBP23.99■■□□□ 1.43
SMPD1-210ENST00000534405 TSR2Q969E8 191 aaKnown RBP23.99■■□□□ 1.43
SMPD1-210ENST00000534405 GAS2L3Q86XJ1 694 aa23.98■■□□□ 1.43
SMPD1-210ENST00000534405 CLTCQ00610 1675 aaKnown RBP23.98■■□□□ 1.43
SMPD1-210ENST00000534405 GTF2E1P29083 439 aaPredicted RBP23.97■■□□□ 1.43
SMPD1-210ENST00000534405 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
SMPD1-210ENST00000534405 TERF2IPQ9NYB0 399 aa23.96■■□□□ 1.43
SMPD1-210ENST00000534405 TRIM35Q9UPQ4 493 aa23.96■■□□□ 1.43
SMPD1-210ENST00000534405 ZMYM3Q14202 1370 aa23.96■■□□□ 1.43
SMPD1-210ENST00000534405 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.43
SMPD1-210ENST00000534405 ANKRD26Q9UPS8 1709 aa23.95■■□□□ 1.42
SMPD1-210ENST00000534405 MSNP26038 577 aaKnown RBP23.94■■□□□ 1.42
SMPD1-210ENST00000534405 CDK19Q9BWU1 502 aa23.94■■□□□ 1.42
SMPD1-210ENST00000534405 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
SMPD1-210ENST00000534405 ARHGEF40Q8TER5 1519 aa23.93■■□□□ 1.42
SMPD1-210ENST00000534405 MED14O60244 1454 aa23.93■■□□□ 1.42
SMPD1-210ENST00000534405 PMFBP1Q8TBY8 1022 aa23.93■■□□□ 1.42
SMPD1-210ENST00000534405 DYNC1I1O14576 645 aa23.92■■□□□ 1.42
SMPD1-210ENST00000534405 EXOSC9Q06265 439 aaKnown RBP23.92■■□□□ 1.42
SMPD1-210ENST00000534405 R3HCC1Q9Y3T6 440 aaKnown RBP23.92■■□□□ 1.42
SMPD1-210ENST00000534405 CABP1Q9NZU7 370 aa23.91■■□□□ 1.42
SMPD1-210ENST00000534405 SPRYD3Q8NCJ5 442 aa23.9■■□□□ 1.42
SMPD1-210ENST00000534405 UQCRHLA0A096LP55 91 aa23.9■■□□□ 1.42
SMPD1-210ENST00000534405 UQCRHP07919 91 aa23.9■■□□□ 1.42
SMPD1-210ENST00000534405 MVPQ14764 893 aaKnown RBP23.9■■□□□ 1.42
SMPD1-210ENST00000534405 ZNF692Q9BU19 519 aaPredicted RBP23.89■■□□□ 1.42
SMPD1-210ENST00000534405 ZSCAN20P17040 1043 aaPredicted RBP23.89■■□□□ 1.41
SMPD1-210ENST00000534405 ZKSCAN2Q63HK3 967 aa23.89■■□□□ 1.41
SMPD1-210ENST00000534405 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.41
SMPD1-210ENST00000534405 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.41
SMPD1-210ENST00000534405 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
SMPD1-210ENST00000534405 PRDM10Q9NQV6 1147 aa23.88■■□□□ 1.41
SMPD1-210ENST00000534405 FBLN1P23142 703 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms